RNA–Protein interactions for RNA: ENST00000489556.5

CNIH3-209, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 5

Gene CNIH3, Length 866 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-209ENST00000489556 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
CNIH3-209ENST00000489556 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
CNIH3-209ENST00000489556 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
CNIH3-209ENST00000489556 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
CNIH3-209ENST00000489556 ABCC9O60706 1549 aa17.21■□□□□ 0.35
CNIH3-209ENST00000489556 DCAF8L2P0C7V8 631 aa16.96■□□□□ 0.31
CNIH3-209ENST00000489556 ZCCHC6Q5VYS8 1495 aaKnown RBP16.77■□□□□ 0.28
CNIH3-209ENST00000489556 NACADO15069 1562 aa16.65■□□□□ 0.26
CNIH3-209ENST00000489556 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
CNIH3-209ENST00000489556 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
CNIH3-209ENST00000489556 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
CNIH3-209ENST00000489556 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
CNIH3-209ENST00000489556 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
CNIH3-209ENST00000489556 UNC13AQ9UPW8 1703 aa16.23■□□□□ 0.19
CNIH3-209ENST00000489556 SHROOM4Q9ULL8 1493 aa16.21■□□□□ 0.19
CNIH3-209ENST00000489556 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
CNIH3-209ENST00000489556 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
CNIH3-209ENST00000489556 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
CNIH3-209ENST00000489556 EIF4G1Q04637 1599 aaKnown RBP15.65■□□□□ 0.1
CNIH3-209ENST00000489556 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
CNIH3-209ENST00000489556 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
CNIH3-209ENST00000489556 SMARCA4P51532 1647 aa15.56■□□□□ 0.08
CNIH3-209ENST00000489556 CC2D2AQ9P2K1 1620 aa15.54■□□□□ 0.08
CNIH3-209ENST00000489556 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
CNIH3-209ENST00000489556 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
CNIH3-209ENST00000489556 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
CNIH3-209ENST00000489556 SUPT5HO00267 1087 aaKnown RBP15.42■□□□□ 0.06
CNIH3-209ENST00000489556 SMARCA2P51531 1590 aa15.41■□□□□ 0.06
CNIH3-209ENST00000489556 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
CNIH3-209ENST00000489556 WIZO95785 1651 aa15.39■□□□□ 0.05
CNIH3-209ENST00000489556 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
CNIH3-209ENST00000489556 NCAPD3P42695 1498 aa15.33■□□□□ 0.04
CNIH3-209ENST00000489556 PEG3Q9GZU2 1588 aa15.32■□□□□ 0.04
CNIH3-209ENST00000489556 HMGXB3Q12766 1538 aa15.27■□□□□ 0.04
CNIH3-209ENST00000489556 FOXD1Q16676 465 aa15.27■□□□□ 0.04
CNIH3-209ENST00000489556 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.03
CNIH3-209ENST00000489556 CCDC88BA6NC98 1476 aa15.05■□□□□ -0
CNIH3-209ENST00000489556 CADPSQ9ULU8 1353 aa14.94□□□□□ -0.02
CNIH3-209ENST00000489556 NESP48681 1621 aa14.93□□□□□ -0.02
CNIH3-209ENST00000489556 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
CNIH3-209ENST00000489556 CFTRP13569 1480 aa14.87□□□□□ -0.03
CNIH3-209ENST00000489556 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
CNIH3-209ENST00000489556 PDS5BQ9NTI5 1447 aa14.85□□□□□ -0.03
CNIH3-209ENST00000489556 PRDM2Q13029 1718 aa14.82□□□□□ -0.04
CNIH3-209ENST00000489556 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
CNIH3-209ENST00000489556 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.04
CNIH3-209ENST00000489556 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
CNIH3-209ENST00000489556 MRC2Q9UBG0 1479 aa14.66□□□□□ -0.06
CNIH3-209ENST00000489556 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
CNIH3-209ENST00000489556 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
CNIH3-209ENST00000489556 POTEDQ86YR6 584 aa14.59□□□□□ -0.07
CNIH3-209ENST00000489556 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.07
CNIH3-209ENST00000489556 URB2Q14146 1524 aaKnown RBP14.58□□□□□ -0.08
CNIH3-209ENST00000489556 DNMBPQ6XZF7 1577 aa14.57□□□□□ -0.08
CNIH3-209ENST00000489556 WDR62O43379 1518 aa14.56□□□□□ -0.08
CNIH3-209ENST00000489556 TOPBP1Q92547 1522 aa14.56□□□□□ -0.08
CNIH3-209ENST00000489556 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
CNIH3-209ENST00000489556 CUX1P39880 1505 aa14.53□□□□□ -0.08
CNIH3-209ENST00000489556 CUX2O14529 1486 aa14.5□□□□□ -0.09
CNIH3-209ENST00000489556 SYNJ1O43426 1573 aa14.5□□□□□ -0.09
CNIH3-209ENST00000489556 TOP2BQ02880 1626 aa14.48□□□□□ -0.09
CNIH3-209ENST00000489556 FGD5Q6ZNL6 1462 aa14.48□□□□□ -0.09
CNIH3-209ENST00000489556 BIVM-ERCC5R4GMW8 1640 aa14.48□□□□□ -0.09
CNIH3-209ENST00000489556 SOGA1O94964 1423 aa14.45□□□□□ -0.1
CNIH3-209ENST00000489556 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
CNIH3-209ENST00000489556 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
CNIH3-209ENST00000489556 RAD54L2Q9Y4B4 1467 aa14.41□□□□□ -0.1
CNIH3-209ENST00000489556 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
CNIH3-209ENST00000489556 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
CNIH3-209ENST00000489556 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
CNIH3-209ENST00000489556 MSH5O43196 834 aa14.31□□□□□ -0.12
CNIH3-209ENST00000489556 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.12
CNIH3-209ENST00000489556 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
CNIH3-209ENST00000489556 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
CNIH3-209ENST00000489556 KIF27Q86VH2 1401 aa14.28□□□□□ -0.12
CNIH3-209ENST00000489556 FAM9AQ8IZU1 332 aaPredicted RBP14.28□□□□□ -0.12
CNIH3-209ENST00000489556 EIF4G3O43432 1585 aaKnown RBP14.27□□□□□ -0.12
CNIH3-209ENST00000489556 GAPVD1Q14C86 1478 aa14.27□□□□□ -0.12
CNIH3-209ENST00000489556 PBRM1Q86U86 1689 aa14.23□□□□□ -0.13
CNIH3-209ENST00000489556 FBLN2P98095 1184 aa14.22□□□□□ -0.13
CNIH3-209ENST00000489556 GRIN2BQ13224 1484 aa14.22□□□□□ -0.13
CNIH3-209ENST00000489556 ABCA5Q8WWZ7 1642 aa14.22□□□□□ -0.13
CNIH3-209ENST00000489556 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
CNIH3-209ENST00000489556 CHMP7Q8WUX9 453 aaPredicted RBP14.17□□□□□ -0.14
CNIH3-209ENST00000489556 SNAPC4Q5SXM2 1469 aa14.17□□□□□ -0.14
CNIH3-209ENST00000489556 CSRNP3Q8WYN3 585 aa14.16□□□□□ -0.14
CNIH3-209ENST00000489556 EEA1Q15075 1411 aa14.15□□□□□ -0.14
CNIH3-209ENST00000489556 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
CNIH3-209ENST00000489556 IGF1RP08069 1367 aa14.14□□□□□ -0.15
CNIH3-209ENST00000489556 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
CNIH3-209ENST00000489556 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
CNIH3-209ENST00000489556 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
CNIH3-209ENST00000489556 CARMIL1Q5VZK9 1371 aa14.11□□□□□ -0.15
CNIH3-209ENST00000489556 CUL7Q14999 1698 aa14.1□□□□□ -0.15
CNIH3-209ENST00000489556 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
CNIH3-209ENST00000489556 SYNJ2O15056 1496 aa14.08□□□□□ -0.16
CNIH3-209ENST00000489556 CHD1O14646 1710 aa14.08□□□□□ -0.16
CNIH3-209ENST00000489556 PPP6R1Q9UPN7 881 aa14.08□□□□□ -0.16
CNIH3-209ENST00000489556 ADAMTS12P58397 1594 aa14.08□□□□□ -0.16
CNIH3-209ENST00000489556 OSCARQ8IYS5 282 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms