RNA–Protein interactions for RNA: ENST00000489059.1

STRIP1-206, Transcript of striatin interacting protein 1, humanhuman

TSL 2

Gene STRIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRIP1-206ENST00000489059 NISCHQ9Y2I1 1504 aa49.92■■■■■ 5.58
STRIP1-206ENST00000489059 CCDC180Q9P1Z9 1646 aa44.25■■■■■ 4.67
STRIP1-206ENST00000489059 ABCC9O60706 1549 aa43.28■■■■■ 4.52
STRIP1-206ENST00000489059 DCAF8L2P0C7V8 631 aa41.71■■■■■ 4.27
STRIP1-206ENST00000489059 RB1CC1Q8TDY2 1594 aa41.66■■■■■ 4.26
STRIP1-206ENST00000489059 NACADO15069 1562 aa41.65■■■■■ 4.26
STRIP1-206ENST00000489059 ZCCHC6Q5VYS8 1495 aaKnown RBP41.6■■■■■ 4.25
STRIP1-206ENST00000489059 MYO15BQ96JP2 1530 aa41.45■■■■■ 4.23
STRIP1-206ENST00000489059 DCAF1Q9Y4B6 1507 aa41.31■■■■■ 4.2
STRIP1-206ENST00000489059 UNC13AQ9UPW8 1703 aa40.59■■■■■ 4.09
STRIP1-206ENST00000489059 PABPN1Q86U42 306 aaKnown RBP eCLIP40.51■■■■■ 4.08
STRIP1-206ENST00000489059 SCRIBQ14160 1630 aa40.42■■■■■ 4.06
STRIP1-206ENST00000489059 BICRAQ9NZM4 1560 aa40.39■■■■■ 4.06
STRIP1-206ENST00000489059 SHROOM4Q9ULL8 1493 aa40■■■■□ 3.99
STRIP1-206ENST00000489059 DNAJC5BQ9UF47 199 aa39.68■■■■□ 3.94
STRIP1-206ENST00000489059 EIF4G1Q04637 1599 aaKnown RBP39.32■■■■□ 3.88
STRIP1-206ENST00000489059 CC2D2AQ9P2K1 1620 aa39.12■■■■□ 3.85
STRIP1-206ENST00000489059 CECR2Q9BXF3 1484 aa38.89■■■■□ 3.82
STRIP1-206ENST00000489059 SMARCA4P51532 1647 aa38.67■■■■□ 3.78
STRIP1-206ENST00000489059 BAZ1AQ9NRL2 1556 aaPredicted RBP38.67■■■■□ 3.78
STRIP1-206ENST00000489059 ATAD2BQ9ULI0 1458 aa38.49■■■■□ 3.75
STRIP1-206ENST00000489059 MROH2BQ7Z745 1585 aa38.48■■■■□ 3.75
STRIP1-206ENST00000489059 NCAPD3P42695 1498 aa38.47■■■■□ 3.75
STRIP1-206ENST00000489059 SMARCA2P51531 1590 aa38.42■■■■□ 3.74
STRIP1-206ENST00000489059 PEG3Q9GZU2 1588 aa38.31■■■■□ 3.72
STRIP1-206ENST00000489059 HMGXB3Q12766 1538 aa38.24■■■■□ 3.71
STRIP1-206ENST00000489059 BAZ1BQ9UIG0 1483 aaKnown RBP38.17■■■■□ 3.7
STRIP1-206ENST00000489059 RSF1Q96T23 1441 aaPredicted RBP38.11■■■■□ 3.69
STRIP1-206ENST00000489059 WIZO95785 1651 aa38.02■■■■□ 3.68
STRIP1-206ENST00000489059 TOP2AP11388 1531 aaKnown RBP37.66■■■■□ 3.62
STRIP1-206ENST00000489059 NESP48681 1621 aa37.48■■■■□ 3.59
STRIP1-206ENST00000489059 LAMC3Q9Y6N6 1575 aa37.38■■■■□ 3.58
STRIP1-206ENST00000489059 CADPSQ9ULU8 1353 aa37.36■■■■□ 3.57
STRIP1-206ENST00000489059 ERCC6Q03468 1493 aa37.3■■■■□ 3.56
STRIP1-206ENST00000489059 CCDC88BA6NC98 1476 aa37.24■■■■□ 3.55
STRIP1-206ENST00000489059 SUPT5HO00267 1087 aaKnown RBP37.23■■■■□ 3.55
STRIP1-206ENST00000489059 PDS5BQ9NTI5 1447 aa37.18■■■■□ 3.54
STRIP1-206ENST00000489059 CFTRP13569 1480 aa37.15■■■■□ 3.54
STRIP1-206ENST00000489059 KIF21AQ7Z4S6 1674 aa36.95■■■■□ 3.51
STRIP1-206ENST00000489059 FANCD2Q9BXW9 1451 aa36.91■■■■□ 3.5
STRIP1-206ENST00000489059 CUX2O14529 1486 aa36.88■■■■□ 3.49
STRIP1-206ENST00000489059 THOC2Q8NI27 1593 aaKnown RBP36.85■■■■□ 3.49
STRIP1-206ENST00000489059 CEP164Q9UPV0 1460 aa36.84■■■■□ 3.49
STRIP1-206ENST00000489059 MRC2Q9UBG0 1479 aa36.77■■■■□ 3.48
STRIP1-206ENST00000489059 PRDM2Q13029 1718 aa36.71■■■■□ 3.47
STRIP1-206ENST00000489059 WDR62O43379 1518 aa36.63■■■■□ 3.45
STRIP1-206ENST00000489059 URB2Q14146 1524 aaKnown RBP36.53■■■■□ 3.44
STRIP1-206ENST00000489059 ABCC8Q09428 1581 aa36.33■■■■□ 3.41
STRIP1-206ENST00000489059 TOPBP1Q92547 1522 aa36.32■■■■□ 3.4
STRIP1-206ENST00000489059 DNMBPQ6XZF7 1577 aa36.27■■■■□ 3.4
STRIP1-206ENST00000489059 CUX1P39880 1505 aa36.08■■■■□ 3.37
STRIP1-206ENST00000489059 IFT140Q96RY7 1462 aa36.08■■■■□ 3.37
STRIP1-206ENST00000489059 POLA1P09884 1462 aaPredicted RBP36.02■■■■□ 3.36
STRIP1-206ENST00000489059 FGD5Q6ZNL6 1462 aa35.95■■■■□ 3.35
STRIP1-206ENST00000489059 WRNQ14191 1432 aaPredicted RBP eCLIP35.91■■■■□ 3.34
STRIP1-206ENST00000489059 SOGA1O94964 1423 aa35.91■■■■□ 3.34
STRIP1-206ENST00000489059 ZNF608Q9ULD9 1512 aaPredicted RBP35.9■■■■□ 3.34
STRIP1-206ENST00000489059 TARBP1Q13395 1621 aaKnown RBP35.89■■■■□ 3.34
STRIP1-206ENST00000489059 RAD54L2Q9Y4B4 1467 aa35.87■■■■□ 3.33
STRIP1-206ENST00000489059 TOP2BQ02880 1626 aa35.78■■■■□ 3.32
STRIP1-206ENST00000489059 SYNJ1O43426 1573 aa35.77■■■■□ 3.32
STRIP1-206ENST00000489059 BIVM-ERCC5R4GMW8 1640 aa35.75■■■■□ 3.31
STRIP1-206ENST00000489059 AQRO60306 1485 aaKnown RBP eCLIP35.73■■■■□ 3.31
STRIP1-206ENST00000489059 EIF4G3O43432 1585 aaKnown RBP35.71■■■■□ 3.31
STRIP1-206ENST00000489059 TDRD9Q8NDG6 1382 aaKnown RBP35.7■■■■□ 3.31
STRIP1-206ENST00000489059 DNAJC5Q9H3Z4 198 aa35.66■■■■□ 3.3
STRIP1-206ENST00000489059 ABCA10Q8WWZ4 1543 aa35.62■■■■□ 3.29
STRIP1-206ENST00000489059 WDR97A6NE52 1622 aa35.61■■■■□ 3.29
STRIP1-206ENST00000489059 GAPVD1Q14C86 1478 aa35.48■■■■□ 3.27
STRIP1-206ENST00000489059 GRIN2BQ13224 1484 aa35.46■■■■□ 3.27
STRIP1-206ENST00000489059 ABCA5Q8WWZ7 1642 aa35.42■■■■□ 3.26
STRIP1-206ENST00000489059 OSCARQ8IYS5 282 aa35.41■■■■□ 3.26
STRIP1-206ENST00000489059 SNAPC4Q5SXM2 1469 aa35.39■■■■□ 3.26
STRIP1-206ENST00000489059 MAGI1Q96QZ7 1491 aaPredicted RBP35.34■■■■□ 3.25
STRIP1-206ENST00000489059 FBLN2P98095 1184 aa35.29■■■■□ 3.24
STRIP1-206ENST00000489059 PBRM1Q86U86 1689 aa35.29■■■■□ 3.24
STRIP1-206ENST00000489059 CHMP7Q8WUX9 453 aaPredicted RBP35.22■■■■□ 3.23
STRIP1-206ENST00000489059 SYNJ2O15056 1496 aa35.21■■■■□ 3.23
STRIP1-206ENST00000489059 CHD1O14646 1710 aa35.19■■■■□ 3.22
STRIP1-206ENST00000489059 ERICH3Q5RHP9 1530 aa35.17■■■■□ 3.22
STRIP1-206ENST00000489059 TRIM41Q8WV44 630 aa35.17■■■■□ 3.22
STRIP1-206ENST00000489059 KIF27Q86VH2 1401 aa35.16■■■■□ 3.22
STRIP1-206ENST00000489059 FHAD1B1AJZ9 1412 aa35.08■■■■□ 3.21
STRIP1-206ENST00000489059 ADAMTS12P58397 1594 aa35.08■■■■□ 3.21
STRIP1-206ENST00000489059 IGF1RP08069 1367 aa35.03■■■■□ 3.2
STRIP1-206ENST00000489059 GRIN2AQ12879 1464 aa34.99■■■■□ 3.19
STRIP1-206ENST00000489059 CLASP1Q7Z460 1538 aa34.89■■■■□ 3.18
STRIP1-206ENST00000489059 RUSC2Q8N2Y8 1516 aa34.86■■■■□ 3.17
STRIP1-206ENST00000489059 NUP160Q12769 1436 aa34.85■■■■□ 3.17
STRIP1-206ENST00000489059 CUL7Q14999 1698 aa34.83■■■■□ 3.17
STRIP1-206ENST00000489059 CHIC1Q5VXU3 224 aa34.82■■■■□ 3.16
STRIP1-206ENST00000489059 CARMIL1Q5VZK9 1371 aa34.82■■■■□ 3.16
STRIP1-206ENST00000489059 CEP170Q5SW79 1584 aa34.79■■■■□ 3.16
STRIP1-206ENST00000489059 ARHGEF11O15085 1522 aa34.78■■■■□ 3.16
STRIP1-206ENST00000489059 RIMBP3CA6NJZ7 1639 aa34.73■■■■□ 3.15
STRIP1-206ENST00000489059 RIMBP3BA6NNM3 1639 aa34.73■■■■□ 3.15
STRIP1-206ENST00000489059 RIMBP3Q9UFD9 1639 aa34.73■■■■□ 3.15
STRIP1-206ENST00000489059 RAPGEF2Q9Y4G8 1499 aa34.6■■■■□ 3.13
STRIP1-206ENST00000489059 EEA1Q15075 1411 aa34.55■■■■□ 3.12
STRIP1-206ENST00000489059 KIAA0586Q9BVV6 1533 aa34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms