RNA–Protein interactions for RNA: ENST00000488965.1

SCP2-212, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-212ENST00000488965 NISCHQ9Y2I1 1504 aa14.68□□□□□ -0.06
SCP2-212ENST00000488965 CCDC180Q9P1Z9 1646 aa12.87□□□□□ -0.35
SCP2-212ENST00000488965 DCAF8L2P0C7V8 631 aa12.49□□□□□ -0.41
SCP2-212ENST00000488965 ZCCHC6Q5VYS8 1495 aaKnown RBP12.43□□□□□ -0.42
SCP2-212ENST00000488965 DCAF1Q9Y4B6 1507 aa12.26□□□□□ -0.45
SCP2-212ENST00000488965 SHROOM4Q9ULL8 1493 aa12.11□□□□□ -0.47
SCP2-212ENST00000488965 MYO15BQ96JP2 1530 aa12.05□□□□□ -0.48
SCP2-212ENST00000488965 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
SCP2-212ENST00000488965 NACADO15069 1562 aa11.81□□□□□ -0.52
SCP2-212ENST00000488965 ABCC9O60706 1549 aa11.71□□□□□ -0.54
SCP2-212ENST00000488965 SCRIBQ14160 1630 aa11.66□□□□□ -0.54
SCP2-212ENST00000488965 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
SCP2-212ENST00000488965 UNC13AQ9UPW8 1703 aa11.6□□□□□ -0.55
SCP2-212ENST00000488965 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
SCP2-212ENST00000488965 RSF1Q96T23 1441 aaPredicted RBP11.41□□□□□ -0.58
SCP2-212ENST00000488965 BICRAQ9NZM4 1560 aa11.36□□□□□ -0.59
SCP2-212ENST00000488965 MROH2BQ7Z745 1585 aa11.32□□□□□ -0.6
SCP2-212ENST00000488965 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
SCP2-212ENST00000488965 BAZ1AQ9NRL2 1556 aaPredicted RBP11.32□□□□□ -0.6
SCP2-212ENST00000488965 FAM9AQ8IZU1 332 aaPredicted RBP11.29□□□□□ -0.6
SCP2-212ENST00000488965 SMARCA4P51532 1647 aa11.28□□□□□ -0.6
SCP2-212ENST00000488965 WIZO95785 1651 aa11.28□□□□□ -0.6
SCP2-212ENST00000488965 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
SCP2-212ENST00000488965 PEG3Q9GZU2 1588 aa11.23□□□□□ -0.61
SCP2-212ENST00000488965 CHIC1Q5VXU3 224 aa11.19□□□□□ -0.62
SCP2-212ENST00000488965 TOP2AP11388 1531 aaKnown RBP11.19□□□□□ -0.62
SCP2-212ENST00000488965 SMARCA2P51531 1590 aa11.1□□□□□ -0.63
SCP2-212ENST00000488965 PCGF6Q9BYE7 350 aa11.08□□□□□ -0.64
SCP2-212ENST00000488965 TTBK1Q5TCY1 1321 aaPredicted RBP11.06□□□□□ -0.64
SCP2-212ENST00000488965 TRIM41Q8WV44 630 aa11.05□□□□□ -0.64
SCP2-212ENST00000488965 CCDC88BA6NC98 1476 aa10.99□□□□□ -0.65
SCP2-212ENST00000488965 LOC105371045A0A1W2PR82 267 aa10.98□□□□□ -0.65
SCP2-212ENST00000488965 ATAD2BQ9ULI0 1458 aa10.96□□□□□ -0.66
SCP2-212ENST00000488965 RANGAP1P46060 587 aaPredicted RBP10.94□□□□□ -0.66
SCP2-212ENST00000488965 HMGXB3Q12766 1538 aa10.94□□□□□ -0.66
SCP2-212ENST00000488965 PPARGC1BQ86YN6 1023 aaKnown RBP10.9□□□□□ -0.66
SCP2-212ENST00000488965 PABPN1Q86U42 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
SCP2-212ENST00000488965 PRDM2Q13029 1718 aa10.88□□□□□ -0.67
SCP2-212ENST00000488965 NCAPD3P42695 1498 aa10.86□□□□□ -0.67
SCP2-212ENST00000488965 BAZ1BQ9UIG0 1483 aaKnown RBP10.86□□□□□ -0.67
SCP2-212ENST00000488965 ABCC8Q09428 1581 aa10.82□□□□□ -0.68
SCP2-212ENST00000488965 BIVM-ERCC5R4GMW8 1640 aa10.78□□□□□ -0.68
SCP2-212ENST00000488965 UBTFP17480 764 aaKnown RBP10.77□□□□□ -0.69
SCP2-212ENST00000488965 SYNJ1O43426 1573 aa10.75□□□□□ -0.69
SCP2-212ENST00000488965 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
SCP2-212ENST00000488965 APLP2Q06481 763 aa10.72□□□□□ -0.69
SCP2-212ENST00000488965 CC2D2AQ9P2K1 1620 aa10.7□□□□□ -0.7
SCP2-212ENST00000488965 EEA1Q15075 1411 aa10.7□□□□□ -0.7
SCP2-212ENST00000488965 WRNQ14191 1432 aaPredicted RBP eCLIP10.68□□□□□ -0.7
SCP2-212ENST00000488965 CFTRP13569 1480 aa10.67□□□□□ -0.7
SCP2-212ENST00000488965 KIF21BO75037 1637 aa10.66□□□□□ -0.7
SCP2-212ENST00000488965 CCER1Q8TC90 406 aaPredicted RBP10.61□□□□□ -0.71
SCP2-212ENST00000488965 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
SCP2-212ENST00000488965 SOGA1O94964 1423 aa10.61□□□□□ -0.71
SCP2-212ENST00000488965 TRIM26Q12899 539 aaPredicted RBP10.59□□□□□ -0.71
SCP2-212ENST00000488965 CUX1P39880 1505 aa10.59□□□□□ -0.71
SCP2-212ENST00000488965 RUSC2Q8N2Y8 1516 aa10.58□□□□□ -0.72
SCP2-212ENST00000488965 HRCP23327 699 aa10.57□□□□□ -0.72
SCP2-212ENST00000488965 TNIKQ9UKE5 1360 aa10.53□□□□□ -0.72
SCP2-212ENST00000488965 GOLGA3Q08378 1498 aa10.52□□□□□ -0.72
SCP2-212ENST00000488965 ERICH3Q5RHP9 1530 aa10.52□□□□□ -0.72
SCP2-212ENST00000488965 CEP164Q9UPV0 1460 aa10.51□□□□□ -0.73
SCP2-212ENST00000488965 CADPSQ9ULU8 1353 aa10.5□□□□□ -0.73
SCP2-212ENST00000488965 LAMC3Q9Y6N6 1575 aa10.5□□□□□ -0.73
SCP2-212ENST00000488965 WDR97A6NE52 1622 aa10.48□□□□□ -0.73
SCP2-212ENST00000488965 PRXQ9BXM0 1461 aa10.47□□□□□ -0.73
SCP2-212ENST00000488965 CEP162Q5TB80 1403 aa10.46□□□□□ -0.73
SCP2-212ENST00000488965 CSRNP3Q8WYN3 585 aa10.46□□□□□ -0.73
SCP2-212ENST00000488965 HNRNPUL2Q1KMD3 747 aaKnown RBP10.45□□□□□ -0.74
SCP2-212ENST00000488965 DNMBPQ6XZF7 1577 aa10.45□□□□□ -0.74
SCP2-212ENST00000488965 PELP1Q8IZL8 1130 aaKnown RBP10.45□□□□□ -0.74
SCP2-212ENST00000488965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.44□□□□□ -0.74
SCP2-212ENST00000488965 ITGAEP38570 1179 aa10.44□□□□□ -0.74
SCP2-212ENST00000488965 ZEB1P37275 1124 aaPredicted RBP10.42□□□□□ -0.74
SCP2-212ENST00000488965 RAPGEF2Q9Y4G8 1499 aa10.41□□□□□ -0.74
SCP2-212ENST00000488965 FANCD2Q9BXW9 1451 aa10.41□□□□□ -0.74
SCP2-212ENST00000488965 KIF21AQ7Z4S6 1674 aa10.39□□□□□ -0.75
SCP2-212ENST00000488965 FGD5Q6ZNL6 1462 aa10.38□□□□□ -0.75
SCP2-212ENST00000488965 KIF27Q86VH2 1401 aa10.37□□□□□ -0.75
SCP2-212ENST00000488965 TOPBP1Q92547 1522 aa10.36□□□□□ -0.75
SCP2-212ENST00000488965 ABCA10Q8WWZ4 1543 aa10.36□□□□□ -0.75
SCP2-212ENST00000488965 NESP48681 1621 aa10.35□□□□□ -0.75
SCP2-212ENST00000488965 ABCA5Q8WWZ7 1642 aa10.35□□□□□ -0.75
SCP2-212ENST00000488965 CUL7Q14999 1698 aa10.34□□□□□ -0.75
SCP2-212ENST00000488965 URB2Q14146 1524 aaKnown RBP10.32□□□□□ -0.76
SCP2-212ENST00000488965 POLA1P09884 1462 aaPredicted RBP10.32□□□□□ -0.76
SCP2-212ENST00000488965 YTHDC1Q96MU7 727 aaKnown RBP10.31□□□□□ -0.76
SCP2-212ENST00000488965 CTTNBP2Q8WZ74 1663 aa10.31□□□□□ -0.76
SCP2-212ENST00000488965 TARBP1Q13395 1621 aaKnown RBP10.3□□□□□ -0.76
SCP2-212ENST00000488965 VPS8Q8N3P4 1428 aa10.3□□□□□ -0.76
SCP2-212ENST00000488965 CLIP1P30622 1438 aa10.3□□□□□ -0.76
SCP2-212ENST00000488965 ARAP1Q96P48 1450 aa10.3□□□□□ -0.76
SCP2-212ENST00000488965 CUX2O14529 1486 aa10.28□□□□□ -0.76
SCP2-212ENST00000488965 IGF1RP08069 1367 aa10.28□□□□□ -0.76
SCP2-212ENST00000488965 PBRM1Q86U86 1689 aa10.25□□□□□ -0.77
SCP2-212ENST00000488965 PDS5BQ9NTI5 1447 aa10.25□□□□□ -0.77
SCP2-212ENST00000488965 MYT1Q01538 1121 aa10.24□□□□□ -0.77
SCP2-212ENST00000488965 P3H3Q8IVL6 736 aa10.24□□□□□ -0.77
SCP2-212ENST00000488965 ARHGAP35Q9NRY4 1499 aa10.23□□□□□ -0.77
SCP2-212ENST00000488965 RAD54L2Q9Y4B4 1467 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms