RNA–Protein interactions for RNA: ENST00000488584.1

LINC00886-203, long intergenic non-protein coding RNA 886, humanhuman

TSL 4

Gene LINC00886, Length 601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00886-203ENST00000488584 NISCHQ9Y2I1 1504 aa30.4■■■□□ 2.46
LINC00886-203ENST00000488584 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
LINC00886-203ENST00000488584 ABCC9O60706 1549 aa25.78■■□□□ 1.72
LINC00886-203ENST00000488584 ZCCHC6Q5VYS8 1495 aaKnown RBP25.36■■□□□ 1.65
LINC00886-203ENST00000488584 DCAF8L2P0C7V8 631 aa25.28■■□□□ 1.64
LINC00886-203ENST00000488584 MYO15BQ96JP2 1530 aa25.27■■□□□ 1.64
LINC00886-203ENST00000488584 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
LINC00886-203ENST00000488584 NACADO15069 1562 aa25.19■■□□□ 1.62
LINC00886-203ENST00000488584 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
LINC00886-203ENST00000488584 SCRIBQ14160 1630 aa24.34■■□□□ 1.49
LINC00886-203ENST00000488584 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
LINC00886-203ENST00000488584 PABPN1Q86U42 306 aaKnown RBP eCLIP24.24■■□□□ 1.47
LINC00886-203ENST00000488584 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
LINC00886-203ENST00000488584 BICRAQ9NZM4 1560 aa24.19■■□□□ 1.46
LINC00886-203ENST00000488584 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
LINC00886-203ENST00000488584 EIF4G1Q04637 1599 aaKnown RBP23.56■■□□□ 1.36
LINC00886-203ENST00000488584 BAZ1AQ9NRL2 1556 aaPredicted RBP23.54■■□□□ 1.36
LINC00886-203ENST00000488584 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
LINC00886-203ENST00000488584 DNAJC5BQ9UF47 199 aa23.38■■□□□ 1.33
LINC00886-203ENST00000488584 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
LINC00886-203ENST00000488584 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
LINC00886-203ENST00000488584 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.33
LINC00886-203ENST00000488584 SMARCA2P51531 1590 aa23.3■■□□□ 1.32
LINC00886-203ENST00000488584 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
LINC00886-203ENST00000488584 ATAD2BQ9ULI0 1458 aa23.29■■□□□ 1.32
LINC00886-203ENST00000488584 PEG3Q9GZU2 1588 aa23.27■■□□□ 1.32
LINC00886-203ENST00000488584 HMGXB3Q12766 1538 aa23.12■■□□□ 1.29
LINC00886-203ENST00000488584 BAZ1BQ9UIG0 1483 aaKnown RBP23.09■■□□□ 1.29
LINC00886-203ENST00000488584 WIZO95785 1651 aa23.04■■□□□ 1.28
LINC00886-203ENST00000488584 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
LINC00886-203ENST00000488584 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
LINC00886-203ENST00000488584 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
LINC00886-203ENST00000488584 CADPSQ9ULU8 1353 aa22.64■■□□□ 1.22
LINC00886-203ENST00000488584 CFTRP13569 1480 aa22.55■■□□□ 1.2
LINC00886-203ENST00000488584 LAMC3Q9Y6N6 1575 aa22.52■■□□□ 1.2
LINC00886-203ENST00000488584 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
LINC00886-203ENST00000488584 NESP48681 1621 aa22.39■■□□□ 1.18
LINC00886-203ENST00000488584 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
LINC00886-203ENST00000488584 ERCC6Q03468 1493 aa22.26■■□□□ 1.15
LINC00886-203ENST00000488584 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
LINC00886-203ENST00000488584 PRDM2Q13029 1718 aa22.17■■□□□ 1.14
LINC00886-203ENST00000488584 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
LINC00886-203ENST00000488584 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
LINC00886-203ENST00000488584 KIF21AQ7Z4S6 1674 aa22.04■■□□□ 1.12
LINC00886-203ENST00000488584 WRNQ14191 1432 aaPredicted RBP eCLIP22■■□□□ 1.11
LINC00886-203ENST00000488584 WDR62O43379 1518 aa21.97■■□□□ 1.11
LINC00886-203ENST00000488584 URB2Q14146 1524 aaKnown RBP21.97■■□□□ 1.11
LINC00886-203ENST00000488584 CUX2O14529 1486 aa21.95■■□□□ 1.1
LINC00886-203ENST00000488584 TOPBP1Q92547 1522 aa21.95■■□□□ 1.1
LINC00886-203ENST00000488584 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
LINC00886-203ENST00000488584 THOC2Q8NI27 1593 aaKnown RBP21.93■■□□□ 1.1
LINC00886-203ENST00000488584 CUX1P39880 1505 aa21.88■■□□□ 1.09
LINC00886-203ENST00000488584 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
LINC00886-203ENST00000488584 TOP2BQ02880 1626 aa21.83■■□□□ 1.08
LINC00886-203ENST00000488584 CHIC1Q5VXU3 224 aa21.81■■□□□ 1.08
LINC00886-203ENST00000488584 SOGA1O94964 1423 aa21.8■■□□□ 1.08
LINC00886-203ENST00000488584 POLA1P09884 1462 aaPredicted RBP21.78■■□□□ 1.08
LINC00886-203ENST00000488584 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
LINC00886-203ENST00000488584 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.07
LINC00886-203ENST00000488584 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.07
LINC00886-203ENST00000488584 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
LINC00886-203ENST00000488584 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
LINC00886-203ENST00000488584 RAD54L2Q9Y4B4 1467 aa21.64■■□□□ 1.06
LINC00886-203ENST00000488584 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
LINC00886-203ENST00000488584 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
LINC00886-203ENST00000488584 TDRD9Q8NDG6 1382 aaKnown RBP21.58■■□□□ 1.04
LINC00886-203ENST00000488584 KIF27Q86VH2 1401 aa21.56■■□□□ 1.04
LINC00886-203ENST00000488584 ZNF608Q9ULD9 1512 aaPredicted RBP21.52■■□□□ 1.04
LINC00886-203ENST00000488584 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.03
LINC00886-203ENST00000488584 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.03
LINC00886-203ENST00000488584 EEA1Q15075 1411 aa21.47■■□□□ 1.03
LINC00886-203ENST00000488584 GRIN2BQ13224 1484 aa21.47■■□□□ 1.03
LINC00886-203ENST00000488584 IGF1RP08069 1367 aa21.45■■□□□ 1.02
LINC00886-203ENST00000488584 ERICH3Q5RHP9 1530 aa21.41■■□□□ 1.02
LINC00886-203ENST00000488584 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
LINC00886-203ENST00000488584 ABCA5Q8WWZ7 1642 aa21.4■■□□□ 1.02
LINC00886-203ENST00000488584 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
LINC00886-203ENST00000488584 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
LINC00886-203ENST00000488584 CHMP7Q8WUX9 453 aaPredicted RBP21.33■■□□□ 1.01
LINC00886-203ENST00000488584 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
LINC00886-203ENST00000488584 CARMIL1Q5VZK9 1371 aa21.31■■□□□ 1
LINC00886-203ENST00000488584 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
LINC00886-203ENST00000488584 SYNJ2O15056 1496 aa21.27■■□□□ 1
LINC00886-203ENST00000488584 SNAPC4Q5SXM2 1469 aa21.27■■□□□ 1
LINC00886-203ENST00000488584 FBLN2P98095 1184 aa21.24■□□□□ 0.99
LINC00886-203ENST00000488584 OSCARQ8IYS5 282 aa21.24■□□□□ 0.99
LINC00886-203ENST00000488584 FAM9AQ8IZU1 332 aaPredicted RBP21.22■□□□□ 0.99
LINC00886-203ENST00000488584 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
LINC00886-203ENST00000488584 PRXQ9BXM0 1461 aa21.21■□□□□ 0.99
LINC00886-203ENST00000488584 CUL7Q14999 1698 aa21.21■□□□□ 0.99
LINC00886-203ENST00000488584 RAPGEF2Q9Y4G8 1499 aa21.2■□□□□ 0.98
LINC00886-203ENST00000488584 ADAMTS12P58397 1594 aa21.15■□□□□ 0.98
LINC00886-203ENST00000488584 GRIN2AQ12879 1464 aa21.14■□□□□ 0.98
LINC00886-203ENST00000488584 NUP160Q12769 1436 aa21.08■□□□□ 0.97
LINC00886-203ENST00000488584 KIF21BO75037 1637 aa21.04■□□□□ 0.96
LINC00886-203ENST00000488584 KIAA0586Q9BVV6 1533 aa21.02■□□□□ 0.96
LINC00886-203ENST00000488584 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
LINC00886-203ENST00000488584 GOLGA3Q08378 1498 aa21■□□□□ 0.95
LINC00886-203ENST00000488584 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
LINC00886-203ENST00000488584 CHD1O14646 1710 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms