RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 NISCHQ9Y2I1 1504 aa14.89□□□□□ -0.03
RN7SL561P-201ENST00000488553 CCDC180Q9P1Z9 1646 aa12.83□□□□□ -0.36
RN7SL561P-201ENST00000488553 ZCCHC6Q5VYS8 1495 aaKnown RBP12.51□□□□□ -0.41
RN7SL561P-201ENST00000488553 DCAF1Q9Y4B6 1507 aa12.31□□□□□ -0.44
RN7SL561P-201ENST00000488553 DCAF8L2P0C7V8 631 aa12.29□□□□□ -0.44
RN7SL561P-201ENST00000488553 SHROOM4Q9ULL8 1493 aa12.25□□□□□ -0.45
RN7SL561P-201ENST00000488553 MYO15BQ96JP2 1530 aa12.11□□□□□ -0.47
RN7SL561P-201ENST00000488553 ABCC9O60706 1549 aa12.06□□□□□ -0.48
RN7SL561P-201ENST00000488553 NACADO15069 1562 aa11.96□□□□□ -0.49
RN7SL561P-201ENST00000488553 SUPT5HO00267 1087 aaKnown RBP11.9□□□□□ -0.5
RN7SL561P-201ENST00000488553 SCRIBQ14160 1630 aa11.82□□□□□ -0.52
RN7SL561P-201ENST00000488553 RB1CC1Q8TDY2 1594 aa11.81□□□□□ -0.52
RN7SL561P-201ENST00000488553 RSF1Q96T23 1441 aaPredicted RBP11.63□□□□□ -0.55
RN7SL561P-201ENST00000488553 CECR2Q9BXF3 1484 aa11.57□□□□□ -0.56
RN7SL561P-201ENST00000488553 CHIC1Q5VXU3 224 aa11.51□□□□□ -0.57
RN7SL561P-201ENST00000488553 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
RN7SL561P-201ENST00000488553 UNC13AQ9UPW8 1703 aa11.49□□□□□ -0.57
RN7SL561P-201ENST00000488553 BICRAQ9NZM4 1560 aa11.48□□□□□ -0.57
RN7SL561P-201ENST00000488553 PABPN1Q86U42 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
RN7SL561P-201ENST00000488553 BAZ1AQ9NRL2 1556 aaPredicted RBP11.45□□□□□ -0.58
RN7SL561P-201ENST00000488553 WIZO95785 1651 aa11.38□□□□□ -0.59
RN7SL561P-201ENST00000488553 SMARCA4P51532 1647 aa11.36□□□□□ -0.59
RN7SL561P-201ENST00000488553 TOP2AP11388 1531 aaKnown RBP11.28□□□□□ -0.6
RN7SL561P-201ENST00000488553 PEG3Q9GZU2 1588 aa11.24□□□□□ -0.61
RN7SL561P-201ENST00000488553 CCDC88BA6NC98 1476 aa11.22□□□□□ -0.61
RN7SL561P-201ENST00000488553 ATAD2BQ9ULI0 1458 aa11.19□□□□□ -0.62
RN7SL561P-201ENST00000488553 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
RN7SL561P-201ENST00000488553 SMARCA2P51531 1590 aa11.17□□□□□ -0.62
RN7SL561P-201ENST00000488553 EIF4G1Q04637 1599 aaKnown RBP11.12□□□□□ -0.63
RN7SL561P-201ENST00000488553 BAZ1BQ9UIG0 1483 aaKnown RBP11.11□□□□□ -0.63
RN7SL561P-201ENST00000488553 NCAPD3P42695 1498 aa11.1□□□□□ -0.63
RN7SL561P-201ENST00000488553 LOC105371045A0A1W2PR82 267 aa11.08□□□□□ -0.64
RN7SL561P-201ENST00000488553 HMGXB3Q12766 1538 aa11.02□□□□□ -0.65
RN7SL561P-201ENST00000488553 FAM9AQ8IZU1 332 aaPredicted RBP10.98□□□□□ -0.65
RN7SL561P-201ENST00000488553 ABCC8Q09428 1581 aa10.97□□□□□ -0.65
RN7SL561P-201ENST00000488553 WRNQ14191 1432 aaPredicted RBP eCLIP10.92□□□□□ -0.66
RN7SL561P-201ENST00000488553 CC2D2AQ9P2K1 1620 aa10.89□□□□□ -0.67
RN7SL561P-201ENST00000488553 CFTRP13569 1480 aa10.87□□□□□ -0.67
RN7SL561P-201ENST00000488553 SOGA1O94964 1423 aa10.85□□□□□ -0.67
RN7SL561P-201ENST00000488553 EEA1Q15075 1411 aa10.85□□□□□ -0.67
RN7SL561P-201ENST00000488553 CSRNP3Q8WYN3 585 aa10.84□□□□□ -0.67
RN7SL561P-201ENST00000488553 SYNJ1O43426 1573 aa10.84□□□□□ -0.67
RN7SL561P-201ENST00000488553 CADPSQ9ULU8 1353 aa10.82□□□□□ -0.68
RN7SL561P-201ENST00000488553 RUSC2Q8N2Y8 1516 aa10.81□□□□□ -0.68
RN7SL561P-201ENST00000488553 EHMT2Q96KQ7 1210 aa10.79□□□□□ -0.68
RN7SL561P-201ENST00000488553 TOP2BQ02880 1626 aa10.78□□□□□ -0.68
RN7SL561P-201ENST00000488553 BIVM-ERCC5R4GMW8 1640 aa10.74□□□□□ -0.69
RN7SL561P-201ENST00000488553 CUX1P39880 1505 aa10.74□□□□□ -0.69
RN7SL561P-201ENST00000488553 TNIKQ9UKE5 1360 aa10.73□□□□□ -0.69
RN7SL561P-201ENST00000488553 PCGF6Q9BYE7 350 aa10.7□□□□□ -0.7
RN7SL561P-201ENST00000488553 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
RN7SL561P-201ENST00000488553 UBTFP17480 764 aaKnown RBP10.68□□□□□ -0.7
RN7SL561P-201ENST00000488553 TRIM26Q12899 539 aaPredicted RBP10.68□□□□□ -0.7
RN7SL561P-201ENST00000488553 DNAJC5BQ9UF47 199 aa10.68□□□□□ -0.7
RN7SL561P-201ENST00000488553 CEP164Q9UPV0 1460 aa10.68□□□□□ -0.7
RN7SL561P-201ENST00000488553 PRDM2Q13029 1718 aa10.67□□□□□ -0.7
RN7SL561P-201ENST00000488553 FANCD2Q9BXW9 1451 aa10.67□□□□□ -0.7
RN7SL561P-201ENST00000488553 KIF21BO75037 1637 aa10.66□□□□□ -0.7
RN7SL561P-201ENST00000488553 CEP162Q5TB80 1403 aa10.65□□□□□ -0.7
RN7SL561P-201ENST00000488553 NESP48681 1621 aa10.64□□□□□ -0.71
RN7SL561P-201ENST00000488553 KIF27Q86VH2 1401 aa10.63□□□□□ -0.71
RN7SL561P-201ENST00000488553 LAMC3Q9Y6N6 1575 aa10.62□□□□□ -0.71
RN7SL561P-201ENST00000488553 PRXQ9BXM0 1461 aa10.61□□□□□ -0.71
RN7SL561P-201ENST00000488553 RAPGEF2Q9Y4G8 1499 aa10.61□□□□□ -0.71
RN7SL561P-201ENST00000488553 FGD5Q6ZNL6 1462 aa10.59□□□□□ -0.71
RN7SL561P-201ENST00000488553 PDS5BQ9NTI5 1447 aa10.58□□□□□ -0.72
RN7SL561P-201ENST00000488553 IGF1RP08069 1367 aa10.58□□□□□ -0.72
RN7SL561P-201ENST00000488553 ERICH3Q5RHP9 1530 aa10.57□□□□□ -0.72
RN7SL561P-201ENST00000488553 DNMBPQ6XZF7 1577 aa10.56□□□□□ -0.72
RN7SL561P-201ENST00000488553 TOPBP1Q92547 1522 aa10.56□□□□□ -0.72
RN7SL561P-201ENST00000488553 CUX2O14529 1486 aa10.55□□□□□ -0.72
RN7SL561P-201ENST00000488553 CLIP1P30622 1438 aa10.54□□□□□ -0.72
RN7SL561P-201ENST00000488553 HRCP23327 699 aa10.53□□□□□ -0.72
RN7SL561P-201ENST00000488553 URB2Q14146 1524 aaKnown RBP10.53□□□□□ -0.72
RN7SL561P-201ENST00000488553 POLA1P09884 1462 aaPredicted RBP10.52□□□□□ -0.73
RN7SL561P-201ENST00000488553 RAD54L2Q9Y4B4 1467 aa10.51□□□□□ -0.73
RN7SL561P-201ENST00000488553 PPARGC1BQ86YN6 1023 aaKnown RBP10.51□□□□□ -0.73
RN7SL561P-201ENST00000488553 ABCA10Q8WWZ4 1543 aa10.51□□□□□ -0.73
RN7SL561P-201ENST00000488553 CARMIL1Q5VZK9 1371 aa10.5□□□□□ -0.73
RN7SL561P-201ENST00000488553 DNAJC5Q9H3Z4 198 aa10.47□□□□□ -0.73
RN7SL561P-201ENST00000488553 VPS8Q8N3P4 1428 aa10.46□□□□□ -0.74
RN7SL561P-201ENST00000488553 RANGAP1P46060 587 aaPredicted RBP10.44□□□□□ -0.74
RN7SL561P-201ENST00000488553 KIF21AQ7Z4S6 1674 aa10.43□□□□□ -0.74
RN7SL561P-201ENST00000488553 MRC2Q9UBG0 1479 aa10.42□□□□□ -0.74
RN7SL561P-201ENST00000488553 TDRD9Q8NDG6 1382 aaKnown RBP10.41□□□□□ -0.74
RN7SL561P-201ENST00000488553 ARAP1Q96P48 1450 aa10.41□□□□□ -0.74
RN7SL561P-201ENST00000488553 GAPVD1Q14C86 1478 aa10.38□□□□□ -0.75
RN7SL561P-201ENST00000488553 ARHGAP35Q9NRY4 1499 aa10.38□□□□□ -0.75
RN7SL561P-201ENST00000488553 WDR97A6NE52 1622 aa10.38□□□□□ -0.75
RN7SL561P-201ENST00000488553 TARBP1Q13395 1621 aaKnown RBP10.38□□□□□ -0.75
RN7SL561P-201ENST00000488553 APLP2Q06481 763 aa10.38□□□□□ -0.75
RN7SL561P-201ENST00000488553 ABCA5Q8WWZ7 1642 aa10.37□□□□□ -0.75
RN7SL561P-201ENST00000488553 CUL7Q14999 1698 aa10.36□□□□□ -0.75
RN7SL561P-201ENST00000488553 TTBK1Q5TCY1 1321 aaPredicted RBP10.34□□□□□ -0.75
RN7SL561P-201ENST00000488553 WDR62O43379 1518 aa10.33□□□□□ -0.76
RN7SL561P-201ENST00000488553 ZEB1P37275 1124 aaPredicted RBP10.33□□□□□ -0.76
RN7SL561P-201ENST00000488553 IFT140Q96RY7 1462 aa10.32□□□□□ -0.76
RN7SL561P-201ENST00000488553 AQRO60306 1485 aaKnown RBP eCLIP10.31□□□□□ -0.76
RN7SL561P-201ENST00000488553 KANK4Q5T7N3 995 aaPredicted RBP10.3□□□□□ -0.76
RN7SL561P-201ENST00000488553 ERCC6Q03468 1493 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms