RNA–Protein interactions for RNA: ENST00000488536.1

UBA7-208, Transcript of ubiquitin like modifier activating enzyme 7, humanhuman

TSL 2

Gene UBA7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA7-208ENST00000488536 NISCHQ9Y2I1 1504 aa30.8■■■□□ 2.52
UBA7-208ENST00000488536 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
UBA7-208ENST00000488536 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
UBA7-208ENST00000488536 DCAF1Q9Y4B6 1507 aa25.64■■□□□ 1.7
UBA7-208ENST00000488536 MYO15BQ96JP2 1530 aa25.22■■□□□ 1.63
UBA7-208ENST00000488536 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
UBA7-208ENST00000488536 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
UBA7-208ENST00000488536 NACADO15069 1562 aa24.83■■□□□ 1.57
UBA7-208ENST00000488536 ABCC9O60706 1549 aa24.67■■□□□ 1.54
UBA7-208ENST00000488536 RB1CC1Q8TDY2 1594 aa24.47■■□□□ 1.51
UBA7-208ENST00000488536 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
UBA7-208ENST00000488536 SCRIBQ14160 1630 aa24.44■■□□□ 1.5
UBA7-208ENST00000488536 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
UBA7-208ENST00000488536 BAZ1AQ9NRL2 1556 aaPredicted RBP23.81■■□□□ 1.4
UBA7-208ENST00000488536 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
UBA7-208ENST00000488536 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
UBA7-208ENST00000488536 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
UBA7-208ENST00000488536 MROH2BQ7Z745 1585 aa23.71■■□□□ 1.39
UBA7-208ENST00000488536 BICRAQ9NZM4 1560 aa23.61■■□□□ 1.37
UBA7-208ENST00000488536 SMARCA4P51532 1647 aa23.56■■□□□ 1.36
UBA7-208ENST00000488536 WIZO95785 1651 aa23.5■■□□□ 1.35
UBA7-208ENST00000488536 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
UBA7-208ENST00000488536 PEG3Q9GZU2 1588 aa23.37■■□□□ 1.33
UBA7-208ENST00000488536 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.32
UBA7-208ENST00000488536 SMARCA2P51531 1590 aa23.17■■□□□ 1.3
UBA7-208ENST00000488536 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.29
UBA7-208ENST00000488536 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
UBA7-208ENST00000488536 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
UBA7-208ENST00000488536 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.29
UBA7-208ENST00000488536 BAZ1BQ9UIG0 1483 aaKnown RBP22.98■■□□□ 1.27
UBA7-208ENST00000488536 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
UBA7-208ENST00000488536 NCAPD3P42695 1498 aa22.88■■□□□ 1.25
UBA7-208ENST00000488536 EEA1Q15075 1411 aa22.7■■□□□ 1.22
UBA7-208ENST00000488536 LOC105371045A0A1W2PR82 267 aa22.69■■□□□ 1.22
UBA7-208ENST00000488536 ABCC8Q09428 1581 aa22.64■■□□□ 1.22
UBA7-208ENST00000488536 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
UBA7-208ENST00000488536 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
UBA7-208ENST00000488536 CFTRP13569 1480 aa22.46■■□□□ 1.19
UBA7-208ENST00000488536 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
UBA7-208ENST00000488536 TOP2BQ02880 1626 aa22.41■■□□□ 1.18
UBA7-208ENST00000488536 CC2D2AQ9P2K1 1620 aa22.41■■□□□ 1.18
UBA7-208ENST00000488536 BIVM-ERCC5R4GMW8 1640 aa22.39■■□□□ 1.17
UBA7-208ENST00000488536 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
UBA7-208ENST00000488536 SOGA1O94964 1423 aa22.35■■□□□ 1.17
UBA7-208ENST00000488536 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
UBA7-208ENST00000488536 TNIKQ9UKE5 1360 aa22.3■■□□□ 1.16
UBA7-208ENST00000488536 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
UBA7-208ENST00000488536 GOLGA3Q08378 1498 aa22.27■■□□□ 1.16
UBA7-208ENST00000488536 KIF21BO75037 1637 aa22.26■■□□□ 1.15
UBA7-208ENST00000488536 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
UBA7-208ENST00000488536 TRIM26Q12899 539 aaPredicted RBP22.24■■□□□ 1.15
UBA7-208ENST00000488536 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
UBA7-208ENST00000488536 CUX1P39880 1505 aa22.16■■□□□ 1.14
UBA7-208ENST00000488536 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
UBA7-208ENST00000488536 CEP162Q5TB80 1403 aa22.12■■□□□ 1.13
UBA7-208ENST00000488536 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
UBA7-208ENST00000488536 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
UBA7-208ENST00000488536 LAMC3Q9Y6N6 1575 aa22.04■■□□□ 1.12
UBA7-208ENST00000488536 UBTFP17480 764 aaKnown RBP22.03■■□□□ 1.12
UBA7-208ENST00000488536 EHMT2Q96KQ7 1210 aa22■■□□□ 1.11
UBA7-208ENST00000488536 PRXQ9BXM0 1461 aa22■■□□□ 1.11
UBA7-208ENST00000488536 FANCD2Q9BXW9 1451 aa22■■□□□ 1.11
UBA7-208ENST00000488536 HRCP23327 699 aa21.99■■□□□ 1.11
UBA7-208ENST00000488536 DNMBPQ6XZF7 1577 aa21.93■■□□□ 1.1
UBA7-208ENST00000488536 RAPGEF2Q9Y4G8 1499 aa21.91■■□□□ 1.1
UBA7-208ENST00000488536 CLIP1P30622 1438 aa21.88■■□□□ 1.09
UBA7-208ENST00000488536 FGD5Q6ZNL6 1462 aa21.87■■□□□ 1.09
UBA7-208ENST00000488536 PDS5BQ9NTI5 1447 aa21.87■■□□□ 1.09
UBA7-208ENST00000488536 CUX2O14529 1486 aa21.82■■□□□ 1.08
UBA7-208ENST00000488536 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
UBA7-208ENST00000488536 VPS8Q8N3P4 1428 aa21.79■■□□□ 1.08
UBA7-208ENST00000488536 ABCA10Q8WWZ4 1543 aa21.78■■□□□ 1.08
UBA7-208ENST00000488536 NESP48681 1621 aa21.76■■□□□ 1.07
UBA7-208ENST00000488536 IGF1RP08069 1367 aa21.75■■□□□ 1.07
UBA7-208ENST00000488536 ZEB1P37275 1124 aaPredicted RBP21.74■■□□□ 1.07
UBA7-208ENST00000488536 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
UBA7-208ENST00000488536 CARMIL1Q5VZK9 1371 aa21.67■■□□□ 1.06
UBA7-208ENST00000488536 URB2Q14146 1524 aaKnown RBP21.65■■□□□ 1.06
UBA7-208ENST00000488536 CUL7Q14999 1698 aa21.64■■□□□ 1.05
UBA7-208ENST00000488536 WDR97A6NE52 1622 aa21.61■■□□□ 1.05
UBA7-208ENST00000488536 APLP2Q06481 763 aa21.6■■□□□ 1.05
UBA7-208ENST00000488536 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
UBA7-208ENST00000488536 RAD54L2Q9Y4B4 1467 aa21.56■■□□□ 1.04
UBA7-208ENST00000488536 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
UBA7-208ENST00000488536 ABCA5Q8WWZ7 1642 aa21.53■■□□□ 1.04
UBA7-208ENST00000488536 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.03
UBA7-208ENST00000488536 ARHGAP35Q9NRY4 1499 aa21.5■■□□□ 1.03
UBA7-208ENST00000488536 PPARGC1BQ86YN6 1023 aaKnown RBP21.48■■□□□ 1.03
UBA7-208ENST00000488536 MAP3K1Q13233 1512 aa21.46■■□□□ 1.03
UBA7-208ENST00000488536 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.03
UBA7-208ENST00000488536 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
UBA7-208ENST00000488536 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
UBA7-208ENST00000488536 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
UBA7-208ENST00000488536 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
UBA7-208ENST00000488536 WDR62O43379 1518 aa21.39■■□□□ 1.01
UBA7-208ENST00000488536 CTTNBP2Q8WZ74 1663 aa21.37■■□□□ 1.01
UBA7-208ENST00000488536 IFT140Q96RY7 1462 aa21.36■■□□□ 1.01
UBA7-208ENST00000488536 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1
UBA7-208ENST00000488536 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 1
UBA7-208ENST00000488536 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms