RNA–Protein interactions for RNA: ENST00000488459.1

HUWE1-212, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-212ENST00000488459 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
HUWE1-212ENST00000488459 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
HUWE1-212ENST00000488459 DCAF8L2P0C7V8 631 aa21.14■□□□□ 0.97
HUWE1-212ENST00000488459 ZCCHC6Q5VYS8 1495 aaKnown RBP21.08■□□□□ 0.97
HUWE1-212ENST00000488459 ABCC9O60706 1549 aa20.83■□□□□ 0.92
HUWE1-212ENST00000488459 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
HUWE1-212ENST00000488459 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
HUWE1-212ENST00000488459 MYO15BQ96JP2 1530 aa20.4■□□□□ 0.86
HUWE1-212ENST00000488459 NACADO15069 1562 aa20.36■□□□□ 0.85
HUWE1-212ENST00000488459 RB1CC1Q8TDY2 1594 aa20.2■□□□□ 0.82
HUWE1-212ENST00000488459 SCRIBQ14160 1630 aa20.2■□□□□ 0.82
HUWE1-212ENST00000488459 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
HUWE1-212ENST00000488459 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
HUWE1-212ENST00000488459 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
HUWE1-212ENST00000488459 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
HUWE1-212ENST00000488459 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
HUWE1-212ENST00000488459 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
HUWE1-212ENST00000488459 MROH2BQ7Z745 1585 aa19.46■□□□□ 0.71
HUWE1-212ENST00000488459 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
HUWE1-212ENST00000488459 SMARCA4P51532 1647 aa19.27■□□□□ 0.68
HUWE1-212ENST00000488459 WIZO95785 1651 aa19.25■□□□□ 0.67
HUWE1-212ENST00000488459 CHIC1Q5VXU3 224 aa19.14■□□□□ 0.65
HUWE1-212ENST00000488459 TOP2AP11388 1531 aaKnown RBP19.06■□□□□ 0.64
HUWE1-212ENST00000488459 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
HUWE1-212ENST00000488459 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
HUWE1-212ENST00000488459 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
HUWE1-212ENST00000488459 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
HUWE1-212ENST00000488459 CCDC88BA6NC98 1476 aa18.95■□□□□ 0.62
HUWE1-212ENST00000488459 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
HUWE1-212ENST00000488459 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
HUWE1-212ENST00000488459 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
HUWE1-212ENST00000488459 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
HUWE1-212ENST00000488459 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.58
HUWE1-212ENST00000488459 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
HUWE1-212ENST00000488459 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
HUWE1-212ENST00000488459 LOC105371045A0A1W2PR82 267 aa18.5■□□□□ 0.55
HUWE1-212ENST00000488459 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.54
HUWE1-212ENST00000488459 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
HUWE1-212ENST00000488459 CFTRP13569 1480 aa18.42■□□□□ 0.54
HUWE1-212ENST00000488459 EHMT2Q96KQ7 1210 aa18.4■□□□□ 0.54
HUWE1-212ENST00000488459 DNAJC5BQ9UF47 199 aa18.4■□□□□ 0.54
HUWE1-212ENST00000488459 SYNJ1O43426 1573 aa18.29■□□□□ 0.52
HUWE1-212ENST00000488459 SOGA1O94964 1423 aa18.27■□□□□ 0.52
HUWE1-212ENST00000488459 NESP48681 1621 aa18.25■□□□□ 0.51
HUWE1-212ENST00000488459 CSRNP3Q8WYN3 585 aa18.22■□□□□ 0.51
HUWE1-212ENST00000488459 FANCD2Q9BXW9 1451 aa18.21■□□□□ 0.51
HUWE1-212ENST00000488459 CUX1P39880 1505 aa18.18■□□□□ 0.5
HUWE1-212ENST00000488459 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
HUWE1-212ENST00000488459 EEA1Q15075 1411 aa18.17■□□□□ 0.5
HUWE1-212ENST00000488459 TOP2BQ02880 1626 aa18.17■□□□□ 0.5
HUWE1-212ENST00000488459 PDS5BQ9NTI5 1447 aa18.12■□□□□ 0.49
HUWE1-212ENST00000488459 LAMC3Q9Y6N6 1575 aa18.12■□□□□ 0.49
HUWE1-212ENST00000488459 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
HUWE1-212ENST00000488459 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
HUWE1-212ENST00000488459 UBTFP17480 764 aaKnown RBP18.08■□□□□ 0.48
HUWE1-212ENST00000488459 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
HUWE1-212ENST00000488459 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
HUWE1-212ENST00000488459 KIF27Q86VH2 1401 aa18■□□□□ 0.47
HUWE1-212ENST00000488459 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
HUWE1-212ENST00000488459 DNMBPQ6XZF7 1577 aa17.97■□□□□ 0.47
HUWE1-212ENST00000488459 CUX2O14529 1486 aa17.96■□□□□ 0.47
HUWE1-212ENST00000488459 GOLGA3Q08378 1498 aa17.95■□□□□ 0.46
HUWE1-212ENST00000488459 URB2Q14146 1524 aaKnown RBP17.95■□□□□ 0.46
HUWE1-212ENST00000488459 TNIKQ9UKE5 1360 aa17.93■□□□□ 0.46
HUWE1-212ENST00000488459 RAD54L2Q9Y4B4 1467 aa17.92■□□□□ 0.46
HUWE1-212ENST00000488459 POLA1P09884 1462 aaPredicted RBP17.89■□□□□ 0.45
HUWE1-212ENST00000488459 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
HUWE1-212ENST00000488459 RANGAP1P46060 587 aaPredicted RBP17.87■□□□□ 0.45
HUWE1-212ENST00000488459 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
HUWE1-212ENST00000488459 RAPGEF2Q9Y4G8 1499 aa17.86■□□□□ 0.45
HUWE1-212ENST00000488459 IGF1RP08069 1367 aa17.85■□□□□ 0.45
HUWE1-212ENST00000488459 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
HUWE1-212ENST00000488459 KIF21BO75037 1637 aa17.84■□□□□ 0.45
HUWE1-212ENST00000488459 CEP162Q5TB80 1403 aa17.83■□□□□ 0.45
HUWE1-212ENST00000488459 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
HUWE1-212ENST00000488459 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
HUWE1-212ENST00000488459 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
HUWE1-212ENST00000488459 CARMIL1Q5VZK9 1371 aa17.79■□□□□ 0.44
HUWE1-212ENST00000488459 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
HUWE1-212ENST00000488459 PPARGC1BQ86YN6 1023 aaKnown RBP17.72■□□□□ 0.43
HUWE1-212ENST00000488459 CLIP1P30622 1438 aa17.72■□□□□ 0.43
HUWE1-212ENST00000488459 PCGF6Q9BYE7 350 aa17.71■□□□□ 0.43
HUWE1-212ENST00000488459 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
HUWE1-212ENST00000488459 WDR62O43379 1518 aa17.67■□□□□ 0.42
HUWE1-212ENST00000488459 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
HUWE1-212ENST00000488459 AQRO60306 1485 aaKnown RBP eCLIP17.64■□□□□ 0.413e-9■■■□□ 15.8
HUWE1-212ENST00000488459 TRIM26Q12899 539 aaPredicted RBP17.63■□□□□ 0.41
HUWE1-212ENST00000488459 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
HUWE1-212ENST00000488459 TTBK1Q5TCY1 1321 aaPredicted RBP17.6■□□□□ 0.41
HUWE1-212ENST00000488459 WDR97A6NE52 1622 aa17.58■□□□□ 0.41
HUWE1-212ENST00000488459 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.4
HUWE1-212ENST00000488459 APLP2Q06481 763 aa17.57■□□□□ 0.4
HUWE1-212ENST00000488459 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
HUWE1-212ENST00000488459 THOC2Q8NI27 1593 aaKnown RBP17.56■□□□□ 0.4
HUWE1-212ENST00000488459 GRIN2BQ13224 1484 aa17.54■□□□□ 0.4
HUWE1-212ENST00000488459 CUL7Q14999 1698 aa17.53■□□□□ 0.4
HUWE1-212ENST00000488459 P3H3Q8IVL6 736 aa17.52■□□□□ 0.4
HUWE1-212ENST00000488459 VPS8Q8N3P4 1428 aa17.51■□□□□ 0.39
HUWE1-212ENST00000488459 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
HUWE1-212ENST00000488459 ARAP1Q96P48 1450 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms