RNA–Protein interactions for RNA: ENST00000488423.1

DPH3-204, Transcript of diphthamide biosynthesis 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DPH3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPH3-204ENST00000488423 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
DPH3-204ENST00000488423 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
DPH3-204ENST00000488423 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
DPH3-204ENST00000488423 SHROOM4Q9ULL8 1493 aa16.09■□□□□ 0.17
DPH3-204ENST00000488423 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
DPH3-204ENST00000488423 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
DPH3-204ENST00000488423 SUPT5HO00267 1087 aaKnown RBP15.66■□□□□ 0.1
DPH3-204ENST00000488423 ABCC9O60706 1549 aa15.47■□□□□ 0.07
DPH3-204ENST00000488423 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
DPH3-204ENST00000488423 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
DPH3-204ENST00000488423 NACADO15069 1562 aa15.32■□□□□ 0.04
DPH3-204ENST00000488423 RB1CC1Q8TDY2 1594 aa15.13■□□□□ 0.01
DPH3-204ENST00000488423 CHIC1Q5VXU3 224 aa15.08■□□□□ 0
DPH3-204ENST00000488423 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ 0
DPH3-204ENST00000488423 CECR2Q9BXF3 1484 aa14.94□□□□□ -0.02
DPH3-204ENST00000488423 MROH2BQ7Z745 1585 aa14.87□□□□□ -0.03
DPH3-204ENST00000488423 UNC13AQ9UPW8 1703 aa14.81□□□□□ -0.04
DPH3-204ENST00000488423 BAZ1AQ9NRL2 1556 aaPredicted RBP14.78□□□□□ -0.04
DPH3-204ENST00000488423 WIZO95785 1651 aa14.77□□□□□ -0.04
DPH3-204ENST00000488423 PABPN1Q86U42 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
DPH3-204ENST00000488423 SMARCA4P51532 1647 aa14.67□□□□□ -0.06
DPH3-204ENST00000488423 BICRAQ9NZM4 1560 aa14.66□□□□□ -0.06
DPH3-204ENST00000488423 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
DPH3-204ENST00000488423 LOC105371045A0A1W2PR82 267 aa14.59□□□□□ -0.07
DPH3-204ENST00000488423 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.07
DPH3-204ENST00000488423 CCDC88BA6NC98 1476 aa14.49□□□□□ -0.09
DPH3-204ENST00000488423 SMARCA2P51531 1590 aa14.47□□□□□ -0.09
DPH3-204ENST00000488423 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
DPH3-204ENST00000488423 EIF4G1Q04637 1599 aaKnown RBP14.45□□□□□ -0.1
DPH3-204ENST00000488423 PEG3Q9GZU2 1588 aa14.42□□□□□ -0.1
DPH3-204ENST00000488423 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
DPH3-204ENST00000488423 BAZ1BQ9UIG0 1483 aaKnown RBP14.33□□□□□ -0.11
DPH3-204ENST00000488423 ABCC8Q09428 1581 aa14.33□□□□□ -0.12
DPH3-204ENST00000488423 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
DPH3-204ENST00000488423 PCGF6Q9BYE7 350 aa14.31□□□□□ -0.12
DPH3-204ENST00000488423 WRNQ14191 1432 aaPredicted RBP eCLIP14.18□□□□□ -0.14
DPH3-204ENST00000488423 NCAPD3P42695 1498 aa14.16□□□□□ -0.14
DPH3-204ENST00000488423 TRIM26Q12899 539 aaPredicted RBP14.15□□□□□ -0.14
DPH3-204ENST00000488423 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
DPH3-204ENST00000488423 SOGA1O94964 1423 aa14.14□□□□□ -0.15
DPH3-204ENST00000488423 HRCP23327 699 aa14.11□□□□□ -0.15
DPH3-204ENST00000488423 EEA1Q15075 1411 aa14.1□□□□□ -0.15
DPH3-204ENST00000488423 SYNJ1O43426 1573 aa14.08□□□□□ -0.16
DPH3-204ENST00000488423 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
DPH3-204ENST00000488423 RUSC2Q8N2Y8 1516 aa14.07□□□□□ -0.16
DPH3-204ENST00000488423 UBTFP17480 764 aaKnown RBP13.99□□□□□ -0.17
DPH3-204ENST00000488423 TNIKQ9UKE5 1360 aa13.98□□□□□ -0.17
DPH3-204ENST00000488423 CEP162Q5TB80 1403 aa13.97□□□□□ -0.17
DPH3-204ENST00000488423 GOLGA3Q08378 1498 aa13.96□□□□□ -0.17
DPH3-204ENST00000488423 TOP2BQ02880 1626 aa13.96□□□□□ -0.17
DPH3-204ENST00000488423 CFTRP13569 1480 aa13.96□□□□□ -0.18
DPH3-204ENST00000488423 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
DPH3-204ENST00000488423 CC2D2AQ9P2K1 1620 aa13.94□□□□□ -0.18
DPH3-204ENST00000488423 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
DPH3-204ENST00000488423 BIVM-ERCC5R4GMW8 1640 aa13.91□□□□□ -0.18
DPH3-204ENST00000488423 KIF21BO75037 1637 aa13.89□□□□□ -0.19
DPH3-204ENST00000488423 CUX1P39880 1505 aa13.88□□□□□ -0.19
DPH3-204ENST00000488423 CADPSQ9ULU8 1353 aa13.86□□□□□ -0.19
DPH3-204ENST00000488423 RAPGEF2Q9Y4G8 1499 aa13.83□□□□□ -0.2
DPH3-204ENST00000488423 PRDM2Q13029 1718 aa13.82□□□□□ -0.2
DPH3-204ENST00000488423 TTBK1Q5TCY1 1321 aaPredicted RBP13.8□□□□□ -0.2
DPH3-204ENST00000488423 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
DPH3-204ENST00000488423 CLIP1P30622 1438 aa13.78□□□□□ -0.2
DPH3-204ENST00000488423 RANGAP1P46060 587 aaPredicted RBP13.75□□□□□ -0.21
DPH3-204ENST00000488423 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
DPH3-204ENST00000488423 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
DPH3-204ENST00000488423 ZEB1P37275 1124 aaPredicted RBP13.73□□□□□ -0.21
DPH3-204ENST00000488423 FANCD2Q9BXW9 1451 aa13.72□□□□□ -0.21
DPH3-204ENST00000488423 CUX2O14529 1486 aa13.69□□□□□ -0.22
DPH3-204ENST00000488423 FGD5Q6ZNL6 1462 aa13.69□□□□□ -0.22
DPH3-204ENST00000488423 VPS8Q8N3P4 1428 aa13.69□□□□□ -0.22
DPH3-204ENST00000488423 NESP48681 1621 aa13.67□□□□□ -0.22
DPH3-204ENST00000488423 APLP2Q06481 763 aa13.66□□□□□ -0.22
DPH3-204ENST00000488423 IGF1RP08069 1367 aa13.62□□□□□ -0.23
DPH3-204ENST00000488423 DNMBPQ6XZF7 1577 aa13.61□□□□□ -0.23
DPH3-204ENST00000488423 LAMC3Q9Y6N6 1575 aa13.61□□□□□ -0.23
DPH3-204ENST00000488423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.6□□□□□ -0.23
DPH3-204ENST00000488423 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
DPH3-204ENST00000488423 CCER1Q8TC90 406 aaPredicted RBP13.59□□□□□ -0.23
DPH3-204ENST00000488423 DNAJC5BQ9UF47 199 aa13.59□□□□□ -0.23
DPH3-204ENST00000488423 CARMIL1Q5VZK9 1371 aa13.58□□□□□ -0.24
DPH3-204ENST00000488423 ARAP1Q96P48 1450 aa13.57□□□□□ -0.24
DPH3-204ENST00000488423 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
DPH3-204ENST00000488423 RAD54L2Q9Y4B4 1467 aa13.56□□□□□ -0.24
DPH3-204ENST00000488423 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
DPH3-204ENST00000488423 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
DPH3-204ENST00000488423 URB2Q14146 1524 aaKnown RBP13.52□□□□□ -0.25
DPH3-204ENST00000488423 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
DPH3-204ENST00000488423 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
DPH3-204ENST00000488423 KIF21AQ7Z4S6 1674 aa13.45□□□□□ -0.26
DPH3-204ENST00000488423 KANK4Q5T7N3 995 aaPredicted RBP13.44□□□□□ -0.26
DPH3-204ENST00000488423 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
DPH3-204ENST00000488423 CUL7Q14999 1698 aa13.42□□□□□ -0.26
DPH3-204ENST00000488423 WDR97A6NE52 1622 aa13.41□□□□□ -0.26
DPH3-204ENST00000488423 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
DPH3-204ENST00000488423 P3H3Q8IVL6 736 aa13.39□□□□□ -0.27
DPH3-204ENST00000488423 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
DPH3-204ENST00000488423 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
DPH3-204ENST00000488423 MRC2Q9UBG0 1479 aa13.33□□□□□ -0.27
DPH3-204ENST00000488423 FHOD3Q2V2M9 1422 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms