RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 NISCHQ9Y2I1 1504 aa37.3■■■■□ 3.56
TM2D1-208ENST00000488206 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
TM2D1-208ENST00000488206 ABCC9O60706 1549 aa31.79■■■□□ 2.68
TM2D1-208ENST00000488206 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
TM2D1-208ENST00000488206 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
TM2D1-208ENST00000488206 NACADO15069 1562 aa30.92■■■□□ 2.54
TM2D1-208ENST00000488206 MYO15BQ96JP2 1530 aa30.9■■■□□ 2.54
TM2D1-208ENST00000488206 RB1CC1Q8TDY2 1594 aa30.84■■■□□ 2.53
TM2D1-208ENST00000488206 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
TM2D1-208ENST00000488206 SCRIBQ14160 1630 aa30.14■■■□□ 2.41
TM2D1-208ENST00000488206 UNC13AQ9UPW8 1703 aa30.12■■■□□ 2.41
TM2D1-208ENST00000488206 BICRAQ9NZM4 1560 aa29.85■■■□□ 2.37
TM2D1-208ENST00000488206 PABPN1Q86U42 306 aaKnown RBP eCLIP29.7■■■□□ 2.35
TM2D1-208ENST00000488206 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
TM2D1-208ENST00000488206 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
TM2D1-208ENST00000488206 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.22
TM2D1-208ENST00000488206 BAZ1AQ9NRL2 1556 aaPredicted RBP28.92■■■□□ 2.22
TM2D1-208ENST00000488206 SMARCA4P51532 1647 aa28.88■■■□□ 2.21
TM2D1-208ENST00000488206 CC2D2AQ9P2K1 1620 aa28.8■■■□□ 2.2
TM2D1-208ENST00000488206 MROH2BQ7Z745 1585 aa28.73■■■□□ 2.19
TM2D1-208ENST00000488206 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
TM2D1-208ENST00000488206 SMARCA2P51531 1590 aa28.61■■■□□ 2.17
TM2D1-208ENST00000488206 PEG3Q9GZU2 1588 aa28.6■■■□□ 2.17
TM2D1-208ENST00000488206 ATAD2BQ9ULI0 1458 aa28.57■■■□□ 2.16
TM2D1-208ENST00000488206 RSF1Q96T23 1441 aaPredicted RBP28.56■■■□□ 2.16
TM2D1-208ENST00000488206 NCAPD3P42695 1498 aa28.48■■■□□ 2.15
TM2D1-208ENST00000488206 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
TM2D1-208ENST00000488206 WIZO95785 1651 aa28.45■■■□□ 2.14
TM2D1-208ENST00000488206 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.13
TM2D1-208ENST00000488206 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
TM2D1-208ENST00000488206 SUPT5HO00267 1087 aaKnown RBP28.1■■■□□ 2.09
TM2D1-208ENST00000488206 CCDC88BA6NC98 1476 aa27.83■■■□□ 2.04
TM2D1-208ENST00000488206 LAMC3Q9Y6N6 1575 aa27.7■■■□□ 2.03
TM2D1-208ENST00000488206 CADPSQ9ULU8 1353 aa27.65■■■□□ 2.02
TM2D1-208ENST00000488206 NESP48681 1621 aa27.62■■■□□ 2.01
TM2D1-208ENST00000488206 CFTRP13569 1480 aa27.62■■■□□ 2.01
TM2D1-208ENST00000488206 PRDM2Q13029 1718 aa27.53■■■□□ 2
TM2D1-208ENST00000488206 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
TM2D1-208ENST00000488206 ERCC6Q03468 1493 aa27.41■■□□□ 1.98
TM2D1-208ENST00000488206 KIF21AQ7Z4S6 1674 aa27.37■■□□□ 1.97
TM2D1-208ENST00000488206 FANCD2Q9BXW9 1451 aa27.37■■□□□ 1.97
TM2D1-208ENST00000488206 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
TM2D1-208ENST00000488206 THOC2Q8NI27 1593 aaKnown RBP27.2■■□□□ 1.94
TM2D1-208ENST00000488206 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
TM2D1-208ENST00000488206 WDR62O43379 1518 aa27.1■■□□□ 1.93
TM2D1-208ENST00000488206 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
TM2D1-208ENST00000488206 AEBP2Q6ZN18 517 aaPredicted RBP27.05■■□□□ 1.92
TM2D1-208ENST00000488206 ABCC8Q09428 1581 aa27.03■■□□□ 1.92
TM2D1-208ENST00000488206 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
TM2D1-208ENST00000488206 TOPBP1Q92547 1522 aa26.99■■□□□ 1.91
TM2D1-208ENST00000488206 CUX2O14529 1486 aa26.98■■□□□ 1.91
TM2D1-208ENST00000488206 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
TM2D1-208ENST00000488206 CUX1P39880 1505 aa26.95■■□□□ 1.9
TM2D1-208ENST00000488206 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
TM2D1-208ENST00000488206 SYNJ1O43426 1573 aa26.87■■□□□ 1.89
TM2D1-208ENST00000488206 TOP2BQ02880 1626 aa26.87■■□□□ 1.89
TM2D1-208ENST00000488206 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
TM2D1-208ENST00000488206 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
TM2D1-208ENST00000488206 IFT140Q96RY7 1462 aa26.73■■□□□ 1.87
TM2D1-208ENST00000488206 TARBP1Q13395 1621 aaKnown RBP26.67■■□□□ 1.86
TM2D1-208ENST00000488206 SOGA1O94964 1423 aa26.65■■□□□ 1.86
TM2D1-208ENST00000488206 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
TM2D1-208ENST00000488206 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
TM2D1-208ENST00000488206 ABCA10Q8WWZ4 1543 aa26.57■■□□□ 1.84
TM2D1-208ENST00000488206 TRIM41Q8WV44 630 aa26.55■■□□□ 1.84
TM2D1-208ENST00000488206 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
TM2D1-208ENST00000488206 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
TM2D1-208ENST00000488206 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
TM2D1-208ENST00000488206 ABCA5Q8WWZ7 1642 aa26.45■■□□□ 1.82
TM2D1-208ENST00000488206 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
TM2D1-208ENST00000488206 AQRO60306 1485 aaKnown RBP eCLIP26.4■■□□□ 1.82
TM2D1-208ENST00000488206 GAPVD1Q14C86 1478 aa26.38■■□□□ 1.81
TM2D1-208ENST00000488206 KIF27Q86VH2 1401 aa26.35■■□□□ 1.81
TM2D1-208ENST00000488206 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
TM2D1-208ENST00000488206 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
TM2D1-208ENST00000488206 ERICH3Q5RHP9 1530 aa26.28■■□□□ 1.8
TM2D1-208ENST00000488206 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
TM2D1-208ENST00000488206 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
TM2D1-208ENST00000488206 EEA1Q15075 1411 aa26.19■■□□□ 1.78
TM2D1-208ENST00000488206 ADAMTS12P58397 1594 aa26.18■■□□□ 1.78
TM2D1-208ENST00000488206 RUSC2Q8N2Y8 1516 aa26.17■■□□□ 1.78
TM2D1-208ENST00000488206 CUL7Q14999 1698 aa26.16■■□□□ 1.78
TM2D1-208ENST00000488206 IGF1RP08069 1367 aa26.12■■□□□ 1.77
TM2D1-208ENST00000488206 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
TM2D1-208ENST00000488206 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
TM2D1-208ENST00000488206 CHD1O14646 1710 aa26.06■■□□□ 1.76
TM2D1-208ENST00000488206 CARMIL1Q5VZK9 1371 aa26■■□□□ 1.75
TM2D1-208ENST00000488206 GRIN2AQ12879 1464 aa25.99■■□□□ 1.75
TM2D1-208ENST00000488206 CHMP7Q8WUX9 453 aaPredicted RBP25.99■■□□□ 1.75
TM2D1-208ENST00000488206 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
TM2D1-208ENST00000488206 FBLN2P98095 1184 aa25.96■■□□□ 1.75
TM2D1-208ENST00000488206 FAM9AQ8IZU1 332 aaPredicted RBP25.95■■□□□ 1.74
TM2D1-208ENST00000488206 PRXQ9BXM0 1461 aa25.95■■□□□ 1.74
TM2D1-208ENST00000488206 RAPGEF2Q9Y4G8 1499 aa25.93■■□□□ 1.74
TM2D1-208ENST00000488206 KIF21BO75037 1637 aa25.89■■□□□ 1.74
TM2D1-208ENST00000488206 NUP160Q12769 1436 aa25.86■■□□□ 1.73
TM2D1-208ENST00000488206 CEP170Q5SW79 1584 aa25.85■■□□□ 1.73
TM2D1-208ENST00000488206 OSCARQ8IYS5 282 aa25.82■■□□□ 1.72
TM2D1-208ENST00000488206 CLASP1Q7Z460 1538 aa25.8■■□□□ 1.72
TM2D1-208ENST00000488206 GOLGA3Q08378 1498 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms