RNA–Protein interactions for RNA: ENST00000488121.1

COL1A2-209, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 380 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-209ENST00000488121 NISCHQ9Y2I1 1504 aa26.74■■□□□ 1.87
COL1A2-209ENST00000488121 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
COL1A2-209ENST00000488121 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
COL1A2-209ENST00000488121 ABCC9O60706 1549 aa22.68■■□□□ 1.22
COL1A2-209ENST00000488121 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
COL1A2-209ENST00000488121 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
COL1A2-209ENST00000488121 DCAF1Q9Y4B6 1507 aa22.1■■□□□ 1.13
COL1A2-209ENST00000488121 NACADO15069 1562 aa22.05■■□□□ 1.12
COL1A2-209ENST00000488121 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
COL1A2-209ENST00000488121 MYO15BQ96JP2 1530 aa22.02■■□□□ 1.12
COL1A2-209ENST00000488121 RB1CC1Q8TDY2 1594 aa21.97■■□□□ 1.11
COL1A2-209ENST00000488121 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
COL1A2-209ENST00000488121 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
COL1A2-209ENST00000488121 UNC13AQ9UPW8 1703 aa21.43■■□□□ 1.02
COL1A2-209ENST00000488121 PABPN1Q86U42 306 aaKnown RBP eCLIP21.34■■□□□ 1.01
COL1A2-209ENST00000488121 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
COL1A2-209ENST00000488121 CECR2Q9BXF3 1484 aa20.8■□□□□ 0.92
COL1A2-209ENST00000488121 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
COL1A2-209ENST00000488121 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
COL1A2-209ENST00000488121 SMARCA4P51532 1647 aa20.62■□□□□ 0.89
COL1A2-209ENST00000488121 MROH2BQ7Z745 1585 aa20.61■□□□□ 0.89
COL1A2-209ENST00000488121 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
COL1A2-209ENST00000488121 SUPT5HO00267 1087 aaKnown RBP20.52■□□□□ 0.88
COL1A2-209ENST00000488121 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
COL1A2-209ENST00000488121 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
COL1A2-209ENST00000488121 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
COL1A2-209ENST00000488121 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
COL1A2-209ENST00000488121 WIZO95785 1651 aa20.42■□□□□ 0.86
COL1A2-209ENST00000488121 PEG3Q9GZU2 1588 aa20.39■□□□□ 0.85
COL1A2-209ENST00000488121 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
COL1A2-209ENST00000488121 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
COL1A2-209ENST00000488121 HMGXB3Q12766 1538 aa20.24■□□□□ 0.83
COL1A2-209ENST00000488121 TOP2AP11388 1531 aaKnown RBP20.19■□□□□ 0.82
COL1A2-209ENST00000488121 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
COL1A2-209ENST00000488121 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
COL1A2-209ENST00000488121 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
COL1A2-209ENST00000488121 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
COL1A2-209ENST00000488121 CFTRP13569 1480 aa19.75■□□□□ 0.75
COL1A2-209ENST00000488121 NESP48681 1621 aa19.73■□□□□ 0.75
COL1A2-209ENST00000488121 LAMC3Q9Y6N6 1575 aa19.73■□□□□ 0.75
COL1A2-209ENST00000488121 PDS5BQ9NTI5 1447 aa19.64■□□□□ 0.73
COL1A2-209ENST00000488121 PRDM2Q13029 1718 aa19.57■□□□□ 0.72
COL1A2-209ENST00000488121 FANCD2Q9BXW9 1451 aa19.57■□□□□ 0.72
COL1A2-209ENST00000488121 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
COL1A2-209ENST00000488121 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
COL1A2-209ENST00000488121 KIF21AQ7Z4S6 1674 aa19.47■□□□□ 0.71
COL1A2-209ENST00000488121 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
COL1A2-209ENST00000488121 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
COL1A2-209ENST00000488121 MRC2Q9UBG0 1479 aa19.36■□□□□ 0.69
COL1A2-209ENST00000488121 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
COL1A2-209ENST00000488121 URB2Q14146 1524 aaKnown RBP19.32■□□□□ 0.68
COL1A2-209ENST00000488121 CUX1P39880 1505 aa19.3■□□□□ 0.68
COL1A2-209ENST00000488121 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
COL1A2-209ENST00000488121 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
COL1A2-209ENST00000488121 SYNJ1O43426 1573 aa19.26■□□□□ 0.67
COL1A2-209ENST00000488121 THOC2Q8NI27 1593 aaKnown RBP19.26■□□□□ 0.67
COL1A2-209ENST00000488121 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
COL1A2-209ENST00000488121 WDR62O43379 1518 aa19.25■□□□□ 0.67
COL1A2-209ENST00000488121 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
COL1A2-209ENST00000488121 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
COL1A2-209ENST00000488121 SOGA1O94964 1423 aa19.16■□□□□ 0.66
COL1A2-209ENST00000488121 POLA1P09884 1462 aaPredicted RBP19.15■□□□□ 0.66
COL1A2-209ENST00000488121 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
COL1A2-209ENST00000488121 CUX2O14529 1486 aa19.09■□□□□ 0.65
COL1A2-209ENST00000488121 IFT140Q96RY7 1462 aa19.07■□□□□ 0.64
COL1A2-209ENST00000488121 TARBP1Q13395 1621 aaKnown RBP19.02■□□□□ 0.64
COL1A2-209ENST00000488121 ABCA10Q8WWZ4 1543 aa19.01■□□□□ 0.63
COL1A2-209ENST00000488121 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
COL1A2-209ENST00000488121 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
COL1A2-209ENST00000488121 KIF27Q86VH2 1401 aa18.96■□□□□ 0.63
COL1A2-209ENST00000488121 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
COL1A2-209ENST00000488121 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL1A2-209ENST00000488121 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
COL1A2-209ENST00000488121 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
COL1A2-209ENST00000488121 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
COL1A2-209ENST00000488121 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.61
COL1A2-209ENST00000488121 EEA1Q15075 1411 aa18.88■□□□□ 0.61
COL1A2-209ENST00000488121 IGF1RP08069 1367 aa18.85■□□□□ 0.61
COL1A2-209ENST00000488121 ABCA5Q8WWZ7 1642 aa18.85■□□□□ 0.61
COL1A2-209ENST00000488121 EIF4G3O43432 1585 aaKnown RBP18.84■□□□□ 0.61
COL1A2-209ENST00000488121 FOXD1Q16676 465 aa18.83■□□□□ 0.6
COL1A2-209ENST00000488121 GRIN2BQ13224 1484 aa18.83■□□□□ 0.6
COL1A2-209ENST00000488121 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
COL1A2-209ENST00000488121 PBRM1Q86U86 1689 aa18.76■□□□□ 0.59
COL1A2-209ENST00000488121 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
COL1A2-209ENST00000488121 SNAPC4Q5SXM2 1469 aa18.72■□□□□ 0.59
COL1A2-209ENST00000488121 FBLN2P98095 1184 aa18.72■□□□□ 0.59
COL1A2-209ENST00000488121 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
COL1A2-209ENST00000488121 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
COL1A2-209ENST00000488121 FHAD1B1AJZ9 1412 aa18.7■□□□□ 0.58
COL1A2-209ENST00000488121 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
COL1A2-209ENST00000488121 CUL7Q14999 1698 aa18.69■□□□□ 0.58
COL1A2-209ENST00000488121 PRXQ9BXM0 1461 aa18.67■□□□□ 0.58
COL1A2-209ENST00000488121 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
COL1A2-209ENST00000488121 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
COL1A2-209ENST00000488121 LOC105371045A0A1W2PR82 267 aa18.64■□□□□ 0.57
COL1A2-209ENST00000488121 ADAMTS12P58397 1594 aa18.63■□□□□ 0.57
COL1A2-209ENST00000488121 UBTFP17480 764 aaKnown RBP18.62■□□□□ 0.57
COL1A2-209ENST00000488121 KIF21BO75037 1637 aa18.6■□□□□ 0.57
COL1A2-209ENST00000488121 GOLGA3Q08378 1498 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms