RNA–Protein interactions for RNA: ENST00000487913.5

NR1H3-224, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-224ENST00000487913 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
NR1H3-224ENST00000487913 ABCC9O60706 1549 aa32.21■■■□□ 2.75
NR1H3-224ENST00000487913 CCDC180Q9P1Z9 1646 aa31.39■■■□□ 2.62
NR1H3-224ENST00000487913 DNAJC5BQ9UF47 199 aa30.92■■■□□ 2.54
NR1H3-224ENST00000487913 RB1CC1Q8TDY2 1594 aa30.26■■■□□ 2.43
NR1H3-224ENST00000487913 PABPN1Q86U42 306 aaKnown RBP eCLIP29.91■■■□□ 2.38
NR1H3-224ENST00000487913 NACADO15069 1562 aa29.88■■■□□ 2.37
NR1H3-224ENST00000487913 DCAF8L2P0C7V8 631 aa29.66■■■□□ 2.34
NR1H3-224ENST00000487913 UNC13AQ9UPW8 1703 aa29.55■■■□□ 2.32
NR1H3-224ENST00000487913 BICRAQ9NZM4 1560 aa29.47■■■□□ 2.31
NR1H3-224ENST00000487913 MYO15BQ96JP2 1530 aa29.22■■■□□ 2.27
NR1H3-224ENST00000487913 CECR2Q9BXF3 1484 aa29.08■■■□□ 2.25
NR1H3-224ENST00000487913 CC2D2AQ9P2K1 1620 aa29.02■■■□□ 2.24
NR1H3-224ENST00000487913 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
NR1H3-224ENST00000487913 DNAJC5Q9H3Z4 198 aa28.86■■■□□ 2.21
NR1H3-224ENST00000487913 EIF4G1Q04637 1599 aaKnown RBP28.78■■■□□ 2.2
NR1H3-224ENST00000487913 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
NR1H3-224ENST00000487913 ZCCHC6Q5VYS8 1495 aaKnown RBP28.62■■■□□ 2.17
NR1H3-224ENST00000487913 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
NR1H3-224ENST00000487913 CUX2O14529 1486 aa28■■■□□ 2.07
NR1H3-224ENST00000487913 ERCC6Q03468 1493 aa27.83■■■□□ 2.04
NR1H3-224ENST00000487913 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
NR1H3-224ENST00000487913 NESP48681 1621 aa27.48■■□□□ 1.99
NR1H3-224ENST00000487913 ATAD2BQ9ULI0 1458 aa27.46■■□□□ 1.99
NR1H3-224ENST00000487913 HMGXB3Q12766 1538 aa27.33■■□□□ 1.97
NR1H3-224ENST00000487913 TRIM41Q8WV44 630 aa27.32■■□□□ 1.96
NR1H3-224ENST00000487913 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
NR1H3-224ENST00000487913 THOC2Q8NI27 1593 aaKnown RBP27.3■■□□□ 1.96
NR1H3-224ENST00000487913 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
NR1H3-224ENST00000487913 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
NR1H3-224ENST00000487913 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.93
NR1H3-224ENST00000487913 KIF21AQ7Z4S6 1674 aa27.02■■□□□ 1.92
NR1H3-224ENST00000487913 PDS5BQ9NTI5 1447 aa26.98■■□□□ 1.91
NR1H3-224ENST00000487913 BAZ1AQ9NRL2 1556 aaPredicted RBP26.97■■□□□ 1.91
NR1H3-224ENST00000487913 PEG3Q9GZU2 1588 aa26.95■■□□□ 1.9
NR1H3-224ENST00000487913 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
NR1H3-224ENST00000487913 MROH2BQ7Z745 1585 aa26.77■■□□□ 1.88
NR1H3-224ENST00000487913 WDR62O43379 1518 aa26.76■■□□□ 1.87
NR1H3-224ENST00000487913 CADPSQ9ULU8 1353 aa26.76■■□□□ 1.87
NR1H3-224ENST00000487913 OSCARQ8IYS5 282 aa26.62■■□□□ 1.85
NR1H3-224ENST00000487913 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
NR1H3-224ENST00000487913 FANCD2Q9BXW9 1451 aa26.47■■□□□ 1.83
NR1H3-224ENST00000487913 WIZO95785 1651 aa26.38■■□□□ 1.81
NR1H3-224ENST00000487913 RIMBP3CA6NJZ7 1639 aa26.36■■□□□ 1.81
NR1H3-224ENST00000487913 RIMBP3BA6NNM3 1639 aa26.36■■□□□ 1.81
NR1H3-224ENST00000487913 RIMBP3Q9UFD9 1639 aa26.36■■□□□ 1.81
NR1H3-224ENST00000487913 URB2Q14146 1524 aaKnown RBP26.32■■□□□ 1.8
NR1H3-224ENST00000487913 CFTRP13569 1480 aa26.3■■□□□ 1.8
NR1H3-224ENST00000487913 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
NR1H3-224ENST00000487913 ZNF608Q9ULD9 1512 aaPredicted RBP26.13■■□□□ 1.77
NR1H3-224ENST00000487913 CYB5RLQ6IPT4 315 aa26.09■■□□□ 1.77
NR1H3-224ENST00000487913 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
NR1H3-224ENST00000487913 TRHP20396 242 aaPredicted RBP26.02■■□□□ 1.76
NR1H3-224ENST00000487913 TOP2AP11388 1531 aaKnown RBP25.99■■□□□ 1.75
NR1H3-224ENST00000487913 RSF1Q96T23 1441 aaPredicted RBP25.96■■□□□ 1.75
NR1H3-224ENST00000487913 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
NR1H3-224ENST00000487913 EIF4G3O43432 1585 aaKnown RBP25.9■■□□□ 1.74
NR1H3-224ENST00000487913 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
NR1H3-224ENST00000487913 PRDM2Q13029 1718 aa25.86■■□□□ 1.73
NR1H3-224ENST00000487913 CHD1O14646 1710 aa25.8■■□□□ 1.72
NR1H3-224ENST00000487913 AQRO60306 1485 aaKnown RBP eCLIP25.79■■□□□ 1.729e-8■■■■□ 21.2
NR1H3-224ENST00000487913 FBLN2P98095 1184 aa25.76■■□□□ 1.71
NR1H3-224ENST00000487913 AEBP2Q6ZN18 517 aaPredicted RBP25.76■■□□□ 1.71
NR1H3-224ENST00000487913 CCDC88BA6NC98 1476 aa25.74■■□□□ 1.71
NR1H3-224ENST00000487913 ABCC8Q09428 1581 aa25.71■■□□□ 1.71
NR1H3-224ENST00000487913 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.7
NR1H3-224ENST00000487913 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
NR1H3-224ENST00000487913 POLA1P09884 1462 aaPredicted RBP25.58■■□□□ 1.69
NR1H3-224ENST00000487913 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
NR1H3-224ENST00000487913 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
NR1H3-224ENST00000487913 TDRD9Q8NDG6 1382 aaKnown RBP25.52■■□□□ 1.68
NR1H3-224ENST00000487913 SNAPC4Q5SXM2 1469 aa25.49■■□□□ 1.67
NR1H3-224ENST00000487913 SOGA1O94964 1423 aa25.45■■□□□ 1.66
NR1H3-224ENST00000487913 CHMP7Q8WUX9 453 aaPredicted RBP25.42■■□□□ 1.66
NR1H3-224ENST00000487913 SYNJ1O43426 1573 aa25.42■■□□□ 1.66
NR1H3-224ENST00000487913 MAGI1Q96QZ7 1491 aaPredicted RBP25.35■■□□□ 1.65
NR1H3-224ENST00000487913 GAPVD1Q14C86 1478 aa25.33■■□□□ 1.65
NR1H3-224ENST00000487913 FGD5Q6ZNL6 1462 aa25.32■■□□□ 1.64
NR1H3-224ENST00000487913 WDR97A6NE52 1622 aa25.31■■□□□ 1.64
NR1H3-224ENST00000487913 SYNJ2O15056 1496 aa25.29■■□□□ 1.64
NR1H3-224ENST00000487913 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
NR1H3-224ENST00000487913 CUX1P39880 1505 aa25.19■■□□□ 1.62
NR1H3-224ENST00000487913 ERCC6L2Q5T890 1561 aa25.14■■□□□ 1.61
NR1H3-224ENST00000487913 PBRM1Q86U86 1689 aa25.1■■□□□ 1.61
NR1H3-224ENST00000487913 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
NR1H3-224ENST00000487913 CEP170Q5SW79 1584 aa24.98■■□□□ 1.59
NR1H3-224ENST00000487913 GRIN2AQ12879 1464 aa24.98■■□□□ 1.59
NR1H3-224ENST00000487913 ABCA10Q8WWZ4 1543 aa24.97■■□□□ 1.59
NR1H3-224ENST00000487913 NUP160Q12769 1436 aa24.93■■□□□ 1.58
NR1H3-224ENST00000487913 KIF13AQ9H1H9 1805 aa24.91■■□□□ 1.58
NR1H3-224ENST00000487913 ADAMTS12P58397 1594 aa24.87■■□□□ 1.57
NR1H3-224ENST00000487913 SHROOM2Q13796 1616 aa24.86■■□□□ 1.57
NR1H3-224ENST00000487913 KDM4FA0A1W2PPD8 638 aa24.77■■□□□ 1.56
NR1H3-224ENST00000487913 FAM69CQ0P6D2 419 aa24.77■■□□□ 1.56
NR1H3-224ENST00000487913 ILDR1Q86SU0 546 aaPredicted RBP24.77■■□□□ 1.56
NR1H3-224ENST00000487913 FHAD1B1AJZ9 1412 aa24.77■■□□□ 1.56
NR1H3-224ENST00000487913 PRG4Q92954 1404 aaPredicted RBP24.76■■□□□ 1.55
NR1H3-224ENST00000487913 ABCC10Q5T3U5 1492 aa24.74■■□□□ 1.55
NR1H3-224ENST00000487913 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
NR1H3-224ENST00000487913 JPH4Q96JJ6 628 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms