RNA–Protein interactions for RNA: ENST00000487881.2

TSC22D1-207, Transcript of TSC22 domain family member 1, humanhuman

TSL 2

Gene TSC22D1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-207ENST00000487881 NISCHQ9Y2I1 1504 aa29.51■■■□□ 2.32
TSC22D1-207ENST00000487881 AEBP2Q6ZN18 517 aaPredicted RBP27.96■■■□□ 2.07
TSC22D1-207ENST00000487881 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
TSC22D1-207ENST00000487881 CCDC180Q9P1Z9 1646 aa26.09■■□□□ 1.77
TSC22D1-207ENST00000487881 ABCC9O60706 1549 aa25.29■■□□□ 1.64
TSC22D1-207ENST00000487881 DCAF8L2P0C7V8 631 aa24.8■■□□□ 1.56
TSC22D1-207ENST00000487881 ZCCHC6Q5VYS8 1495 aaKnown RBP24.61■■□□□ 1.53
TSC22D1-207ENST00000487881 NACADO15069 1562 aa24.53■■□□□ 1.52
TSC22D1-207ENST00000487881 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
TSC22D1-207ENST00000487881 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.5
TSC22D1-207ENST00000487881 DCAF1Q9Y4B6 1507 aa24.45■■□□□ 1.5
TSC22D1-207ENST00000487881 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
TSC22D1-207ENST00000487881 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
TSC22D1-207ENST00000487881 UNC13AQ9UPW8 1703 aa23.75■■□□□ 1.39
TSC22D1-207ENST00000487881 PABPN1Q86U42 306 aaKnown RBP eCLIP23.74■■□□□ 1.39
TSC22D1-207ENST00000487881 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.37
TSC22D1-207ENST00000487881 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
TSC22D1-207ENST00000487881 SHROOM4Q9ULL8 1493 aa23.56■■□□□ 1.36
TSC22D1-207ENST00000487881 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
TSC22D1-207ENST00000487881 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
TSC22D1-207ENST00000487881 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
TSC22D1-207ENST00000487881 DNAJC5BQ9UF47 199 aa22.88■■□□□ 1.25
TSC22D1-207ENST00000487881 CC2D2AQ9P2K1 1620 aa22.85■■□□□ 1.25
TSC22D1-207ENST00000487881 SMARCA4P51532 1647 aa22.81■■□□□ 1.24
TSC22D1-207ENST00000487881 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
TSC22D1-207ENST00000487881 SMARCA2P51531 1590 aa22.7■■□□□ 1.22
TSC22D1-207ENST00000487881 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
TSC22D1-207ENST00000487881 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
TSC22D1-207ENST00000487881 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
TSC22D1-207ENST00000487881 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
TSC22D1-207ENST00000487881 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
TSC22D1-207ENST00000487881 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
TSC22D1-207ENST00000487881 WIZO95785 1651 aa22.47■■□□□ 1.19
TSC22D1-207ENST00000487881 SUPT5HO00267 1087 aaKnown RBP22.42■■□□□ 1.18
TSC22D1-207ENST00000487881 TOP2AP11388 1531 aaKnown RBP22.3■■□□□ 1.16
TSC22D1-207ENST00000487881 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
TSC22D1-207ENST00000487881 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
TSC22D1-207ENST00000487881 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
TSC22D1-207ENST00000487881 FOXD1Q16676 465 aa22.01■■□□□ 1.11
TSC22D1-207ENST00000487881 LAMC3Q9Y6N6 1575 aa21.98■■□□□ 1.11
TSC22D1-207ENST00000487881 PDS5BQ9NTI5 1447 aa21.92■■□□□ 1.1
TSC22D1-207ENST00000487881 NESP48681 1621 aa21.91■■□□□ 1.1
TSC22D1-207ENST00000487881 CFTRP13569 1480 aa21.9■■□□□ 1.1
TSC22D1-207ENST00000487881 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
TSC22D1-207ENST00000487881 FANCD2Q9BXW9 1451 aa21.74■■□□□ 1.07
TSC22D1-207ENST00000487881 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
TSC22D1-207ENST00000487881 PRDM2Q13029 1718 aa21.68■■□□□ 1.06
TSC22D1-207ENST00000487881 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
TSC22D1-207ENST00000487881 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.05
TSC22D1-207ENST00000487881 ABCC8Q09428 1581 aa21.53■■□□□ 1.04
TSC22D1-207ENST00000487881 CUX2O14529 1486 aa21.49■■□□□ 1.03
TSC22D1-207ENST00000487881 THOC2Q8NI27 1593 aaKnown RBP21.47■■□□□ 1.03
TSC22D1-207ENST00000487881 WDR62O43379 1518 aa21.44■■□□□ 1.02
TSC22D1-207ENST00000487881 URB2Q14146 1524 aaKnown RBP21.42■■□□□ 1.02
TSC22D1-207ENST00000487881 DNMBPQ6XZF7 1577 aa21.39■■□□□ 1.01
TSC22D1-207ENST00000487881 TOPBP1Q92547 1522 aa21.39■■□□□ 1.01
TSC22D1-207ENST00000487881 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
TSC22D1-207ENST00000487881 CUX1P39880 1505 aa21.29■■□□□ 1
TSC22D1-207ENST00000487881 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
TSC22D1-207ENST00000487881 SOGA1O94964 1423 aa21.23■□□□□ 0.99
TSC22D1-207ENST00000487881 FGD5Q6ZNL6 1462 aa21.22■□□□□ 0.99
TSC22D1-207ENST00000487881 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
TSC22D1-207ENST00000487881 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
TSC22D1-207ENST00000487881 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
TSC22D1-207ENST00000487881 ADRA2BP18089 450 aa21.2■□□□□ 0.98
TSC22D1-207ENST00000487881 PPP6R1Q9UPN7 881 aa21.2■□□□□ 0.98
TSC22D1-207ENST00000487881 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
TSC22D1-207ENST00000487881 SYNJ1O43426 1573 aa21.17■□□□□ 0.98
TSC22D1-207ENST00000487881 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
TSC22D1-207ENST00000487881 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
TSC22D1-207ENST00000487881 TDRD9Q8NDG6 1382 aaKnown RBP21.05■□□□□ 0.96
TSC22D1-207ENST00000487881 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
TSC22D1-207ENST00000487881 ZNF608Q9ULD9 1512 aaPredicted RBP21.02■□□□□ 0.96
TSC22D1-207ENST00000487881 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
TSC22D1-207ENST00000487881 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.953e-6■■■□□ 15.7
TSC22D1-207ENST00000487881 GAPVD1Q14C86 1478 aa20.97■□□□□ 0.95
TSC22D1-207ENST00000487881 KIF27Q86VH2 1401 aa20.95■□□□□ 0.95
TSC22D1-207ENST00000487881 EIF4G3O43432 1585 aaKnown RBP20.94■□□□□ 0.94
TSC22D1-207ENST00000487881 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
TSC22D1-207ENST00000487881 FBLN2P98095 1184 aa20.87■□□□□ 0.93
TSC22D1-207ENST00000487881 ABCA5Q8WWZ7 1642 aa20.86■□□□□ 0.93
TSC22D1-207ENST00000487881 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
TSC22D1-207ENST00000487881 MAGI1Q96QZ7 1491 aaPredicted RBP20.83■□□□□ 0.93
TSC22D1-207ENST00000487881 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
TSC22D1-207ENST00000487881 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
TSC22D1-207ENST00000487881 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
TSC22D1-207ENST00000487881 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
TSC22D1-207ENST00000487881 EEA1Q15075 1411 aa20.78■□□□□ 0.92
TSC22D1-207ENST00000487881 IGF1RP08069 1367 aa20.77■□□□□ 0.92
TSC22D1-207ENST00000487881 PIAS4Q8N2W9 510 aaPredicted RBP20.77■□□□□ 0.92
TSC22D1-207ENST00000487881 FHAD1B1AJZ9 1412 aa20.75■□□□□ 0.91
TSC22D1-207ENST00000487881 SYNJ2O15056 1496 aa20.74■□□□□ 0.91
TSC22D1-207ENST00000487881 CSRNP3Q8WYN3 585 aa20.72■□□□□ 0.91
TSC22D1-207ENST00000487881 FAM9AQ8IZU1 332 aaPredicted RBP20.71■□□□□ 0.91
TSC22D1-207ENST00000487881 CARMIL1Q5VZK9 1371 aa20.71■□□□□ 0.91
TSC22D1-207ENST00000487881 CUL7Q14999 1698 aa20.68■□□□□ 0.9
TSC22D1-207ENST00000487881 RUSC2Q8N2Y8 1516 aa20.68■□□□□ 0.9
TSC22D1-207ENST00000487881 ADAMTS12P58397 1594 aa20.65■□□□□ 0.9
TSC22D1-207ENST00000487881 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
TSC22D1-207ENST00000487881 CHD1O14646 1710 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms