RNA–Protein interactions for RNA: ENST00000487680.1

SLC44A4-209, Transcript of solute carrier family 44 member 4, humanhuman

TSL 3

Gene SLC44A4, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4-209ENST00000487680 NISCHQ9Y2I1 1504 aa21.61■■□□□ 1.05
SLC44A4-209ENST00000487680 ABCC9O60706 1549 aa19.91■□□□□ 0.78
SLC44A4-209ENST00000487680 CCDC180Q9P1Z9 1646 aa19.5■□□□□ 0.71
SLC44A4-209ENST00000487680 DNAJC5BQ9UF47 199 aa19.13■□□□□ 0.65
SLC44A4-209ENST00000487680 RB1CC1Q8TDY2 1594 aa18.76■□□□□ 0.59
SLC44A4-209ENST00000487680 NACADO15069 1562 aa18.55■□□□□ 0.56
SLC44A4-209ENST00000487680 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
SLC44A4-209ENST00000487680 DCAF8L2P0C7V8 631 aa18.41■□□□□ 0.54
SLC44A4-209ENST00000487680 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
SLC44A4-209ENST00000487680 BICRAQ9NZM4 1560 aa18.29■□□□□ 0.52
SLC44A4-209ENST00000487680 MYO15BQ96JP2 1530 aa18.2■□□□□ 0.5
SLC44A4-209ENST00000487680 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
SLC44A4-209ENST00000487680 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.47
SLC44A4-209ENST00000487680 SHROOM4Q9ULL8 1493 aa17.94■□□□□ 0.46
SLC44A4-209ENST00000487680 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.45
SLC44A4-209ENST00000487680 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
SLC44A4-209ENST00000487680 DNAJC5Q9H3Z4 198 aa17.81■□□□□ 0.44
SLC44A4-209ENST00000487680 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
SLC44A4-209ENST00000487680 SCRIBQ14160 1630 aa17.74■□□□□ 0.43
SLC44A4-209ENST00000487680 CUX2O14529 1486 aa17.3■□□□□ 0.36
SLC44A4-209ENST00000487680 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
SLC44A4-209ENST00000487680 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
SLC44A4-209ENST00000487680 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
SLC44A4-209ENST00000487680 NESP48681 1621 aa17.02■□□□□ 0.31
SLC44A4-209ENST00000487680 HMGXB3Q12766 1538 aa16.96■□□□□ 0.3
SLC44A4-209ENST00000487680 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
SLC44A4-209ENST00000487680 SMARCA4P51532 1647 aa16.91■□□□□ 0.3
SLC44A4-209ENST00000487680 THOC2Q8NI27 1593 aaKnown RBP16.88■□□□□ 0.29
SLC44A4-209ENST00000487680 BAZ1BQ9UIG0 1483 aaKnown RBP16.82■□□□□ 0.28
SLC44A4-209ENST00000487680 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
SLC44A4-209ENST00000487680 LAMC3Q9Y6N6 1575 aa16.8■□□□□ 0.28
SLC44A4-209ENST00000487680 PEG3Q9GZU2 1588 aa16.77■□□□□ 0.28
SLC44A4-209ENST00000487680 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.27
SLC44A4-209ENST00000487680 KIF21AQ7Z4S6 1674 aa16.73■□□□□ 0.27
SLC44A4-209ENST00000487680 PDS5BQ9NTI5 1447 aa16.72■□□□□ 0.27
SLC44A4-209ENST00000487680 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
SLC44A4-209ENST00000487680 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.25
SLC44A4-209ENST00000487680 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
SLC44A4-209ENST00000487680 WDR62O43379 1518 aa16.57■□□□□ 0.24
SLC44A4-209ENST00000487680 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
SLC44A4-209ENST00000487680 CEP164Q9UPV0 1460 aa16.43■□□□□ 0.22
SLC44A4-209ENST00000487680 WIZO95785 1651 aa16.42■□□□□ 0.22
SLC44A4-209ENST00000487680 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
SLC44A4-209ENST00000487680 CFTRP13569 1480 aa16.35■□□□□ 0.21
SLC44A4-209ENST00000487680 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
SLC44A4-209ENST00000487680 RIMBP3CA6NJZ7 1639 aa16.27■□□□□ 0.2
SLC44A4-209ENST00000487680 RIMBP3BA6NNM3 1639 aa16.27■□□□□ 0.2
SLC44A4-209ENST00000487680 RIMBP3Q9UFD9 1639 aa16.27■□□□□ 0.2
SLC44A4-209ENST00000487680 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
SLC44A4-209ENST00000487680 ARHGEF11O15085 1522 aa16.19■□□□□ 0.18
SLC44A4-209ENST00000487680 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
SLC44A4-209ENST00000487680 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
SLC44A4-209ENST00000487680 IFT140Q96RY7 1462 aa16.15■□□□□ 0.18
SLC44A4-209ENST00000487680 CYB5RLQ6IPT4 315 aa16.14■□□□□ 0.17
SLC44A4-209ENST00000487680 PRDM2Q13029 1718 aa16.08■□□□□ 0.17
SLC44A4-209ENST00000487680 TOPBP1Q92547 1522 aa16.07■□□□□ 0.16
SLC44A4-209ENST00000487680 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
SLC44A4-209ENST00000487680 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
SLC44A4-209ENST00000487680 EIF4G3O43432 1585 aaKnown RBP16.01■□□□□ 0.15
SLC44A4-209ENST00000487680 ARAP1Q96P48 1450 aa16.01■□□□□ 0.15
SLC44A4-209ENST00000487680 ABCC8Q09428 1581 aa16■□□□□ 0.15
SLC44A4-209ENST00000487680 AQRO60306 1485 aaKnown RBP eCLIP16■□□□□ 0.152e-6■■■■■ 29.2
SLC44A4-209ENST00000487680 CHD1O14646 1710 aa15.97■□□□□ 0.15
SLC44A4-209ENST00000487680 TARBP1Q13395 1621 aaKnown RBP15.96■□□□□ 0.15
SLC44A4-209ENST00000487680 DNMBPQ6XZF7 1577 aa15.95■□□□□ 0.14
SLC44A4-209ENST00000487680 FBLN2P98095 1184 aa15.94■□□□□ 0.14
SLC44A4-209ENST00000487680 POLA1P09884 1462 aaPredicted RBP15.88■□□□□ 0.13
SLC44A4-209ENST00000487680 RAD54L2Q9Y4B4 1467 aa15.85■□□□□ 0.13
SLC44A4-209ENST00000487680 TDRD9Q8NDG6 1382 aaKnown RBP15.85■□□□□ 0.13
SLC44A4-209ENST00000487680 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
SLC44A4-209ENST00000487680 SOGA1O94964 1423 aa15.82■□□□□ 0.12
SLC44A4-209ENST00000487680 CLASP1Q7Z460 1538 aa15.82■□□□□ 0.12
SLC44A4-209ENST00000487680 CHMP7Q8WUX9 453 aaPredicted RBP15.78■□□□□ 0.12
SLC44A4-209ENST00000487680 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
SLC44A4-209ENST00000487680 SYNJ1O43426 1573 aa15.73■□□□□ 0.11
SLC44A4-209ENST00000487680 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
SLC44A4-209ENST00000487680 MAGI1Q96QZ7 1491 aaPredicted RBP15.72■□□□□ 0.11
SLC44A4-209ENST00000487680 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.11
SLC44A4-209ENST00000487680 GRIN2BQ13224 1484 aa15.7■□□□□ 0.1
SLC44A4-209ENST00000487680 SYNJ2O15056 1496 aa15.69■□□□□ 0.1
SLC44A4-209ENST00000487680 GAPVD1Q14C86 1478 aa15.67■□□□□ 0.1
SLC44A4-209ENST00000487680 CUX1P39880 1505 aa15.66■□□□□ 0.1
SLC44A4-209ENST00000487680 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
SLC44A4-209ENST00000487680 ERCC6L2Q5T890 1561 aa15.56■□□□□ 0.08
SLC44A4-209ENST00000487680 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
SLC44A4-209ENST00000487680 ABCA5Q8WWZ7 1642 aa15.51■□□□□ 0.07
SLC44A4-209ENST00000487680 GRIN2AQ12879 1464 aa15.49■□□□□ 0.07
SLC44A4-209ENST00000487680 NUP160Q12769 1436 aa15.48■□□□□ 0.07
SLC44A4-209ENST00000487680 CEP170Q5SW79 1584 aa15.48■□□□□ 0.07
SLC44A4-209ENST00000487680 KIF13AQ9H1H9 1805 aa15.44■□□□□ 0.06
SLC44A4-209ENST00000487680 SHROOM2Q13796 1616 aa15.43■□□□□ 0.06
SLC44A4-209ENST00000487680 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
SLC44A4-209ENST00000487680 FHAD1B1AJZ9 1412 aa15.39■□□□□ 0.05
SLC44A4-209ENST00000487680 WRNQ14191 1432 aaPredicted RBP eCLIP15.38■□□□□ 0.05
SLC44A4-209ENST00000487680 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
SLC44A4-209ENST00000487680 PRG4Q92954 1404 aaPredicted RBP15.35■□□□□ 0.05
SLC44A4-209ENST00000487680 FAM69CQ0P6D2 419 aa15.34■□□□□ 0.05
SLC44A4-209ENST00000487680 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.04
SLC44A4-209ENST00000487680 KDM4FA0A1W2PPD8 638 aa15.32■□□□□ 0.04
SLC44A4-209ENST00000487680 ERICH3Q5RHP9 1530 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms