RNA–Protein interactions for RNA: ENST00000487666.5

CDHR4-206, Transcript of cadherin related family member 4, humanhuman

TSL 2

Gene CDHR4, Length 554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-206ENST00000487666 NISCHQ9Y2I1 1504 aa18.09■□□□□ 0.49
CDHR4-206ENST00000487666 ABCC9O60706 1549 aa16.91■□□□□ 0.3
CDHR4-206ENST00000487666 CCDC180Q9P1Z9 1646 aa16.37■□□□□ 0.21
CDHR4-206ENST00000487666 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
CDHR4-206ENST00000487666 RB1CC1Q8TDY2 1594 aa15.82■□□□□ 0.12
CDHR4-206ENST00000487666 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
CDHR4-206ENST00000487666 NACADO15069 1562 aa15.61■□□□□ 0.09
CDHR4-206ENST00000487666 DCAF8L2P0C7V8 631 aa15.47■□□□□ 0.07
CDHR4-206ENST00000487666 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.06
CDHR4-206ENST00000487666 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
CDHR4-206ENST00000487666 DNAJC5Q9H3Z4 198 aa15.26■□□□□ 0.03
CDHR4-206ENST00000487666 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
CDHR4-206ENST00000487666 MYO15BQ96JP2 1530 aa15.24■□□□□ 0.03
CDHR4-206ENST00000487666 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.03
CDHR4-206ENST00000487666 SHROOM4Q9ULL8 1493 aa15.11■□□□□ 0.01
CDHR4-206ENST00000487666 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
CDHR4-206ENST00000487666 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
CDHR4-206ENST00000487666 ZCCHC6Q5VYS8 1495 aaKnown RBP14.91□□□□□ -0.02
CDHR4-206ENST00000487666 DCAF1Q9Y4B6 1507 aa14.89□□□□□ -0.03
CDHR4-206ENST00000487666 CUX2O14529 1486 aa14.7□□□□□ -0.06
CDHR4-206ENST00000487666 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
CDHR4-206ENST00000487666 NCAPD3P42695 1498 aa14.45□□□□□ -0.1
CDHR4-206ENST00000487666 NESP48681 1621 aa14.41□□□□□ -0.1
CDHR4-206ENST00000487666 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
CDHR4-206ENST00000487666 ATAD2BQ9ULI0 1458 aa14.36□□□□□ -0.11
CDHR4-206ENST00000487666 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
CDHR4-206ENST00000487666 HMGXB3Q12766 1538 aa14.27□□□□□ -0.12
CDHR4-206ENST00000487666 SMARCA2P51531 1590 aa14.23□□□□□ -0.13
CDHR4-206ENST00000487666 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
CDHR4-206ENST00000487666 BAZ1BQ9UIG0 1483 aaKnown RBP14.16□□□□□ -0.14
CDHR4-206ENST00000487666 LAMC3Q9Y6N6 1575 aa14.15□□□□□ -0.14
CDHR4-206ENST00000487666 KIF21AQ7Z4S6 1674 aa14.14□□□□□ -0.15
CDHR4-206ENST00000487666 PDS5BQ9NTI5 1447 aa14.1□□□□□ -0.15
CDHR4-206ENST00000487666 PEG3Q9GZU2 1588 aa14.06□□□□□ -0.16
CDHR4-206ENST00000487666 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
CDHR4-206ENST00000487666 MRC2Q9UBG0 1479 aa14.03□□□□□ -0.16
CDHR4-206ENST00000487666 WDR62O43379 1518 aa14□□□□□ -0.17
CDHR4-206ENST00000487666 CADPSQ9ULU8 1353 aa13.99□□□□□ -0.17
CDHR4-206ENST00000487666 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
CDHR4-206ENST00000487666 OSCARQ8IYS5 282 aa13.96□□□□□ -0.17
CDHR4-206ENST00000487666 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
CDHR4-206ENST00000487666 RIMBP3CA6NJZ7 1639 aa13.84□□□□□ -0.19
CDHR4-206ENST00000487666 RIMBP3BA6NNM3 1639 aa13.84□□□□□ -0.19
CDHR4-206ENST00000487666 RIMBP3Q9UFD9 1639 aa13.84□□□□□ -0.19
CDHR4-206ENST00000487666 FANCD2Q9BXW9 1451 aa13.83□□□□□ -0.2
CDHR4-206ENST00000487666 URB2Q14146 1524 aaKnown RBP13.78□□□□□ -0.2
CDHR4-206ENST00000487666 ARHGEF11O15085 1522 aa13.77□□□□□ -0.21
CDHR4-206ENST00000487666 WIZO95785 1651 aa13.75□□□□□ -0.21
CDHR4-206ENST00000487666 CFTRP13569 1480 aa13.74□□□□□ -0.21
CDHR4-206ENST00000487666 CYB5RLQ6IPT4 315 aa13.7□□□□□ -0.22
CDHR4-206ENST00000487666 ZNF608Q9ULD9 1512 aaPredicted RBP13.69□□□□□ -0.22
CDHR4-206ENST00000487666 TRHP20396 242 aaPredicted RBP13.67□□□□□ -0.22
CDHR4-206ENST00000487666 ARAP1Q96P48 1450 aa13.63□□□□□ -0.23
CDHR4-206ENST00000487666 AEBP2Q6ZN18 517 aaPredicted RBP13.62□□□□□ -0.23
CDHR4-206ENST00000487666 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
CDHR4-206ENST00000487666 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
CDHR4-206ENST00000487666 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
CDHR4-206ENST00000487666 TOPBP1Q92547 1522 aa13.53□□□□□ -0.24
CDHR4-206ENST00000487666 RSF1Q96T23 1441 aaPredicted RBP13.51□□□□□ -0.25
CDHR4-206ENST00000487666 CHD1O14646 1710 aa13.5□□□□□ -0.25
CDHR4-206ENST00000487666 AQRO60306 1485 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDHR4-206ENST00000487666 FBLN2P98095 1184 aa13.46□□□□□ -0.25
CDHR4-206ENST00000487666 PRDM2Q13029 1718 aa13.46□□□□□ -0.25
CDHR4-206ENST00000487666 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
CDHR4-206ENST00000487666 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
CDHR4-206ENST00000487666 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
CDHR4-206ENST00000487666 ABCC8Q09428 1581 aa13.4□□□□□ -0.26
CDHR4-206ENST00000487666 CLASP1Q7Z460 1538 aa13.38□□□□□ -0.27
CDHR4-206ENST00000487666 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
CDHR4-206ENST00000487666 TDRD9Q8NDG6 1382 aaKnown RBP13.35□□□□□ -0.27
CDHR4-206ENST00000487666 RAD54L2Q9Y4B4 1467 aa13.35□□□□□ -0.27
CDHR4-206ENST00000487666 SNAPC4Q5SXM2 1469 aa13.33□□□□□ -0.28
CDHR4-206ENST00000487666 CHMP7Q8WUX9 453 aaPredicted RBP13.28□□□□□ -0.28
CDHR4-206ENST00000487666 SOGA1O94964 1423 aa13.28□□□□□ -0.28
CDHR4-206ENST00000487666 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
CDHR4-206ENST00000487666 GAPVD1Q14C86 1478 aa13.27□□□□□ -0.29
CDHR4-206ENST00000487666 MAGI1Q96QZ7 1491 aaPredicted RBP13.23□□□□□ -0.29
CDHR4-206ENST00000487666 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
CDHR4-206ENST00000487666 GRIN2BQ13224 1484 aa13.21□□□□□ -0.3
CDHR4-206ENST00000487666 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
CDHR4-206ENST00000487666 WDR97A6NE52 1622 aa13.2□□□□□ -0.3
CDHR4-206ENST00000487666 ERCC6L2Q5T890 1561 aa13.18□□□□□ -0.3
CDHR4-206ENST00000487666 CUX1P39880 1505 aa13.14□□□□□ -0.31
CDHR4-206ENST00000487666 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
CDHR4-206ENST00000487666 PBRM1Q86U86 1689 aa13.08□□□□□ -0.31
CDHR4-206ENST00000487666 CEP170Q5SW79 1584 aa13.07□□□□□ -0.32
CDHR4-206ENST00000487666 KIF13AQ9H1H9 1805 aa13.06□□□□□ -0.32
CDHR4-206ENST00000487666 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
CDHR4-206ENST00000487666 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
CDHR4-206ENST00000487666 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
CDHR4-206ENST00000487666 NUP160Q12769 1436 aa13.04□□□□□ -0.32
CDHR4-206ENST00000487666 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
CDHR4-206ENST00000487666 SHROOM2Q13796 1616 aa13□□□□□ -0.33
CDHR4-206ENST00000487666 FAM69CQ0P6D2 419 aa12.98□□□□□ -0.33
CDHR4-206ENST00000487666 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
CDHR4-206ENST00000487666 ABCC10Q5T3U5 1492 aa12.97□□□□□ -0.33
CDHR4-206ENST00000487666 PRG4Q92954 1404 aaPredicted RBP12.94□□□□□ -0.34
CDHR4-206ENST00000487666 FHAD1B1AJZ9 1412 aa12.92□□□□□ -0.34
CDHR4-206ENST00000487666 DIP2BQ9P265 1576 aa12.92□□□□□ -0.34
CDHR4-206ENST00000487666 MAPKBP1O60336 1514 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms