RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
CDK11A-217ENST00000487462 CHIC1Q5VXU3 224 aa26.57■■□□□ 1.84
CDK11A-217ENST00000487462 NISCHQ9Y2I1 1504 aa25■■□□□ 1.59
CDK11A-217ENST00000487462 ABCC9O60706 1549 aa23.59■■□□□ 1.37
CDK11A-217ENST00000487462 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
CDK11A-217ENST00000487462 SENP3Q9H4L4 574 aaPredicted RBP23.2■■□□□ 1.3
CDK11A-217ENST00000487462 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
CDK11A-217ENST00000487462 CCDC180Q9P1Z9 1646 aa22.84■■□□□ 1.25
CDK11A-217ENST00000487462 RB1CC1Q8TDY2 1594 aa22.09■■□□□ 1.13
CDK11A-217ENST00000487462 PABPN1Q86U42 306 aaKnown RBP eCLIP21.79■■□□□ 1.08
CDK11A-217ENST00000487462 NACADO15069 1562 aa21.74■■□□□ 1.07
CDK11A-217ENST00000487462 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
CDK11A-217ENST00000487462 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
CDK11A-217ENST00000487462 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
CDK11A-217ENST00000487462 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
CDK11A-217ENST00000487462 FOXD1Q16676 465 aa21.39■■□□□ 1.01
CDK11A-217ENST00000487462 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
CDK11A-217ENST00000487462 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
CDK11A-217ENST00000487462 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
CDK11A-217ENST00000487462 MYO15BQ96JP2 1530 aa21.18■□□□□ 0.98
CDK11A-217ENST00000487462 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
CDK11A-217ENST00000487462 EIF4G1Q04637 1599 aaKnown RBP21.06■□□□□ 0.96
CDK11A-217ENST00000487462 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
CDK11A-217ENST00000487462 CUX2O14529 1486 aa20.69■□□□□ 0.9
CDK11A-217ENST00000487462 DCAF1Q9Y4B6 1507 aa20.6■□□□□ 0.89
CDK11A-217ENST00000487462 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
CDK11A-217ENST00000487462 ADRA2BP18089 450 aa20.53■□□□□ 0.88
CDK11A-217ENST00000487462 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
CDK11A-217ENST00000487462 ERCC6Q03468 1493 aa20.4■□□□□ 0.86
CDK11A-217ENST00000487462 PIAS4Q8N2W9 510 aaPredicted RBP20.28■□□□□ 0.84
CDK11A-217ENST00000487462 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
CDK11A-217ENST00000487462 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.8
CDK11A-217ENST00000487462 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
CDK11A-217ENST00000487462 NESP48681 1621 aa20.07■□□□□ 0.8
CDK11A-217ENST00000487462 MSH5O43196 834 aa19.91■□□□□ 0.78
CDK11A-217ENST00000487462 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
CDK11A-217ENST00000487462 HMGXB3Q12766 1538 aa19.89■□□□□ 0.77
CDK11A-217ENST00000487462 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
CDK11A-217ENST00000487462 KIF21AQ7Z4S6 1674 aa19.82■□□□□ 0.76
CDK11A-217ENST00000487462 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
CDK11A-217ENST00000487462 SMARCA4P51532 1647 aa19.71■□□□□ 0.75
CDK11A-217ENST00000487462 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
CDK11A-217ENST00000487462 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
CDK11A-217ENST00000487462 PDS5BQ9NTI5 1447 aa19.62■□□□□ 0.73
CDK11A-217ENST00000487462 WDR62O43379 1518 aa19.58■□□□□ 0.73
CDK11A-217ENST00000487462 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
CDK11A-217ENST00000487462 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
CDK11A-217ENST00000487462 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
CDK11A-217ENST00000487462 RIMBP3CA6NJZ7 1639 aa19.48■□□□□ 0.71
CDK11A-217ENST00000487462 RIMBP3BA6NNM3 1639 aa19.48■□□□□ 0.71
CDK11A-217ENST00000487462 RIMBP3Q9UFD9 1639 aa19.48■□□□□ 0.71
CDK11A-217ENST00000487462 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
CDK11A-217ENST00000487462 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
CDK11A-217ENST00000487462 CEP164Q9UPV0 1460 aa19.29■□□□□ 0.68
CDK11A-217ENST00000487462 MROH2BQ7Z745 1585 aa19.27■□□□□ 0.67
CDK11A-217ENST00000487462 FANCD2Q9BXW9 1451 aa19.21■□□□□ 0.67
CDK11A-217ENST00000487462 TRHP20396 242 aaPredicted RBP19.15■□□□□ 0.66
CDK11A-217ENST00000487462 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
CDK11A-217ENST00000487462 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
CDK11A-217ENST00000487462 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
CDK11A-217ENST00000487462 ZNF608Q9ULD9 1512 aaPredicted RBP19.04■□□□□ 0.64
CDK11A-217ENST00000487462 CFTRP13569 1480 aa19.03■□□□□ 0.64
CDK11A-217ENST00000487462 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.64
CDK11A-217ENST00000487462 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
CDK11A-217ENST00000487462 WIZO95785 1651 aa19.01■□□□□ 0.63
CDK11A-217ENST00000487462 CHD1O14646 1710 aa18.95■□□□□ 0.62
CDK11A-217ENST00000487462 IFT140Q96RY7 1462 aa18.93■□□□□ 0.62
CDK11A-217ENST00000487462 EIF4G3O43432 1585 aaKnown RBP18.91■□□□□ 0.62
CDK11A-217ENST00000487462 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
CDK11A-217ENST00000487462 PRDM2Q13029 1718 aa18.86■□□□□ 0.61
CDK11A-217ENST00000487462 TOPBP1Q92547 1522 aa18.76■□□□□ 0.59
CDK11A-217ENST00000487462 AQRO60306 1485 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDK11A-217ENST00000487462 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.58
CDK11A-217ENST00000487462 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
CDK11A-217ENST00000487462 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
CDK11A-217ENST00000487462 FBLN2P98095 1184 aa18.67■□□□□ 0.58
CDK11A-217ENST00000487462 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
CDK11A-217ENST00000487462 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
CDK11A-217ENST00000487462 ABCC8Q09428 1581 aa18.6■□□□□ 0.57
CDK11A-217ENST00000487462 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
CDK11A-217ENST00000487462 ILDR1Q86SU0 546 aaPredicted RBP18.58■□□□□ 0.56
CDK11A-217ENST00000487462 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
CDK11A-217ENST00000487462 CNKSR2Q8WXI2 1034 aa18.54■□□□□ 0.56
CDK11A-217ENST00000487462 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
CDK11A-217ENST00000487462 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.55
CDK11A-217ENST00000487462 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
CDK11A-217ENST00000487462 KCNA4P22459 653 aa18.49■□□□□ 0.55
CDK11A-217ENST00000487462 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
CDK11A-217ENST00000487462 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.54
CDK11A-217ENST00000487462 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
CDK11A-217ENST00000487462 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
CDK11A-217ENST00000487462 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
CDK11A-217ENST00000487462 KIF13AQ9H1H9 1805 aa18.42■□□□□ 0.54
CDK11A-217ENST00000487462 WDR97A6NE52 1622 aa18.41■□□□□ 0.54
CDK11A-217ENST00000487462 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
CDK11A-217ENST00000487462 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
CDK11A-217ENST00000487462 SOGA1O94964 1423 aa18.36■□□□□ 0.53
CDK11A-217ENST00000487462 ERCC6L2Q5T890 1561 aa18.35■□□□□ 0.53
CDK11A-217ENST00000487462 GRIN2BQ13224 1484 aa18.32■□□□□ 0.52
CDK11A-217ENST00000487462 KDM4FA0A1W2PPD8 638 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms