RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 NISCHQ9Y2I1 1504 aa33.41■■■□□ 2.94
GCA-210ENST00000487445 CCDC180Q9P1Z9 1646 aa29.16■■■□□ 2.26
GCA-210ENST00000487445 ABCC9O60706 1549 aa28.11■■■□□ 2.09
GCA-210ENST00000487445 ZCCHC6Q5VYS8 1495 aaKnown RBP27.98■■■□□ 2.07
GCA-210ENST00000487445 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
GCA-210ENST00000487445 DCAF1Q9Y4B6 1507 aa27.56■■■□□ 2
GCA-210ENST00000487445 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
GCA-210ENST00000487445 NACADO15069 1562 aa27.33■■□□□ 1.97
GCA-210ENST00000487445 RB1CC1Q8TDY2 1594 aa27.19■■□□□ 1.94
GCA-210ENST00000487445 SHROOM4Q9ULL8 1493 aa27.18■■□□□ 1.94
GCA-210ENST00000487445 SCRIBQ14160 1630 aa26.9■■□□□ 1.9
GCA-210ENST00000487445 PABPN1Q86U42 306 aaKnown RBP eCLIP26.52■■□□□ 1.84
GCA-210ENST00000487445 UNC13AQ9UPW8 1703 aa26.46■■□□□ 1.83
GCA-210ENST00000487445 BICRAQ9NZM4 1560 aa26.34■■□□□ 1.81
GCA-210ENST00000487445 CECR2Q9BXF3 1484 aa26.05■■□□□ 1.76
GCA-210ENST00000487445 SUPT5HO00267 1087 aaKnown RBP26.02■■□□□ 1.76
GCA-210ENST00000487445 RSF1Q96T23 1441 aaPredicted RBP25.84■■□□□ 1.73
GCA-210ENST00000487445 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
GCA-210ENST00000487445 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
GCA-210ENST00000487445 SMARCA4P51532 1647 aa25.71■■□□□ 1.71
GCA-210ENST00000487445 EIF4G1Q04637 1599 aaKnown RBP25.63■■□□□ 1.69
GCA-210ENST00000487445 WIZO95785 1651 aa25.54■■□□□ 1.68
GCA-210ENST00000487445 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.67
GCA-210ENST00000487445 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
GCA-210ENST00000487445 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
GCA-210ENST00000487445 CC2D2AQ9P2K1 1620 aa25.33■■□□□ 1.65
GCA-210ENST00000487445 BAZ1BQ9UIG0 1483 aaKnown RBP25.3■■□□□ 1.64
GCA-210ENST00000487445 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
GCA-210ENST00000487445 TOP2AP11388 1531 aaKnown RBP25.27■■□□□ 1.64
GCA-210ENST00000487445 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
GCA-210ENST00000487445 DNAJC5BQ9UF47 199 aa25.15■■□□□ 1.62
GCA-210ENST00000487445 CCDC88BA6NC98 1476 aa25.07■■□□□ 1.6
GCA-210ENST00000487445 CADPSQ9ULU8 1353 aa24.66■■□□□ 1.54
GCA-210ENST00000487445 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
GCA-210ENST00000487445 CFTRP13569 1480 aa24.63■■□□□ 1.53
GCA-210ENST00000487445 NESP48681 1621 aa24.54■■□□□ 1.52
GCA-210ENST00000487445 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
GCA-210ENST00000487445 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
GCA-210ENST00000487445 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
GCA-210ENST00000487445 FANCD2Q9BXW9 1451 aa24.37■■□□□ 1.49
GCA-210ENST00000487445 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
GCA-210ENST00000487445 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
GCA-210ENST00000487445 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
GCA-210ENST00000487445 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
GCA-210ENST00000487445 SYNJ1O43426 1573 aa24.18■■□□□ 1.46
GCA-210ENST00000487445 CUX1P39880 1505 aa24.15■■□□□ 1.46
GCA-210ENST00000487445 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
GCA-210ENST00000487445 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
GCA-210ENST00000487445 TOP2BQ02880 1626 aa24.09■■□□□ 1.45
GCA-210ENST00000487445 FAM9AQ8IZU1 332 aaPredicted RBP24.06■■□□□ 1.44
GCA-210ENST00000487445 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
GCA-210ENST00000487445 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
GCA-210ENST00000487445 BIVM-ERCC5R4GMW8 1640 aa24.01■■□□□ 1.43
GCA-210ENST00000487445 DNMBPQ6XZF7 1577 aa24.01■■□□□ 1.43
GCA-210ENST00000487445 MRC2Q9UBG0 1479 aa24.01■■□□□ 1.43
GCA-210ENST00000487445 FGD5Q6ZNL6 1462 aa23.97■■□□□ 1.43
GCA-210ENST00000487445 SOGA1O94964 1423 aa23.95■■□□□ 1.42
GCA-210ENST00000487445 POLA1P09884 1462 aaPredicted RBP23.9■■□□□ 1.42
GCA-210ENST00000487445 RUSC2Q8N2Y8 1516 aa23.86■■□□□ 1.41
GCA-210ENST00000487445 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
GCA-210ENST00000487445 WDR62O43379 1518 aa23.85■■□□□ 1.41
GCA-210ENST00000487445 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
GCA-210ENST00000487445 CUX2O14529 1486 aa23.79■■□□□ 1.4
GCA-210ENST00000487445 CSRNP3Q8WYN3 585 aa23.78■■□□□ 1.4
GCA-210ENST00000487445 EHMT2Q96KQ7 1210 aa23.78■■□□□ 1.4
GCA-210ENST00000487445 EEA1Q15075 1411 aa23.77■■□□□ 1.4
GCA-210ENST00000487445 KIF27Q86VH2 1401 aa23.77■■□□□ 1.4
GCA-210ENST00000487445 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
GCA-210ENST00000487445 ABCA10Q8WWZ4 1543 aa23.72■■□□□ 1.39
GCA-210ENST00000487445 TDRD9Q8NDG6 1382 aaKnown RBP23.72■■□□□ 1.39
GCA-210ENST00000487445 IFT140Q96RY7 1462 aa23.67■■□□□ 1.38
GCA-210ENST00000487445 TARBP1Q13395 1621 aaKnown RBP23.63■■□□□ 1.37
GCA-210ENST00000487445 IGF1RP08069 1367 aa23.61■■□□□ 1.37
GCA-210ENST00000487445 AQRO60306 1485 aaKnown RBP eCLIP23.59■■□□□ 1.37
GCA-210ENST00000487445 ZNF608Q9ULD9 1512 aaPredicted RBP23.58■■□□□ 1.37
GCA-210ENST00000487445 GAPVD1Q14C86 1478 aa23.57■■□□□ 1.36
GCA-210ENST00000487445 WDR97A6NE52 1622 aa23.54■■□□□ 1.36
GCA-210ENST00000487445 UBTFP17480 764 aaKnown RBP23.5■■□□□ 1.35
GCA-210ENST00000487445 ABCA5Q8WWZ7 1642 aa23.49■■□□□ 1.35
GCA-210ENST00000487445 CARMIL1Q5VZK9 1371 aa23.49■■□□□ 1.35
GCA-210ENST00000487445 PRXQ9BXM0 1461 aa23.47■■□□□ 1.35
GCA-210ENST00000487445 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
GCA-210ENST00000487445 RAPGEF2Q9Y4G8 1499 aa23.45■■□□□ 1.34
GCA-210ENST00000487445 GRIN2BQ13224 1484 aa23.44■■□□□ 1.34
GCA-210ENST00000487445 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
GCA-210ENST00000487445 KIF21BO75037 1637 aa23.41■■□□□ 1.34
GCA-210ENST00000487445 EIF4G3O43432 1585 aaKnown RBP23.4■■□□□ 1.34
GCA-210ENST00000487445 SNAPC4Q5SXM2 1469 aa23.33■■□□□ 1.33
GCA-210ENST00000487445 TNIKQ9UKE5 1360 aa23.33■■□□□ 1.32
GCA-210ENST00000487445 FHAD1B1AJZ9 1412 aa23.32■■□□□ 1.32
GCA-210ENST00000487445 CUL7Q14999 1698 aa23.31■■□□□ 1.32
GCA-210ENST00000487445 PBRM1Q86U86 1689 aa23.31■■□□□ 1.32
GCA-210ENST00000487445 FBLN2P98095 1184 aa23.3■■□□□ 1.32
GCA-210ENST00000487445 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
GCA-210ENST00000487445 CHMP7Q8WUX9 453 aaPredicted RBP23.26■■□□□ 1.31
GCA-210ENST00000487445 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
GCA-210ENST00000487445 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
GCA-210ENST00000487445 CEP162Q5TB80 1403 aa23.18■■□□□ 1.3
GCA-210ENST00000487445 SYNJ2O15056 1496 aa23.18■■□□□ 1.3
GCA-210ENST00000487445 GRIN2AQ12879 1464 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms