RNA–Protein interactions for RNA: ENST00000487393.1

CTLA4-205, Transcript of cytotoxic T-lymphocyte associated protein 4, humanhuman

TSL 1 (best)

Gene CTLA4, Length 214 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4-205ENST00000487393 AEBP2Q6ZN18 517 aaPredicted RBP16.81■□□□□ 0.28
CTLA4-205ENST00000487393 CHIC1Q5VXU3 224 aa16.25■□□□□ 0.19
CTLA4-205ENST00000487393 NISCHQ9Y2I1 1504 aa16.01■□□□□ 0.15
CTLA4-205ENST00000487393 SENP3Q9H4L4 574 aaPredicted RBP14.5□□□□□ -0.09
CTLA4-205ENST00000487393 ABCC9O60706 1549 aa14.34□□□□□ -0.11
CTLA4-205ENST00000487393 CCDC180Q9P1Z9 1646 aa14.25□□□□□ -0.13
CTLA4-205ENST00000487393 PHF23Q9BUL5 403 aaPredicted RBP14.2□□□□□ -0.14
CTLA4-205ENST00000487393 DCAF8L2P0C7V8 631 aa13.89□□□□□ -0.19
CTLA4-205ENST00000487393 POTEDQ86YR6 584 aa13.75□□□□□ -0.21
CTLA4-205ENST00000487393 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
CTLA4-205ENST00000487393 FOXD1Q16676 465 aa13.56□□□□□ -0.24
CTLA4-205ENST00000487393 NACADO15069 1562 aa13.51□□□□□ -0.25
CTLA4-205ENST00000487393 PABPN1Q86U42 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTLA4-205ENST00000487393 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
CTLA4-205ENST00000487393 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
CTLA4-205ENST00000487393 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
CTLA4-205ENST00000487393 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
CTLA4-205ENST00000487393 UNC13AQ9UPW8 1703 aa13.21□□□□□ -0.3
CTLA4-205ENST00000487393 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
CTLA4-205ENST00000487393 SCRIBQ14160 1630 aa13.12□□□□□ -0.31
CTLA4-205ENST00000487393 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
CTLA4-205ENST00000487393 MSH5O43196 834 aa12.98□□□□□ -0.33
CTLA4-205ENST00000487393 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
CTLA4-205ENST00000487393 CECR2Q9BXF3 1484 aa12.88□□□□□ -0.35
CTLA4-205ENST00000487393 CC2D2AQ9P2K1 1620 aa12.88□□□□□ -0.35
CTLA4-205ENST00000487393 EIF4G1Q04637 1599 aaKnown RBP12.85□□□□□ -0.35
CTLA4-205ENST00000487393 ADRA2BP18089 450 aa12.59□□□□□ -0.39
CTLA4-205ENST00000487393 PIAS4Q8N2W9 510 aaPredicted RBP12.57□□□□□ -0.4
CTLA4-205ENST00000487393 PPP6R1Q9UPN7 881 aa12.54□□□□□ -0.4
CTLA4-205ENST00000487393 NCAPD3P42695 1498 aa12.46□□□□□ -0.41
CTLA4-205ENST00000487393 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.41
CTLA4-205ENST00000487393 SMARCA4P51532 1647 aa12.45□□□□□ -0.42
CTLA4-205ENST00000487393 SMARCA2P51531 1590 aa12.45□□□□□ -0.42
CTLA4-205ENST00000487393 ERCC6Q03468 1493 aa12.44□□□□□ -0.42
CTLA4-205ENST00000487393 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
CTLA4-205ENST00000487393 BAZ1BQ9UIG0 1483 aaKnown RBP12.41□□□□□ -0.42
CTLA4-205ENST00000487393 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
CTLA4-205ENST00000487393 HMGXB3Q12766 1538 aa12.34□□□□□ -0.43
CTLA4-205ENST00000487393 NESP48681 1621 aa12.29□□□□□ -0.44
CTLA4-205ENST00000487393 PEG3Q9GZU2 1588 aa12.24□□□□□ -0.45
CTLA4-205ENST00000487393 WIZO95785 1651 aa12.22□□□□□ -0.45
CTLA4-205ENST00000487393 CUX2O14529 1486 aa12.22□□□□□ -0.45
CTLA4-205ENST00000487393 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
CTLA4-205ENST00000487393 DNAJC5Q9H3Z4 198 aa12.2□□□□□ -0.46
CTLA4-205ENST00000487393 LAMC3Q9Y6N6 1575 aa12.18□□□□□ -0.46
CTLA4-205ENST00000487393 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
CTLA4-205ENST00000487393 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.46
CTLA4-205ENST00000487393 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
CTLA4-205ENST00000487393 TOP2AP11388 1531 aaKnown RBP12.04□□□□□ -0.48
CTLA4-205ENST00000487393 MRC2Q9UBG0 1479 aa12.03□□□□□ -0.48
CTLA4-205ENST00000487393 CEP164Q9UPV0 1460 aa12.03□□□□□ -0.48
CTLA4-205ENST00000487393 THOC2Q8NI27 1593 aaKnown RBP12.03□□□□□ -0.48
CTLA4-205ENST00000487393 FANCD2Q9BXW9 1451 aa12.02□□□□□ -0.48
CTLA4-205ENST00000487393 CFTRP13569 1480 aa11.98□□□□□ -0.49
CTLA4-205ENST00000487393 SUPT5HO00267 1087 aaKnown RBP11.98□□□□□ -0.49
CTLA4-205ENST00000487393 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.49
CTLA4-205ENST00000487393 WDR62O43379 1518 aa11.92□□□□□ -0.5
CTLA4-205ENST00000487393 TRIM41Q8WV44 630 aa11.9□□□□□ -0.5
CTLA4-205ENST00000487393 OSCARQ8IYS5 282 aa11.88□□□□□ -0.51
CTLA4-205ENST00000487393 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
CTLA4-205ENST00000487393 FBLN2P98095 1184 aa11.82□□□□□ -0.52
CTLA4-205ENST00000487393 PRDM2Q13029 1718 aa11.81□□□□□ -0.52
CTLA4-205ENST00000487393 ABCC8Q09428 1581 aa11.8□□□□□ -0.52
CTLA4-205ENST00000487393 IFT140Q96RY7 1462 aa11.77□□□□□ -0.52
CTLA4-205ENST00000487393 TOPBP1Q92547 1522 aa11.77□□□□□ -0.52
CTLA4-205ENST00000487393 ZNF608Q9ULD9 1512 aaPredicted RBP11.73□□□□□ -0.53
CTLA4-205ENST00000487393 DNMBPQ6XZF7 1577 aa11.72□□□□□ -0.53
CTLA4-205ENST00000487393 SCAF1Q9H7N4 1312 aaKnown RBP11.72□□□□□ -0.53
CTLA4-205ENST00000487393 SOGA1O94964 1423 aa11.71□□□□□ -0.53
CTLA4-205ENST00000487393 AQRO60306 1485 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTLA4-205ENST00000487393 TDRD9Q8NDG6 1382 aaKnown RBP11.68□□□□□ -0.54
CTLA4-205ENST00000487393 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
CTLA4-205ENST00000487393 RAD54L2Q9Y4B4 1467 aa11.67□□□□□ -0.54
CTLA4-205ENST00000487393 POLA1P09884 1462 aaPredicted RBP11.65□□□□□ -0.54
CTLA4-205ENST00000487393 EIF4G3O43432 1585 aaKnown RBP11.63□□□□□ -0.55
CTLA4-205ENST00000487393 CYB5RLQ6IPT4 315 aa11.63□□□□□ -0.55
CTLA4-205ENST00000487393 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
CTLA4-205ENST00000487393 PPP4R3CPQ6ZMV5 832 aa11.6□□□□□ -0.55
CTLA4-205ENST00000487393 TARBP1Q13395 1621 aaKnown RBP11.6□□□□□ -0.55
CTLA4-205ENST00000487393 CUX1P39880 1505 aa11.59□□□□□ -0.55
CTLA4-205ENST00000487393 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
CTLA4-205ENST00000487393 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
CTLA4-205ENST00000487393 SNAPC4Q5SXM2 1469 aa11.55□□□□□ -0.56
CTLA4-205ENST00000487393 CHD1O14646 1710 aa11.55□□□□□ -0.56
CTLA4-205ENST00000487393 GRIN2BQ13224 1484 aa11.54□□□□□ -0.56
CTLA4-205ENST00000487393 RIMBP3CA6NJZ7 1639 aa11.53□□□□□ -0.56
CTLA4-205ENST00000487393 RIMBP3BA6NNM3 1639 aa11.53□□□□□ -0.56
CTLA4-205ENST00000487393 RIMBP3Q9UFD9 1639 aa11.53□□□□□ -0.56
CTLA4-205ENST00000487393 GAPVD1Q14C86 1478 aa11.53□□□□□ -0.56
CTLA4-205ENST00000487393 WRNQ14191 1432 aaPredicted RBP eCLIP11.52□□□□□ -0.56
CTLA4-205ENST00000487393 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
CTLA4-205ENST00000487393 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
CTLA4-205ENST00000487393 WDR97A6NE52 1622 aa11.47□□□□□ -0.57
CTLA4-205ENST00000487393 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
CTLA4-205ENST00000487393 SYNJ2O15056 1496 aa11.46□□□□□ -0.57
CTLA4-205ENST00000487393 ABCA10Q8WWZ4 1543 aa11.45□□□□□ -0.58
CTLA4-205ENST00000487393 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
CTLA4-205ENST00000487393 MAPK8IP2Q13387 824 aaPredicted RBP11.42□□□□□ -0.58
CTLA4-205ENST00000487393 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
CTLA4-205ENST00000487393 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms