RNA–Protein interactions for RNA: ENST00000487335.5

FAM107B-221, Transcript of family with sequence similarity 107 member B, humanhuman

TSL 1 (best)

Gene FAM107B, Length 2,317 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM107B-221ENST00000487335 NISCHQ9Y2I1 1504 aa25.33■■□□□ 1.64
FAM107B-221ENST00000487335 CCDC180Q9P1Z9 1646 aa22.43■■□□□ 1.18
FAM107B-221ENST00000487335 ABCC9O60706 1549 aa21.54■■□□□ 1.04
FAM107B-221ENST00000487335 ZCCHC6Q5VYS8 1495 aaKnown RBP21.18■□□□□ 0.98
FAM107B-221ENST00000487335 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
FAM107B-221ENST00000487335 NACADO15069 1562 aa20.96■□□□□ 0.95
FAM107B-221ENST00000487335 MYO15BQ96JP2 1530 aa20.96■□□□□ 0.95
FAM107B-221ENST00000487335 RB1CC1Q8TDY2 1594 aa20.9■□□□□ 0.94
FAM107B-221ENST00000487335 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
FAM107B-221ENST00000487335 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
FAM107B-221ENST00000487335 SCRIBQ14160 1630 aa20.45■□□□□ 0.86
FAM107B-221ENST00000487335 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
FAM107B-221ENST00000487335 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
FAM107B-221ENST00000487335 SHROOM4Q9ULL8 1493 aa20.13■□□□□ 0.81
FAM107B-221ENST00000487335 EIF4G1Q04637 1599 aaKnown RBP19.71■□□□□ 0.75
FAM107B-221ENST00000487335 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
FAM107B-221ENST00000487335 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
FAM107B-221ENST00000487335 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
FAM107B-221ENST00000487335 CC2D2AQ9P2K1 1620 aa19.55■□□□□ 0.72
FAM107B-221ENST00000487335 MROH2BQ7Z745 1585 aa19.52■□□□□ 0.72
FAM107B-221ENST00000487335 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
FAM107B-221ENST00000487335 PEG3Q9GZU2 1588 aa19.43■□□□□ 0.7
FAM107B-221ENST00000487335 RSF1Q96T23 1441 aaPredicted RBP19.4■□□□□ 0.7
FAM107B-221ENST00000487335 SMARCA2P51531 1590 aa19.39■□□□□ 0.69
FAM107B-221ENST00000487335 ATAD2BQ9ULI0 1458 aa19.38■□□□□ 0.69
FAM107B-221ENST00000487335 WIZO95785 1651 aa19.36■□□□□ 0.69
FAM107B-221ENST00000487335 NCAPD3P42695 1498 aa19.32■□□□□ 0.68
FAM107B-221ENST00000487335 HMGXB3Q12766 1538 aa19.29■□□□□ 0.68
FAM107B-221ENST00000487335 BAZ1BQ9UIG0 1483 aaKnown RBP19.24■□□□□ 0.67
FAM107B-221ENST00000487335 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
FAM107B-221ENST00000487335 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
FAM107B-221ENST00000487335 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
FAM107B-221ENST00000487335 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
FAM107B-221ENST00000487335 NESP48681 1621 aa18.76■□□□□ 0.59
FAM107B-221ENST00000487335 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
FAM107B-221ENST00000487335 CFTRP13569 1480 aa18.73■□□□□ 0.59
FAM107B-221ENST00000487335 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
FAM107B-221ENST00000487335 KIF21AQ7Z4S6 1674 aa18.62■□□□□ 0.57
FAM107B-221ENST00000487335 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
FAM107B-221ENST00000487335 FANCD2Q9BXW9 1451 aa18.55■□□□□ 0.56
FAM107B-221ENST00000487335 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
FAM107B-221ENST00000487335 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
FAM107B-221ENST00000487335 THOC2Q8NI27 1593 aaKnown RBP18.46■□□□□ 0.55
FAM107B-221ENST00000487335 MRC2Q9UBG0 1479 aa18.41■□□□□ 0.54
FAM107B-221ENST00000487335 WDR62O43379 1518 aa18.37■□□□□ 0.53
FAM107B-221ENST00000487335 URB2Q14146 1524 aaKnown RBP18.37■□□□□ 0.53
FAM107B-221ENST00000487335 ABCC8Q09428 1581 aa18.33■□□□□ 0.53
FAM107B-221ENST00000487335 DNMBPQ6XZF7 1577 aa18.33■□□□□ 0.53
FAM107B-221ENST00000487335 TOPBP1Q92547 1522 aa18.31■□□□□ 0.52
FAM107B-221ENST00000487335 CUX1P39880 1505 aa18.3■□□□□ 0.52
FAM107B-221ENST00000487335 WRNQ14191 1432 aaPredicted RBP eCLIP18.27■□□□□ 0.52
FAM107B-221ENST00000487335 BIVM-ERCC5R4GMW8 1640 aa18.27■□□□□ 0.52
FAM107B-221ENST00000487335 SYNJ1O43426 1573 aa18.26■□□□□ 0.51
FAM107B-221ENST00000487335 CUX2O14529 1486 aa18.25■□□□□ 0.51
FAM107B-221ENST00000487335 TOP2BQ02880 1626 aa18.25■□□□□ 0.51
FAM107B-221ENST00000487335 POLA1P09884 1462 aaPredicted RBP18.17■□□□□ 0.5
FAM107B-221ENST00000487335 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
FAM107B-221ENST00000487335 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
FAM107B-221ENST00000487335 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
FAM107B-221ENST00000487335 WDR97A6NE52 1622 aa18.09■□□□□ 0.49
FAM107B-221ENST00000487335 RAD54L2Q9Y4B4 1467 aa18.07■□□□□ 0.48
FAM107B-221ENST00000487335 SOGA1O94964 1423 aa18.07■□□□□ 0.48
FAM107B-221ENST00000487335 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
FAM107B-221ENST00000487335 ABCA10Q8WWZ4 1543 aa18.02■□□□□ 0.48
FAM107B-221ENST00000487335 TRIM41Q8WV44 630 aa18.01■□□□□ 0.47
FAM107B-221ENST00000487335 ZNF608Q9ULD9 1512 aaPredicted RBP18■□□□□ 0.47
FAM107B-221ENST00000487335 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
FAM107B-221ENST00000487335 ABCA5Q8WWZ7 1642 aa17.96■□□□□ 0.47
FAM107B-221ENST00000487335 TDRD9Q8NDG6 1382 aaKnown RBP17.92■□□□□ 0.46
FAM107B-221ENST00000487335 AQRO60306 1485 aaKnown RBP eCLIP17.91■□□□□ 0.466e-7■□□□□ 11.3
FAM107B-221ENST00000487335 PBRM1Q86U86 1689 aa17.91■□□□□ 0.46
FAM107B-221ENST00000487335 GAPVD1Q14C86 1478 aa17.89■□□□□ 0.45
FAM107B-221ENST00000487335 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
FAM107B-221ENST00000487335 GRIN2BQ13224 1484 aa17.83■□□□□ 0.45
FAM107B-221ENST00000487335 ERICH3Q5RHP9 1530 aa17.82■□□□□ 0.44
FAM107B-221ENST00000487335 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
FAM107B-221ENST00000487335 SNAPC4Q5SXM2 1469 aa17.78■□□□□ 0.44
FAM107B-221ENST00000487335 MAGI1Q96QZ7 1491 aaPredicted RBP17.77■□□□□ 0.44
FAM107B-221ENST00000487335 ADAMTS12P58397 1594 aa17.75■□□□□ 0.43
FAM107B-221ENST00000487335 CUL7Q14999 1698 aa17.74■□□□□ 0.43
FAM107B-221ENST00000487335 EEA1Q15075 1411 aa17.74■□□□□ 0.43
FAM107B-221ENST00000487335 IGF1RP08069 1367 aa17.74■□□□□ 0.43
FAM107B-221ENST00000487335 CHD1O14646 1710 aa17.72■□□□□ 0.43
FAM107B-221ENST00000487335 SYNJ2O15056 1496 aa17.69■□□□□ 0.42
FAM107B-221ENST00000487335 FHAD1B1AJZ9 1412 aa17.68■□□□□ 0.42
FAM107B-221ENST00000487335 CARMIL1Q5VZK9 1371 aa17.63■□□□□ 0.41
FAM107B-221ENST00000487335 CSRNP3Q8WYN3 585 aa17.63■□□□□ 0.41
FAM107B-221ENST00000487335 PRXQ9BXM0 1461 aa17.62■□□□□ 0.41
FAM107B-221ENST00000487335 GRIN2AQ12879 1464 aa17.62■□□□□ 0.41
FAM107B-221ENST00000487335 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
FAM107B-221ENST00000487335 CHMP7Q8WUX9 453 aaPredicted RBP17.59■□□□□ 0.41
FAM107B-221ENST00000487335 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
FAM107B-221ENST00000487335 KIF21BO75037 1637 aa17.58■□□□□ 0.4
FAM107B-221ENST00000487335 FBLN2P98095 1184 aa17.57■□□□□ 0.4
FAM107B-221ENST00000487335 CEP170Q5SW79 1584 aa17.55■□□□□ 0.4
FAM107B-221ENST00000487335 NUP160Q12769 1436 aa17.54■□□□□ 0.4
FAM107B-221ENST00000487335 PELP1Q8IZL8 1130 aaKnown RBP17.53■□□□□ 0.4
FAM107B-221ENST00000487335 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
FAM107B-221ENST00000487335 CTTNBP2Q8WZ74 1663 aa17.49■□□□□ 0.39
FAM107B-221ENST00000487335 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms