RNA–Protein interactions for RNA: ENST00000487316.1

PTRHD1-205, Transcript of peptidyl-tRNA hydrolase domain containing 1, humanhuman

TSL 2

Gene PTRHD1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTRHD1-205ENST00000487316 NISCHQ9Y2I1 1504 aa53.17■■■■■ 6.1
PTRHD1-205ENST00000487316 CCDC180Q9P1Z9 1646 aa47.23■■■■■ 5.15
PTRHD1-205ENST00000487316 ABCC9O60706 1549 aa45.87■■■■■ 4.93
PTRHD1-205ENST00000487316 ZCCHC6Q5VYS8 1495 aaKnown RBP44.36■■■■■ 4.69
PTRHD1-205ENST00000487316 NACADO15069 1562 aa44.31■■■■■ 4.68
PTRHD1-205ENST00000487316 RB1CC1Q8TDY2 1594 aa44.3■■■■■ 4.68
PTRHD1-205ENST00000487316 DCAF8L2P0C7V8 631 aa44.23■■■■■ 4.67
PTRHD1-205ENST00000487316 MYO15BQ96JP2 1530 aa44.13■■■■■ 4.65
PTRHD1-205ENST00000487316 DCAF1Q9Y4B6 1507 aa44.04■■■■■ 4.64
PTRHD1-205ENST00000487316 UNC13AQ9UPW8 1703 aa43.34■■■■■ 4.53
PTRHD1-205ENST00000487316 SCRIBQ14160 1630 aa43.06■■■■■ 4.48
PTRHD1-205ENST00000487316 BICRAQ9NZM4 1560 aa42.94■■■■■ 4.46
PTRHD1-205ENST00000487316 PABPN1Q86U42 306 aaKnown RBP eCLIP42.87■■■■■ 4.45
PTRHD1-205ENST00000487316 SHROOM4Q9ULL8 1493 aa42.54■■■■■ 4.4
PTRHD1-205ENST00000487316 DNAJC5BQ9UF47 199 aa41.83■■■■■ 4.29
PTRHD1-205ENST00000487316 EIF4G1Q04637 1599 aaKnown RBP41.78■■■■■ 4.28
PTRHD1-205ENST00000487316 CC2D2AQ9P2K1 1620 aa41.55■■■■■ 4.24
PTRHD1-205ENST00000487316 CECR2Q9BXF3 1484 aa41.37■■■■■ 4.21
PTRHD1-205ENST00000487316 SMARCA4P51532 1647 aa41.23■■■■■ 4.19
PTRHD1-205ENST00000487316 BAZ1AQ9NRL2 1556 aaPredicted RBP41.21■■■■■ 4.19
PTRHD1-205ENST00000487316 MROH2BQ7Z745 1585 aa40.97■■■■■ 4.15
PTRHD1-205ENST00000487316 ATAD2BQ9ULI0 1458 aa40.91■■■■■ 4.14
PTRHD1-205ENST00000487316 SMARCA2P51531 1590 aa40.91■■■■■ 4.14
PTRHD1-205ENST00000487316 NCAPD3P42695 1498 aa40.85■■■■■ 4.13
PTRHD1-205ENST00000487316 PEG3Q9GZU2 1588 aa40.83■■■■■ 4.13
PTRHD1-205ENST00000487316 HMGXB3Q12766 1538 aa40.71■■■■■ 4.11
PTRHD1-205ENST00000487316 BAZ1BQ9UIG0 1483 aaKnown RBP40.59■■■■■ 4.09
PTRHD1-205ENST00000487316 RSF1Q96T23 1441 aaPredicted RBP40.59■■■■■ 4.09
PTRHD1-205ENST00000487316 WIZO95785 1651 aa40.57■■■■■ 4.09
PTRHD1-205ENST00000487316 TOP2AP11388 1531 aaKnown RBP40.16■■■■■ 4.02
PTRHD1-205ENST00000487316 NESP48681 1621 aa39.78■■■■□ 3.96
PTRHD1-205ENST00000487316 LAMC3Q9Y6N6 1575 aa39.77■■■■□ 3.96
PTRHD1-205ENST00000487316 SUPT5HO00267 1087 aaKnown RBP39.7■■■■□ 3.95
PTRHD1-205ENST00000487316 CADPSQ9ULU8 1353 aa39.66■■■■□ 3.94
PTRHD1-205ENST00000487316 CCDC88BA6NC98 1476 aa39.65■■■■□ 3.94
PTRHD1-205ENST00000487316 ERCC6Q03468 1493 aa39.54■■■■□ 3.92
PTRHD1-205ENST00000487316 CFTRP13569 1480 aa39.49■■■■□ 3.91
PTRHD1-205ENST00000487316 PDS5BQ9NTI5 1447 aa39.46■■■■□ 3.91
PTRHD1-205ENST00000487316 KIF21AQ7Z4S6 1674 aa39.38■■■■□ 3.89
PTRHD1-205ENST00000487316 PRDM2Q13029 1718 aa39.32■■■■□ 3.89
PTRHD1-205ENST00000487316 FANCD2Q9BXW9 1451 aa39.22■■■■□ 3.87
PTRHD1-205ENST00000487316 THOC2Q8NI27 1593 aaKnown RBP39.18■■■■□ 3.86
PTRHD1-205ENST00000487316 CEP164Q9UPV0 1460 aa39.16■■■■□ 3.86
PTRHD1-205ENST00000487316 CUX2O14529 1486 aa39.05■■■■□ 3.84
PTRHD1-205ENST00000487316 MRC2Q9UBG0 1479 aa39.05■■■■□ 3.84
PTRHD1-205ENST00000487316 WDR62O43379 1518 aa38.93■■■■□ 3.82
PTRHD1-205ENST00000487316 URB2Q14146 1524 aaKnown RBP38.81■■■■□ 3.8
PTRHD1-205ENST00000487316 ABCC8Q09428 1581 aa38.65■■■■□ 3.78
PTRHD1-205ENST00000487316 TOPBP1Q92547 1522 aa38.63■■■■□ 3.78
PTRHD1-205ENST00000487316 DNMBPQ6XZF7 1577 aa38.63■■■■□ 3.77
PTRHD1-205ENST00000487316 CUX1P39880 1505 aa38.43■■■■□ 3.74
PTRHD1-205ENST00000487316 IFT140Q96RY7 1462 aa38.33■■■■□ 3.73
PTRHD1-205ENST00000487316 POLA1P09884 1462 aaPredicted RBP38.31■■■■□ 3.72
PTRHD1-205ENST00000487316 WRNQ14191 1432 aaPredicted RBP eCLIP38.27■■■■□ 3.72
PTRHD1-205ENST00000487316 FGD5Q6ZNL6 1462 aa38.26■■■■□ 3.72
PTRHD1-205ENST00000487316 TARBP1Q13395 1621 aaKnown RBP38.2■■■■□ 3.71
PTRHD1-205ENST00000487316 BIVM-ERCC5R4GMW8 1640 aa38.2■■■■□ 3.71
PTRHD1-205ENST00000487316 TOP2BQ02880 1626 aa38.19■■■■□ 3.7
PTRHD1-205ENST00000487316 SYNJ1O43426 1573 aa38.18■■■■□ 3.7
PTRHD1-205ENST00000487316 SOGA1O94964 1423 aa38.14■■■■□ 3.7
PTRHD1-205ENST00000487316 RAD54L2Q9Y4B4 1467 aa38.13■■■■□ 3.69
PTRHD1-205ENST00000487316 ZNF608Q9ULD9 1512 aaPredicted RBP38.11■■■■□ 3.69
PTRHD1-205ENST00000487316 EIF4G3O43432 1585 aaKnown RBP38.02■■■■□ 3.68
PTRHD1-205ENST00000487316 WDR97A6NE52 1622 aa37.99■■■■□ 3.67
PTRHD1-205ENST00000487316 ABCA10Q8WWZ4 1543 aa37.92■■■■□ 3.66
PTRHD1-205ENST00000487316 AQRO60306 1485 aaKnown RBP eCLIP37.91■■■■□ 3.66
PTRHD1-205ENST00000487316 TDRD9Q8NDG6 1382 aaKnown RBP37.88■■■■□ 3.65
PTRHD1-205ENST00000487316 ABCA5Q8WWZ7 1642 aa37.76■■■■□ 3.64
PTRHD1-205ENST00000487316 GAPVD1Q14C86 1478 aa37.72■■■■□ 3.63
PTRHD1-205ENST00000487316 PBRM1Q86U86 1689 aa37.69■■■■□ 3.62
PTRHD1-205ENST00000487316 GRIN2BQ13224 1484 aa37.69■■■■□ 3.62
PTRHD1-205ENST00000487316 SNAPC4Q5SXM2 1469 aa37.6■■■■□ 3.61
PTRHD1-205ENST00000487316 MAGI1Q96QZ7 1491 aaPredicted RBP37.58■■■■□ 3.61
PTRHD1-205ENST00000487316 CHD1O14646 1710 aa37.51■■■■□ 3.6
PTRHD1-205ENST00000487316 TRIM41Q8WV44 630 aa37.5■■■■□ 3.59
PTRHD1-205ENST00000487316 DNAJC5Q9H3Z4 198 aa37.5■■■■□ 3.59
PTRHD1-205ENST00000487316 ERICH3Q5RHP9 1530 aa37.47■■■■□ 3.59
PTRHD1-205ENST00000487316 KIF27Q86VH2 1401 aa37.44■■■■□ 3.58
PTRHD1-205ENST00000487316 OSCARQ8IYS5 282 aa37.43■■■■□ 3.58
PTRHD1-205ENST00000487316 SYNJ2O15056 1496 aa37.41■■■■□ 3.58
PTRHD1-205ENST00000487316 ADAMTS12P58397 1594 aa37.38■■■■□ 3.58
PTRHD1-205ENST00000487316 FBLN2P98095 1184 aa37.38■■■■□ 3.57
PTRHD1-205ENST00000487316 CHMP7Q8WUX9 453 aaPredicted RBP37.34■■■■□ 3.57
PTRHD1-205ENST00000487316 FHAD1B1AJZ9 1412 aa37.29■■■■□ 3.56
PTRHD1-205ENST00000487316 IGF1RP08069 1367 aa37.24■■■■□ 3.55
PTRHD1-205ENST00000487316 CHIC1Q5VXU3 224 aa37.21■■■■□ 3.55
PTRHD1-205ENST00000487316 CUL7Q14999 1698 aa37.21■■■■□ 3.55
PTRHD1-205ENST00000487316 GRIN2AQ12879 1464 aa37.2■■■■□ 3.55
PTRHD1-205ENST00000487316 RUSC2Q8N2Y8 1516 aa37.17■■■■□ 3.54
PTRHD1-205ENST00000487316 CLASP1Q7Z460 1538 aa37.09■■■■□ 3.53
PTRHD1-205ENST00000487316 CARMIL1Q5VZK9 1371 aa37.04■■■■□ 3.52
PTRHD1-205ENST00000487316 NUP160Q12769 1436 aa37.03■■■■□ 3.52
PTRHD1-205ENST00000487316 CEP170Q5SW79 1584 aa37.02■■■■□ 3.52
PTRHD1-205ENST00000487316 EEA1Q15075 1411 aa36.92■■■■□ 3.5
PTRHD1-205ENST00000487316 RAPGEF2Q9Y4G8 1499 aa36.87■■■■□ 3.49
PTRHD1-205ENST00000487316 ARHGEF11O15085 1522 aa36.86■■■■□ 3.49
PTRHD1-205ENST00000487316 RIMBP3CA6NJZ7 1639 aa36.86■■■■□ 3.49
PTRHD1-205ENST00000487316 RIMBP3BA6NNM3 1639 aa36.86■■■■□ 3.49
PTRHD1-205ENST00000487316 RIMBP3Q9UFD9 1639 aa36.86■■■■□ 3.49
PTRHD1-205ENST00000487316 PRXQ9BXM0 1461 aa36.8■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms