RNA–Protein interactions for RNA: ENST00000486862.1

OPTN-211, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-211ENST00000486862 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
OPTN-211ENST00000486862 CCDC180Q9P1Z9 1646 aa21.94■■□□□ 1.1
OPTN-211ENST00000486862 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
OPTN-211ENST00000486862 DCAF1Q9Y4B6 1507 aa20.77■□□□□ 0.92
OPTN-211ENST00000486862 ABCC9O60706 1549 aa20.73■□□□□ 0.91
OPTN-211ENST00000486862 MYO15BQ96JP2 1530 aa20.61■□□□□ 0.89
OPTN-211ENST00000486862 DCAF8L2P0C7V8 631 aa20.52■□□□□ 0.88
OPTN-211ENST00000486862 NACADO15069 1562 aa20.46■□□□□ 0.87
OPTN-211ENST00000486862 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
OPTN-211ENST00000486862 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
OPTN-211ENST00000486862 SCRIBQ14160 1630 aa20.02■□□□□ 0.79
OPTN-211ENST00000486862 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
OPTN-211ENST00000486862 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
OPTN-211ENST00000486862 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
OPTN-211ENST00000486862 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
OPTN-211ENST00000486862 BAZ1AQ9NRL2 1556 aaPredicted RBP19.33■□□□□ 0.69
OPTN-211ENST00000486862 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
OPTN-211ENST00000486862 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
OPTN-211ENST00000486862 MROH2BQ7Z745 1585 aa19.28■□□□□ 0.68
OPTN-211ENST00000486862 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
OPTN-211ENST00000486862 WIZO95785 1651 aa19.1■□□□□ 0.65
OPTN-211ENST00000486862 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
OPTN-211ENST00000486862 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
OPTN-211ENST00000486862 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
OPTN-211ENST00000486862 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
OPTN-211ENST00000486862 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
OPTN-211ENST00000486862 NCAPD3P42695 1498 aa18.89■□□□□ 0.61
OPTN-211ENST00000486862 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
OPTN-211ENST00000486862 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
OPTN-211ENST00000486862 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
OPTN-211ENST00000486862 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
OPTN-211ENST00000486862 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
OPTN-211ENST00000486862 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
OPTN-211ENST00000486862 CFTRP13569 1480 aa18.39■□□□□ 0.54
OPTN-211ENST00000486862 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
OPTN-211ENST00000486862 PRDM2Q13029 1718 aa18.3■□□□□ 0.52
OPTN-211ENST00000486862 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
OPTN-211ENST00000486862 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
OPTN-211ENST00000486862 TRIM41Q8WV44 630 aa18.21■□□□□ 0.51
OPTN-211ENST00000486862 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
OPTN-211ENST00000486862 NESP48681 1621 aa18.16■□□□□ 0.5
OPTN-211ENST00000486862 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
OPTN-211ENST00000486862 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
OPTN-211ENST00000486862 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
OPTN-211ENST00000486862 PDS5BQ9NTI5 1447 aa18.08■□□□□ 0.49
OPTN-211ENST00000486862 TOP2BQ02880 1626 aa18.08■□□□□ 0.48
OPTN-211ENST00000486862 CUX1P39880 1505 aa18.04■□□□□ 0.48
OPTN-211ENST00000486862 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
OPTN-211ENST00000486862 KIF21AQ7Z4S6 1674 aa17.97■□□□□ 0.47
OPTN-211ENST00000486862 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.47
OPTN-211ENST00000486862 TOPBP1Q92547 1522 aa17.92■□□□□ 0.46
OPTN-211ENST00000486862 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
OPTN-211ENST00000486862 EEA1Q15075 1411 aa17.89■□□□□ 0.46
OPTN-211ENST00000486862 SOGA1O94964 1423 aa17.88■□□□□ 0.45
OPTN-211ENST00000486862 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
OPTN-211ENST00000486862 MRC2Q9UBG0 1479 aa17.86■□□□□ 0.45
OPTN-211ENST00000486862 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
OPTN-211ENST00000486862 RUSC2Q8N2Y8 1516 aa17.81■□□□□ 0.44
OPTN-211ENST00000486862 WDR62O43379 1518 aa17.8■□□□□ 0.44
OPTN-211ENST00000486862 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
OPTN-211ENST00000486862 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
OPTN-211ENST00000486862 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
OPTN-211ENST00000486862 KIF27Q86VH2 1401 aa17.75■□□□□ 0.43
OPTN-211ENST00000486862 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
OPTN-211ENST00000486862 ABCA10Q8WWZ4 1543 aa17.75■□□□□ 0.43
OPTN-211ENST00000486862 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
OPTN-211ENST00000486862 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
OPTN-211ENST00000486862 CUX2O14529 1486 aa17.7■□□□□ 0.42
OPTN-211ENST00000486862 LOC105371045A0A1W2PR82 267 aa17.69■□□□□ 0.42
OPTN-211ENST00000486862 TARBP1Q13395 1621 aaKnown RBP17.68■□□□□ 0.42
OPTN-211ENST00000486862 KIF21BO75037 1637 aa17.65■□□□□ 0.42
OPTN-211ENST00000486862 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
OPTN-211ENST00000486862 PRXQ9BXM0 1461 aa17.62■□□□□ 0.41
OPTN-211ENST00000486862 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
OPTN-211ENST00000486862 IGF1RP08069 1367 aa17.61■□□□□ 0.41
OPTN-211ENST00000486862 GOLGA3Q08378 1498 aa17.59■□□□□ 0.41
OPTN-211ENST00000486862 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.41
OPTN-211ENST00000486862 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
OPTN-211ENST00000486862 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
OPTN-211ENST00000486862 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
OPTN-211ENST00000486862 RAPGEF2Q9Y4G8 1499 aa17.52■□□□□ 0.4
OPTN-211ENST00000486862 CUL7Q14999 1698 aa17.51■□□□□ 0.39
OPTN-211ENST00000486862 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
OPTN-211ENST00000486862 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.39
OPTN-211ENST00000486862 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
OPTN-211ENST00000486862 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
OPTN-211ENST00000486862 GRIN2BQ13224 1484 aa17.45■□□□□ 0.38
OPTN-211ENST00000486862 EHMT2Q96KQ7 1210 aa17.45■□□□□ 0.38
OPTN-211ENST00000486862 EIF4G3O43432 1585 aaKnown RBP17.44■□□□□ 0.38
OPTN-211ENST00000486862 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
OPTN-211ENST00000486862 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
OPTN-211ENST00000486862 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
OPTN-211ENST00000486862 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
OPTN-211ENST00000486862 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
OPTN-211ENST00000486862 MAGI1Q96QZ7 1491 aaPredicted RBP17.35■□□□□ 0.37
OPTN-211ENST00000486862 SNAPC4Q5SXM2 1469 aa17.32■□□□□ 0.36
OPTN-211ENST00000486862 CLIP1P30622 1438 aa17.29■□□□□ 0.36
OPTN-211ENST00000486862 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
OPTN-211ENST00000486862 SYNJ2O15056 1496 aa17.26■□□□□ 0.35
OPTN-211ENST00000486862 GRIN2AQ12879 1464 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms