RNA–Protein interactions for RNA: ENST00000486862.1

OPTN-211, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-211ENST00000486862 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
OPTN-211ENST00000486862 CCDC180Q9P1Z9 1646 aa21.94■■□□□ 1.1
OPTN-211ENST00000486862 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
OPTN-211ENST00000486862 DCAF1Q9Y4B6 1507 aa20.77■□□□□ 0.92
OPTN-211ENST00000486862 ABCC9O60706 1549 aa20.73■□□□□ 0.91
OPTN-211ENST00000486862 MYO15BQ96JP2 1530 aa20.61■□□□□ 0.89
OPTN-211ENST00000486862 DCAF8L2P0C7V8 631 aa20.52■□□□□ 0.88
OPTN-211ENST00000486862 NACADO15069 1562 aa20.46■□□□□ 0.87
OPTN-211ENST00000486862 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
OPTN-211ENST00000486862 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
OPTN-211ENST00000486862 SCRIBQ14160 1630 aa20.02■□□□□ 0.79
OPTN-211ENST00000486862 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
OPTN-211ENST00000486862 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
OPTN-211ENST00000486862 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
OPTN-211ENST00000486862 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
OPTN-211ENST00000486862 BAZ1AQ9NRL2 1556 aaPredicted RBP19.33■□□□□ 0.69
OPTN-211ENST00000486862 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
OPTN-211ENST00000486862 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
OPTN-211ENST00000486862 MROH2BQ7Z745 1585 aa19.28■□□□□ 0.68
OPTN-211ENST00000486862 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
OPTN-211ENST00000486862 WIZO95785 1651 aa19.1■□□□□ 0.65
OPTN-211ENST00000486862 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
OPTN-211ENST00000486862 EIF4G1Q04637 1599 aaKnown RBP19.07■□□□□ 0.64
OPTN-211ENST00000486862 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
OPTN-211ENST00000486862 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
OPTN-211ENST00000486862 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
OPTN-211ENST00000486862 NCAPD3P42695 1498 aa18.89■□□□□ 0.61
OPTN-211ENST00000486862 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
OPTN-211ENST00000486862 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
OPTN-211ENST00000486862 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
OPTN-211ENST00000486862 CCDC88BA6NC98 1476 aa18.73■□□□□ 0.59
OPTN-211ENST00000486862 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
OPTN-211ENST00000486862 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
OPTN-211ENST00000486862 CFTRP13569 1480 aa18.39■□□□□ 0.54
OPTN-211ENST00000486862 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
OPTN-211ENST00000486862 PRDM2Q13029 1718 aa18.3■□□□□ 0.52
OPTN-211ENST00000486862 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
OPTN-211ENST00000486862 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
OPTN-211ENST00000486862 TRIM41Q8WV44 630 aa18.21■□□□□ 0.51
OPTN-211ENST00000486862 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
OPTN-211ENST00000486862 NESP48681 1621 aa18.16■□□□□ 0.5
OPTN-211ENST00000486862 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
OPTN-211ENST00000486862 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
OPTN-211ENST00000486862 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
OPTN-211ENST00000486862 PDS5BQ9NTI5 1447 aa18.08■□□□□ 0.49
OPTN-211ENST00000486862 TOP2BQ02880 1626 aa18.08■□□□□ 0.48
OPTN-211ENST00000486862 CUX1P39880 1505 aa18.04■□□□□ 0.48
OPTN-211ENST00000486862 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
OPTN-211ENST00000486862 KIF21AQ7Z4S6 1674 aa17.97■□□□□ 0.47
OPTN-211ENST00000486862 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.47
OPTN-211ENST00000486862 TOPBP1Q92547 1522 aa17.92■□□□□ 0.46
OPTN-211ENST00000486862 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
OPTN-211ENST00000486862 EEA1Q15075 1411 aa17.89■□□□□ 0.46
OPTN-211ENST00000486862 SOGA1O94964 1423 aa17.88■□□□□ 0.45
OPTN-211ENST00000486862 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
OPTN-211ENST00000486862 MRC2Q9UBG0 1479 aa17.86■□□□□ 0.45
OPTN-211ENST00000486862 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
OPTN-211ENST00000486862 RUSC2Q8N2Y8 1516 aa17.81■□□□□ 0.44
OPTN-211ENST00000486862 WDR62O43379 1518 aa17.8■□□□□ 0.44
OPTN-211ENST00000486862 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
OPTN-211ENST00000486862 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
OPTN-211ENST00000486862 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
OPTN-211ENST00000486862 KIF27Q86VH2 1401 aa17.75■□□□□ 0.43
OPTN-211ENST00000486862 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
OPTN-211ENST00000486862 ABCA10Q8WWZ4 1543 aa17.75■□□□□ 0.43
OPTN-211ENST00000486862 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
OPTN-211ENST00000486862 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
OPTN-211ENST00000486862 CUX2O14529 1486 aa17.7■□□□□ 0.42
OPTN-211ENST00000486862 LOC105371045A0A1W2PR82 267 aa17.69■□□□□ 0.42
OPTN-211ENST00000486862 TARBP1Q13395 1621 aaKnown RBP17.68■□□□□ 0.42
OPTN-211ENST00000486862 KIF21BO75037 1637 aa17.65■□□□□ 0.42
OPTN-211ENST00000486862 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
OPTN-211ENST00000486862 PRXQ9BXM0 1461 aa17.62■□□□□ 0.41
OPTN-211ENST00000486862 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
OPTN-211ENST00000486862 IGF1RP08069 1367 aa17.61■□□□□ 0.41
OPTN-211ENST00000486862 GOLGA3Q08378 1498 aa17.59■□□□□ 0.41
OPTN-211ENST00000486862 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.41
OPTN-211ENST00000486862 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
OPTN-211ENST00000486862 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
OPTN-211ENST00000486862 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
OPTN-211ENST00000486862 RAPGEF2Q9Y4G8 1499 aa17.52■□□□□ 0.4
OPTN-211ENST00000486862 CUL7Q14999 1698 aa17.51■□□□□ 0.39
OPTN-211ENST00000486862 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
OPTN-211ENST00000486862 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.39
OPTN-211ENST00000486862 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
OPTN-211ENST00000486862 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
OPTN-211ENST00000486862 GRIN2BQ13224 1484 aa17.45■□□□□ 0.38
OPTN-211ENST00000486862 EHMT2Q96KQ7 1210 aa17.45■□□□□ 0.38
OPTN-211ENST00000486862 EIF4G3O43432 1585 aaKnown RBP17.44■□□□□ 0.38
OPTN-211ENST00000486862 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
OPTN-211ENST00000486862 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
OPTN-211ENST00000486862 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
OPTN-211ENST00000486862 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
OPTN-211ENST00000486862 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
OPTN-211ENST00000486862 MAGI1Q96QZ7 1491 aaPredicted RBP17.35■□□□□ 0.37
OPTN-211ENST00000486862 SNAPC4Q5SXM2 1469 aa17.32■□□□□ 0.36
OPTN-211ENST00000486862 CLIP1P30622 1438 aa17.29■□□□□ 0.36
OPTN-211ENST00000486862 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
OPTN-211ENST00000486862 SYNJ2O15056 1496 aa17.26■□□□□ 0.35
OPTN-211ENST00000486862 GRIN2AQ12879 1464 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms