RNA–Protein interactions for RNA: ENST00000486738.5

EMD-207, Transcript of emerin, humanhuman

TSL 3

Gene EMD, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMD-207ENST00000486738 NISCHQ9Y2I1 1504 aa42.15■■■■■ 4.34
EMD-207ENST00000486738 CCDC180Q9P1Z9 1646 aa37.39■■■■□ 3.58
EMD-207ENST00000486738 ABCC9O60706 1549 aa36.67■■■■□ 3.46
EMD-207ENST00000486738 DCAF8L2P0C7V8 631 aa35.44■■■■□ 3.26
EMD-207ENST00000486738 RB1CC1Q8TDY2 1594 aa35.25■■■■□ 3.23
EMD-207ENST00000486738 NACADO15069 1562 aa35.21■■■■□ 3.23
EMD-207ENST00000486738 ZCCHC6Q5VYS8 1495 aaKnown RBP35.09■■■■□ 3.21
EMD-207ENST00000486738 MYO15BQ96JP2 1530 aa34.98■■■■□ 3.19
EMD-207ENST00000486738 DCAF1Q9Y4B6 1507 aa34.85■■■■□ 3.17
EMD-207ENST00000486738 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
EMD-207ENST00000486738 UNC13AQ9UPW8 1703 aa34.31■■■■□ 3.08
EMD-207ENST00000486738 SCRIBQ14160 1630 aa34.19■■■■□ 3.06
EMD-207ENST00000486738 BICRAQ9NZM4 1560 aa34.11■■■■□ 3.05
EMD-207ENST00000486738 SHROOM4Q9ULL8 1493 aa33.8■■■■□ 3
EMD-207ENST00000486738 DNAJC5BQ9UF47 199 aa33.73■■■□□ 2.99
EMD-207ENST00000486738 EIF4G1Q04637 1599 aaKnown RBP33.26■■■□□ 2.91
EMD-207ENST00000486738 CC2D2AQ9P2K1 1620 aa33.11■■■□□ 2.89
EMD-207ENST00000486738 CECR2Q9BXF3 1484 aa32.95■■■□□ 2.87
EMD-207ENST00000486738 BAZ1AQ9NRL2 1556 aaPredicted RBP32.68■■■□□ 2.82
EMD-207ENST00000486738 SMARCA4P51532 1647 aa32.67■■■□□ 2.82
EMD-207ENST00000486738 ATAD2BQ9ULI0 1458 aa32.53■■■□□ 2.8
EMD-207ENST00000486738 NCAPD3P42695 1498 aa32.51■■■□□ 2.79
EMD-207ENST00000486738 SMARCA2P51531 1590 aa32.49■■■□□ 2.79
EMD-207ENST00000486738 MROH2BQ7Z745 1585 aa32.48■■■□□ 2.79
EMD-207ENST00000486738 PEG3Q9GZU2 1588 aa32.32■■■□□ 2.77
EMD-207ENST00000486738 HMGXB3Q12766 1538 aa32.31■■■□□ 2.76
EMD-207ENST00000486738 BAZ1BQ9UIG0 1483 aaKnown RBP32.29■■■□□ 2.76
EMD-207ENST00000486738 RSF1Q96T23 1441 aaPredicted RBP32.16■■■□□ 2.74
EMD-207ENST00000486738 WIZO95785 1651 aa32.11■■■□□ 2.73
EMD-207ENST00000486738 TOP2AP11388 1531 aaKnown RBP31.79■■■□□ 2.68
EMD-207ENST00000486738 NESP48681 1621 aa31.71■■■□□ 2.67
EMD-207ENST00000486738 ERCC6Q03468 1493 aa31.66■■■□□ 2.66
EMD-207ENST00000486738 LAMC3Q9Y6N6 1575 aa31.63■■■□□ 2.65
EMD-207ENST00000486738 CADPSQ9ULU8 1353 aa31.61■■■□□ 2.65
EMD-207ENST00000486738 SUPT5HO00267 1087 aaKnown RBP31.52■■■□□ 2.64
EMD-207ENST00000486738 PDS5BQ9NTI5 1447 aa31.5■■■□□ 2.63
EMD-207ENST00000486738 CCDC88BA6NC98 1476 aa31.46■■■□□ 2.63
EMD-207ENST00000486738 CFTRP13569 1480 aa31.38■■■□□ 2.61
EMD-207ENST00000486738 CUX2O14529 1486 aa31.27■■■□□ 2.6
EMD-207ENST00000486738 KIF21AQ7Z4S6 1674 aa31.26■■■□□ 2.6
EMD-207ENST00000486738 FANCD2Q9BXW9 1451 aa31.22■■■□□ 2.59
EMD-207ENST00000486738 CEP164Q9UPV0 1460 aa31.19■■■□□ 2.58
EMD-207ENST00000486738 THOC2Q8NI27 1593 aaKnown RBP31.14■■■□□ 2.58
EMD-207ENST00000486738 MRC2Q9UBG0 1479 aa31.12■■■□□ 2.57
EMD-207ENST00000486738 PRDM2Q13029 1718 aa31.02■■■□□ 2.56
EMD-207ENST00000486738 WDR62O43379 1518 aa30.96■■■□□ 2.55
EMD-207ENST00000486738 URB2Q14146 1524 aaKnown RBP30.87■■■□□ 2.53
EMD-207ENST00000486738 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
EMD-207ENST00000486738 TOPBP1Q92547 1522 aa30.7■■■□□ 2.51
EMD-207ENST00000486738 DNAJC5Q9H3Z4 198 aa30.7■■■□□ 2.51
EMD-207ENST00000486738 DNMBPQ6XZF7 1577 aa30.65■■■□□ 2.5
EMD-207ENST00000486738 IFT140Q96RY7 1462 aa30.54■■■□□ 2.48
EMD-207ENST00000486738 CUX1P39880 1505 aa30.47■■■□□ 2.47
EMD-207ENST00000486738 POLA1P09884 1462 aaPredicted RBP30.44■■■□□ 2.46
EMD-207ENST00000486738 SOGA1O94964 1423 aa30.4■■■□□ 2.46
EMD-207ENST00000486738 FGD5Q6ZNL6 1462 aa30.38■■■□□ 2.45
EMD-207ENST00000486738 ZNF608Q9ULD9 1512 aaPredicted RBP30.36■■■□□ 2.45
EMD-207ENST00000486738 WRNQ14191 1432 aaPredicted RBP eCLIP30.35■■■□□ 2.45
EMD-207ENST00000486738 RAD54L2Q9Y4B4 1467 aa30.34■■■□□ 2.45
EMD-207ENST00000486738 TARBP1Q13395 1621 aaKnown RBP30.31■■■□□ 2.44
EMD-207ENST00000486738 AQRO60306 1485 aaKnown RBP eCLIP30.24■■■□□ 2.431e-22■■■■■ 43.7
EMD-207ENST00000486738 TDRD9Q8NDG6 1382 aaKnown RBP30.22■■■□□ 2.43
EMD-207ENST00000486738 TOP2BQ02880 1626 aa30.21■■■□□ 2.43
EMD-207ENST00000486738 EIF4G3O43432 1585 aaKnown RBP30.2■■■□□ 2.43
EMD-207ENST00000486738 SYNJ1O43426 1573 aa30.19■■■□□ 2.42
EMD-207ENST00000486738 BIVM-ERCC5R4GMW8 1640 aa30.17■■■□□ 2.42
EMD-207ENST00000486738 WDR97A6NE52 1622 aa30.09■■■□□ 2.41
EMD-207ENST00000486738 ABCA10Q8WWZ4 1543 aa30.08■■■□□ 2.41
EMD-207ENST00000486738 OSCARQ8IYS5 282 aa30.08■■■□□ 2.41
EMD-207ENST00000486738 GAPVD1Q14C86 1478 aa30.01■■■□□ 2.4
EMD-207ENST00000486738 GRIN2BQ13224 1484 aa30■■■□□ 2.39
EMD-207ENST00000486738 FBLN2P98095 1184 aa30■■■□□ 2.39
EMD-207ENST00000486738 SNAPC4Q5SXM2 1469 aa29.94■■■□□ 2.38
EMD-207ENST00000486738 ABCA5Q8WWZ7 1642 aa29.9■■■□□ 2.38
EMD-207ENST00000486738 CHMP7Q8WUX9 453 aaPredicted RBP29.9■■■□□ 2.38
EMD-207ENST00000486738 MAGI1Q96QZ7 1491 aaPredicted RBP29.9■■■□□ 2.38
EMD-207ENST00000486738 PBRM1Q86U86 1689 aa29.84■■■□□ 2.37
EMD-207ENST00000486738 CHD1O14646 1710 aa29.79■■■□□ 2.36
EMD-207ENST00000486738 SYNJ2O15056 1496 aa29.79■■■□□ 2.36
EMD-207ENST00000486738 TRIM41Q8WV44 630 aa29.78■■■□□ 2.36
EMD-207ENST00000486738 KIF27Q86VH2 1401 aa29.74■■■□□ 2.35
EMD-207ENST00000486738 ERICH3Q5RHP9 1530 aa29.72■■■□□ 2.35
EMD-207ENST00000486738 FHAD1B1AJZ9 1412 aa29.68■■■□□ 2.34
EMD-207ENST00000486738 ADAMTS12P58397 1594 aa29.63■■■□□ 2.33
EMD-207ENST00000486738 IGF1RP08069 1367 aa29.6■■■□□ 2.33
EMD-207ENST00000486738 GRIN2AQ12879 1464 aa29.59■■■□□ 2.33
EMD-207ENST00000486738 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
EMD-207ENST00000486738 RIMBP3CA6NJZ7 1639 aa29.48■■■□□ 2.31
EMD-207ENST00000486738 RIMBP3BA6NNM3 1639 aa29.48■■■□□ 2.31
EMD-207ENST00000486738 RIMBP3Q9UFD9 1639 aa29.48■■■□□ 2.31
EMD-207ENST00000486738 ARHGEF11O15085 1522 aa29.45■■■□□ 2.31
EMD-207ENST00000486738 CARMIL1Q5VZK9 1371 aa29.45■■■□□ 2.31
EMD-207ENST00000486738 CUL7Q14999 1698 aa29.44■■■□□ 2.3
EMD-207ENST00000486738 NUP160Q12769 1436 aa29.44■■■□□ 2.3
EMD-207ENST00000486738 RUSC2Q8N2Y8 1516 aa29.42■■■□□ 2.3
EMD-207ENST00000486738 CEP170Q5SW79 1584 aa29.4■■■□□ 2.3
EMD-207ENST00000486738 CHIC1Q5VXU3 224 aa29.37■■■□□ 2.29
EMD-207ENST00000486738 CYB5RLQ6IPT4 315 aa29.32■■■□□ 2.28
EMD-207ENST00000486738 JPH4Q96JJ6 628 aa29.27■■■□□ 2.28
EMD-207ENST00000486738 RAPGEF2Q9Y4G8 1499 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms