RNA–Protein interactions for RNA: ENST00000486511.5

EPHB6-205, Transcript of EPH receptor B6, humanhuman

TSL 1 (best)

Gene EPHB6, Length 2,300 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB6-205ENST00000486511 NISCHQ9Y2I1 1504 aa40.03■■■■■ 4
EPHB6-205ENST00000486511 CCDC180Q9P1Z9 1646 aa35.17■■■■□ 3.22
EPHB6-205ENST00000486511 ABCC9O60706 1549 aa33.94■■■■□ 3.02
EPHB6-205ENST00000486511 ZCCHC6Q5VYS8 1495 aaKnown RBP33.48■■■□□ 2.95
EPHB6-205ENST00000486511 DCAF8L2P0C7V8 631 aa33.3■■■□□ 2.92
EPHB6-205ENST00000486511 DCAF1Q9Y4B6 1507 aa33.05■■■□□ 2.88
EPHB6-205ENST00000486511 NACADO15069 1562 aa32.93■■■□□ 2.86
EPHB6-205ENST00000486511 MYO15BQ96JP2 1530 aa32.91■■■□□ 2.86
EPHB6-205ENST00000486511 RB1CC1Q8TDY2 1594 aa32.81■■■□□ 2.84
EPHB6-205ENST00000486511 SCRIBQ14160 1630 aa32.3■■■□□ 2.76
EPHB6-205ENST00000486511 SHROOM4Q9ULL8 1493 aa32.22■■■□□ 2.75
EPHB6-205ENST00000486511 UNC13AQ9UPW8 1703 aa32.18■■■□□ 2.74
EPHB6-205ENST00000486511 PABPN1Q86U42 306 aaKnown RBP eCLIP31.9■■■□□ 2.7
EPHB6-205ENST00000486511 BICRAQ9NZM4 1560 aa31.9■■■□□ 2.7
EPHB6-205ENST00000486511 CECR2Q9BXF3 1484 aa31.2■■■□□ 2.59
EPHB6-205ENST00000486511 EIF4G1Q04637 1599 aaKnown RBP30.97■■■□□ 2.55
EPHB6-205ENST00000486511 BAZ1AQ9NRL2 1556 aaPredicted RBP30.93■■■□□ 2.54
EPHB6-205ENST00000486511 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
EPHB6-205ENST00000486511 SMARCA4P51532 1647 aa30.91■■■□□ 2.54
EPHB6-205ENST00000486511 RSF1Q96T23 1441 aaPredicted RBP30.8■■■□□ 2.52
EPHB6-205ENST00000486511 CC2D2AQ9P2K1 1620 aa30.68■■■□□ 2.5
EPHB6-205ENST00000486511 SUPT5HO00267 1087 aaKnown RBP30.64■■■□□ 2.5
EPHB6-205ENST00000486511 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
EPHB6-205ENST00000486511 WIZO95785 1651 aa30.63■■■□□ 2.49
EPHB6-205ENST00000486511 ATAD2BQ9ULI0 1458 aa30.58■■■□□ 2.49
EPHB6-205ENST00000486511 PEG3Q9GZU2 1588 aa30.55■■■□□ 2.48
EPHB6-205ENST00000486511 SMARCA2P51531 1590 aa30.5■■■□□ 2.47
EPHB6-205ENST00000486511 NCAPD3P42695 1498 aa30.42■■■□□ 2.46
EPHB6-205ENST00000486511 BAZ1BQ9UIG0 1483 aaKnown RBP30.35■■■□□ 2.45
EPHB6-205ENST00000486511 HMGXB3Q12766 1538 aa30.3■■■□□ 2.44
EPHB6-205ENST00000486511 TOP2AP11388 1531 aaKnown RBP30.25■■■□□ 2.43
EPHB6-205ENST00000486511 CCDC88BA6NC98 1476 aa29.96■■■□□ 2.39
EPHB6-205ENST00000486511 NESP48681 1621 aa29.61■■■□□ 2.33
EPHB6-205ENST00000486511 CADPSQ9ULU8 1353 aa29.6■■■□□ 2.33
EPHB6-205ENST00000486511 CFTRP13569 1480 aa29.57■■■□□ 2.32
EPHB6-205ENST00000486511 LAMC3Q9Y6N6 1575 aa29.48■■■□□ 2.31
EPHB6-205ENST00000486511 PRDM2Q13029 1718 aa29.33■■■□□ 2.29
EPHB6-205ENST00000486511 PDS5BQ9NTI5 1447 aa29.27■■■□□ 2.28
EPHB6-205ENST00000486511 FANCD2Q9BXW9 1451 aa29.27■■■□□ 2.28
EPHB6-205ENST00000486511 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
EPHB6-205ENST00000486511 ABCC8Q09428 1581 aa29.14■■■□□ 2.25
EPHB6-205ENST00000486511 CEP164Q9UPV0 1460 aa29.13■■■□□ 2.25
EPHB6-205ENST00000486511 ERCC6Q03468 1493 aa29.13■■■□□ 2.25
EPHB6-205ENST00000486511 WRNQ14191 1432 aaPredicted RBP eCLIP28.99■■■□□ 2.23
EPHB6-205ENST00000486511 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
EPHB6-205ENST00000486511 URB2Q14146 1524 aaKnown RBP28.96■■■□□ 2.23
EPHB6-205ENST00000486511 CUX1P39880 1505 aa28.95■■■□□ 2.22
EPHB6-205ENST00000486511 MRC2Q9UBG0 1479 aa28.94■■■□□ 2.22
EPHB6-205ENST00000486511 SYNJ1O43426 1573 aa28.93■■■□□ 2.22
EPHB6-205ENST00000486511 THOC2Q8NI27 1593 aaKnown RBP28.91■■■□□ 2.22
EPHB6-205ENST00000486511 TOPBP1Q92547 1522 aa28.88■■■□□ 2.21
EPHB6-205ENST00000486511 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
EPHB6-205ENST00000486511 TOP2BQ02880 1626 aa28.83■■■□□ 2.21
EPHB6-205ENST00000486511 WDR62O43379 1518 aa28.83■■■□□ 2.2
EPHB6-205ENST00000486511 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
EPHB6-205ENST00000486511 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
EPHB6-205ENST00000486511 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
EPHB6-205ENST00000486511 POLA1P09884 1462 aaPredicted RBP28.7■■■□□ 2.18
EPHB6-205ENST00000486511 CUX2O14529 1486 aa28.63■■■□□ 2.17
EPHB6-205ENST00000486511 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
EPHB6-205ENST00000486511 SOGA1O94964 1423 aa28.58■■■□□ 2.17
EPHB6-205ENST00000486511 TARBP1Q13395 1621 aaKnown RBP28.51■■■□□ 2.15
EPHB6-205ENST00000486511 IFT140Q96RY7 1462 aa28.47■■■□□ 2.15
EPHB6-205ENST00000486511 ABCA10Q8WWZ4 1543 aa28.44■■■□□ 2.14
EPHB6-205ENST00000486511 WDR97A6NE52 1622 aa28.42■■■□□ 2.14
EPHB6-205ENST00000486511 RUSC2Q8N2Y8 1516 aa28.41■■■□□ 2.14
EPHB6-205ENST00000486511 ZNF608Q9ULD9 1512 aaPredicted RBP28.41■■■□□ 2.14
EPHB6-205ENST00000486511 TDRD9Q8NDG6 1382 aaKnown RBP28.41■■■□□ 2.14
EPHB6-205ENST00000486511 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.13
EPHB6-205ENST00000486511 FAM9AQ8IZU1 332 aaPredicted RBP28.32■■■□□ 2.12
EPHB6-205ENST00000486511 KIF27Q86VH2 1401 aa28.3■■■□□ 2.12
EPHB6-205ENST00000486511 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
EPHB6-205ENST00000486511 GAPVD1Q14C86 1478 aa28.26■■■□□ 2.11
EPHB6-205ENST00000486511 EIF4G3O43432 1585 aaKnown RBP28.26■■■□□ 2.11
EPHB6-205ENST00000486511 IGF1RP08069 1367 aa28.17■■■□□ 2.1
EPHB6-205ENST00000486511 EEA1Q15075 1411 aa28.15■■■□□ 2.1
EPHB6-205ENST00000486511 CSRNP3Q8WYN3 585 aa28.13■■■□□ 2.09
EPHB6-205ENST00000486511 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
EPHB6-205ENST00000486511 GRIN2BQ13224 1484 aa28.12■■■□□ 2.09
EPHB6-205ENST00000486511 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.09
EPHB6-205ENST00000486511 SNAPC4Q5SXM2 1469 aa28.04■■■□□ 2.08
EPHB6-205ENST00000486511 CARMIL1Q5VZK9 1371 aa27.99■■■□□ 2.07
EPHB6-205ENST00000486511 EHMT2Q96KQ7 1210 aa27.98■■■□□ 2.07
EPHB6-205ENST00000486511 PRXQ9BXM0 1461 aa27.96■■■□□ 2.07
EPHB6-205ENST00000486511 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.07
EPHB6-205ENST00000486511 ADAMTS12P58397 1594 aa27.95■■■□□ 2.06
EPHB6-205ENST00000486511 CUL7Q14999 1698 aa27.94■■■□□ 2.06
EPHB6-205ENST00000486511 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
EPHB6-205ENST00000486511 RAPGEF2Q9Y4G8 1499 aa27.89■■■□□ 2.06
EPHB6-205ENST00000486511 FBLN2P98095 1184 aa27.87■■■□□ 2.05
EPHB6-205ENST00000486511 LOC105371045A0A1W2PR82 267 aa27.87■■■□□ 2.05
EPHB6-205ENST00000486511 SYNJ2O15056 1496 aa27.86■■■□□ 2.05
EPHB6-205ENST00000486511 KIF21BO75037 1637 aa27.86■■■□□ 2.05
EPHB6-205ENST00000486511 CHMP7Q8WUX9 453 aaPredicted RBP27.85■■■□□ 2.05
EPHB6-205ENST00000486511 GRIN2AQ12879 1464 aa27.79■■■□□ 2.04
EPHB6-205ENST00000486511 CHD1O14646 1710 aa27.78■■■□□ 2.04
EPHB6-205ENST00000486511 GOLGA3Q08378 1498 aa27.76■■■□□ 2.04
EPHB6-205ENST00000486511 UBTFP17480 764 aaKnown RBP27.71■■■□□ 2.03
EPHB6-205ENST00000486511 CEP170Q5SW79 1584 aa27.65■■■□□ 2.02
EPHB6-205ENST00000486511 NUP160Q12769 1436 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms