RNA–Protein interactions for RNA: ENST00000486401.1

LRRC23-214, Transcript of leucine rich repeat containing 23, humanhuman

TSL 1 (best)

Gene LRRC23, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-214ENST00000486401 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
LRRC23-214ENST00000486401 CCDC180Q9P1Z9 1646 aa14.65□□□□□ -0.06
LRRC23-214ENST00000486401 ZCCHC6Q5VYS8 1495 aaKnown RBP14.04□□□□□ -0.16
LRRC23-214ENST00000486401 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
LRRC23-214ENST00000486401 AEBP2Q6ZN18 517 aaPredicted RBP13.79□□□□□ -0.2
LRRC23-214ENST00000486401 ABCC9O60706 1549 aa13.78□□□□□ -0.2
LRRC23-214ENST00000486401 MYO15BQ96JP2 1530 aa13.7□□□□□ -0.22
LRRC23-214ENST00000486401 DCAF8L2P0C7V8 631 aa13.65□□□□□ -0.22
LRRC23-214ENST00000486401 NACADO15069 1562 aa13.61□□□□□ -0.23
LRRC23-214ENST00000486401 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
LRRC23-214ENST00000486401 SHROOM4Q9ULL8 1493 aa13.49□□□□□ -0.25
LRRC23-214ENST00000486401 SCRIBQ14160 1630 aa13.39□□□□□ -0.27
LRRC23-214ENST00000486401 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.29
LRRC23-214ENST00000486401 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
LRRC23-214ENST00000486401 CECR2Q9BXF3 1484 aa12.96□□□□□ -0.34
LRRC23-214ENST00000486401 SUPT5HO00267 1087 aaKnown RBP12.94□□□□□ -0.34
LRRC23-214ENST00000486401 PABPN1Q86U42 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
LRRC23-214ENST00000486401 RSF1Q96T23 1441 aaPredicted RBP12.91□□□□□ -0.34
LRRC23-214ENST00000486401 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.34
LRRC23-214ENST00000486401 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.35
LRRC23-214ENST00000486401 SMARCA4P51532 1647 aa12.87□□□□□ -0.35
LRRC23-214ENST00000486401 CHIC1Q5VXU3 224 aa12.86□□□□□ -0.35
LRRC23-214ENST00000486401 WIZO95785 1651 aa12.8□□□□□ -0.36
LRRC23-214ENST00000486401 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
LRRC23-214ENST00000486401 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
LRRC23-214ENST00000486401 TOP2AP11388 1531 aaKnown RBP12.68□□□□□ -0.38
LRRC23-214ENST00000486401 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
LRRC23-214ENST00000486401 ATAD2BQ9ULI0 1458 aa12.63□□□□□ -0.39
LRRC23-214ENST00000486401 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
LRRC23-214ENST00000486401 HMGXB3Q12766 1538 aa12.55□□□□□ -0.4
LRRC23-214ENST00000486401 NCAPD3P42695 1498 aa12.53□□□□□ -0.4
LRRC23-214ENST00000486401 CCDC88BA6NC98 1476 aa12.51□□□□□ -0.41
LRRC23-214ENST00000486401 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
LRRC23-214ENST00000486401 PRDM2Q13029 1718 aa12.26□□□□□ -0.45
LRRC23-214ENST00000486401 CFTRP13569 1480 aa12.24□□□□□ -0.45
LRRC23-214ENST00000486401 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
LRRC23-214ENST00000486401 TRIM41Q8WV44 630 aa12.19□□□□□ -0.46
LRRC23-214ENST00000486401 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
LRRC23-214ENST00000486401 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
LRRC23-214ENST00000486401 WRNQ14191 1432 aaPredicted RBP eCLIP12.15□□□□□ -0.46
LRRC23-214ENST00000486401 SYNJ1O43426 1573 aa12.14□□□□□ -0.47
LRRC23-214ENST00000486401 LAMC3Q9Y6N6 1575 aa12.13□□□□□ -0.47
LRRC23-214ENST00000486401 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
LRRC23-214ENST00000486401 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
LRRC23-214ENST00000486401 NESP48681 1621 aa12.1□□□□□ -0.47
LRRC23-214ENST00000486401 CUX1P39880 1505 aa12.06□□□□□ -0.48
LRRC23-214ENST00000486401 FANCD2Q9BXW9 1451 aa12.06□□□□□ -0.48
LRRC23-214ENST00000486401 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
LRRC23-214ENST00000486401 CEP164Q9UPV0 1460 aa12□□□□□ -0.49
LRRC23-214ENST00000486401 PDS5BQ9NTI5 1447 aa11.99□□□□□ -0.49
LRRC23-214ENST00000486401 DNMBPQ6XZF7 1577 aa11.98□□□□□ -0.49
LRRC23-214ENST00000486401 SOGA1O94964 1423 aa11.97□□□□□ -0.49
LRRC23-214ENST00000486401 EEA1Q15075 1411 aa11.97□□□□□ -0.49
LRRC23-214ENST00000486401 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
LRRC23-214ENST00000486401 FAM9AQ8IZU1 332 aaPredicted RBP11.94□□□□□ -0.5
LRRC23-214ENST00000486401 RUSC2Q8N2Y8 1516 aa11.94□□□□□ -0.5
LRRC23-214ENST00000486401 URB2Q14146 1524 aaKnown RBP11.93□□□□□ -0.5
LRRC23-214ENST00000486401 FGD5Q6ZNL6 1462 aa11.93□□□□□ -0.5
LRRC23-214ENST00000486401 LOC105371045A0A1W2PR82 267 aa11.9□□□□□ -0.5
LRRC23-214ENST00000486401 POLA1P09884 1462 aaPredicted RBP11.88□□□□□ -0.51
LRRC23-214ENST00000486401 MRC2Q9UBG0 1479 aa11.88□□□□□ -0.51
LRRC23-214ENST00000486401 WDR97A6NE52 1622 aa11.86□□□□□ -0.51
LRRC23-214ENST00000486401 KIF21BO75037 1637 aa11.86□□□□□ -0.51
LRRC23-214ENST00000486401 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
LRRC23-214ENST00000486401 KIF27Q86VH2 1401 aa11.85□□□□□ -0.51
LRRC23-214ENST00000486401 WDR62O43379 1518 aa11.84□□□□□ -0.51
LRRC23-214ENST00000486401 ABCA10Q8WWZ4 1543 aa11.83□□□□□ -0.52
LRRC23-214ENST00000486401 THOC2Q8NI27 1593 aaKnown RBP11.83□□□□□ -0.52
LRRC23-214ENST00000486401 CUX2O14529 1486 aa11.83□□□□□ -0.52
LRRC23-214ENST00000486401 RAD54L2Q9Y4B4 1467 aa11.82□□□□□ -0.52
LRRC23-214ENST00000486401 SENP3Q9H4L4 574 aaPredicted RBP11.81□□□□□ -0.52
LRRC23-214ENST00000486401 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
LRRC23-214ENST00000486401 TARBP1Q13395 1621 aaKnown RBP11.8□□□□□ -0.52
LRRC23-214ENST00000486401 GOLGA3Q08378 1498 aa11.8□□□□□ -0.52
LRRC23-214ENST00000486401 PRXQ9BXM0 1461 aa11.78□□□□□ -0.52
LRRC23-214ENST00000486401 ERICH3Q5RHP9 1530 aa11.78□□□□□ -0.52
LRRC23-214ENST00000486401 ABCA5Q8WWZ7 1642 aa11.78□□□□□ -0.52
LRRC23-214ENST00000486401 RAPGEF2Q9Y4G8 1499 aa11.75□□□□□ -0.53
LRRC23-214ENST00000486401 EHMT2Q96KQ7 1210 aa11.74□□□□□ -0.53
LRRC23-214ENST00000486401 TNIKQ9UKE5 1360 aa11.74□□□□□ -0.53
LRRC23-214ENST00000486401 IGF1RP08069 1367 aa11.73□□□□□ -0.53
LRRC23-214ENST00000486401 IFT140Q96RY7 1462 aa11.72□□□□□ -0.53
LRRC23-214ENST00000486401 CUL7Q14999 1698 aa11.71□□□□□ -0.53
LRRC23-214ENST00000486401 PBRM1Q86U86 1689 aa11.69□□□□□ -0.54
LRRC23-214ENST00000486401 GAPVD1Q14C86 1478 aa11.69□□□□□ -0.54
LRRC23-214ENST00000486401 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
LRRC23-214ENST00000486401 CEP162Q5TB80 1403 aa11.67□□□□□ -0.54
LRRC23-214ENST00000486401 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
LRRC23-214ENST00000486401 UBTFP17480 764 aaKnown RBP11.66□□□□□ -0.54
LRRC23-214ENST00000486401 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
LRRC23-214ENST00000486401 ZNF608Q9ULD9 1512 aaPredicted RBP11.64□□□□□ -0.55
LRRC23-214ENST00000486401 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.55
LRRC23-214ENST00000486401 GRIN2BQ13224 1484 aa11.62□□□□□ -0.55
LRRC23-214ENST00000486401 ADAMTS12P58397 1594 aa11.62□□□□□ -0.55
LRRC23-214ENST00000486401 CTTNBP2Q8WZ74 1663 aa11.6□□□□□ -0.55
LRRC23-214ENST00000486401 CLIP1P30622 1438 aa11.59□□□□□ -0.55
LRRC23-214ENST00000486401 PHF23Q9BUL5 403 aaPredicted RBP11.58□□□□□ -0.56
LRRC23-214ENST00000486401 FHAD1B1AJZ9 1412 aa11.57□□□□□ -0.56
LRRC23-214ENST00000486401 SNAPC4Q5SXM2 1469 aa11.54□□□□□ -0.56
LRRC23-214ENST00000486401 MAGI1Q96QZ7 1491 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms