RNA–Protein interactions for RNA: ENST00000486390.1

NECAP2-205, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 572 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-205ENST00000486390 NISCHQ9Y2I1 1504 aa36.15■■■■□ 3.38
NECAP2-205ENST00000486390 CCDC180Q9P1Z9 1646 aa32.24■■■□□ 2.75
NECAP2-205ENST00000486390 ABCC9O60706 1549 aa32.17■■■□□ 2.74
NECAP2-205ENST00000486390 DCAF8L2P0C7V8 631 aa30.88■■■□□ 2.53
NECAP2-205ENST00000486390 RB1CC1Q8TDY2 1594 aa30.69■■■□□ 2.5
NECAP2-205ENST00000486390 NACADO15069 1562 aa30.49■■■□□ 2.47
NECAP2-205ENST00000486390 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.41
NECAP2-205ENST00000486390 MYO15BQ96JP2 1530 aa30.04■■■□□ 2.4
NECAP2-205ENST00000486390 ZCCHC6Q5VYS8 1495 aaKnown RBP29.96■■■□□ 2.39
NECAP2-205ENST00000486390 DNAJC5BQ9UF47 199 aa29.81■■■□□ 2.36
NECAP2-205ENST00000486390 UNC13AQ9UPW8 1703 aa29.81■■■□□ 2.36
NECAP2-205ENST00000486390 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
NECAP2-205ENST00000486390 BICRAQ9NZM4 1560 aa29.6■■■□□ 2.33
NECAP2-205ENST00000486390 SCRIBQ14160 1630 aa29.55■■■□□ 2.32
NECAP2-205ENST00000486390 SHROOM4Q9ULL8 1493 aa29.28■■■□□ 2.28
NECAP2-205ENST00000486390 CC2D2AQ9P2K1 1620 aa28.97■■■□□ 2.23
NECAP2-205ENST00000486390 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
NECAP2-205ENST00000486390 CECR2Q9BXF3 1484 aa28.92■■■□□ 2.22
NECAP2-205ENST00000486390 NCAPD3P42695 1498 aa28.13■■■□□ 2.09
NECAP2-205ENST00000486390 SMARCA4P51532 1647 aa28.12■■■□□ 2.09
NECAP2-205ENST00000486390 ATAD2BQ9ULI0 1458 aa28.1■■■□□ 2.09
NECAP2-205ENST00000486390 SMARCA2P51531 1590 aa28.09■■■□□ 2.09
NECAP2-205ENST00000486390 BAZ1AQ9NRL2 1556 aaPredicted RBP28.09■■■□□ 2.09
NECAP2-205ENST00000486390 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
NECAP2-205ENST00000486390 HMGXB3Q12766 1538 aa27.92■■■□□ 2.06
NECAP2-205ENST00000486390 ERCC6Q03468 1493 aa27.87■■■□□ 2.05
NECAP2-205ENST00000486390 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
NECAP2-205ENST00000486390 PEG3Q9GZU2 1588 aa27.74■■■□□ 2.03
NECAP2-205ENST00000486390 NESP48681 1621 aa27.64■■■□□ 2.02
NECAP2-205ENST00000486390 WIZO95785 1651 aa27.56■■■□□ 2
NECAP2-205ENST00000486390 CUX2O14529 1486 aa27.52■■■□□ 2
NECAP2-205ENST00000486390 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
NECAP2-205ENST00000486390 PDS5BQ9NTI5 1447 aa27.43■■□□□ 1.98
NECAP2-205ENST00000486390 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
NECAP2-205ENST00000486390 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
NECAP2-205ENST00000486390 DNAJC5Q9H3Z4 198 aa27.25■■□□□ 1.95
NECAP2-205ENST00000486390 KIF21AQ7Z4S6 1674 aa27.24■■□□□ 1.95
NECAP2-205ENST00000486390 TOP2AP11388 1531 aaKnown RBP27.22■■□□□ 1.95
NECAP2-205ENST00000486390 THOC2Q8NI27 1593 aaKnown RBP27.18■■□□□ 1.94
NECAP2-205ENST00000486390 MRC2Q9UBG0 1479 aa27.1■■□□□ 1.93
NECAP2-205ENST00000486390 CEP164Q9UPV0 1460 aa27.1■■□□□ 1.93
NECAP2-205ENST00000486390 FANCD2Q9BXW9 1451 aa27.07■■□□□ 1.92
NECAP2-205ENST00000486390 CFTRP13569 1480 aa27.05■■□□□ 1.92
NECAP2-205ENST00000486390 CCDC88BA6NC98 1476 aa26.95■■□□□ 1.91
NECAP2-205ENST00000486390 WDR62O43379 1518 aa26.92■■□□□ 1.9
NECAP2-205ENST00000486390 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
NECAP2-205ENST00000486390 URB2Q14146 1524 aaKnown RBP26.74■■□□□ 1.87
NECAP2-205ENST00000486390 PRDM2Q13029 1718 aa26.73■■□□□ 1.87
NECAP2-205ENST00000486390 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
NECAP2-205ENST00000486390 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
NECAP2-205ENST00000486390 OSCARQ8IYS5 282 aa26.52■■□□□ 1.84
NECAP2-205ENST00000486390 IFT140Q96RY7 1462 aa26.52■■□□□ 1.84
NECAP2-205ENST00000486390 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
NECAP2-205ENST00000486390 TRIM41Q8WV44 630 aa26.43■■□□□ 1.82
NECAP2-205ENST00000486390 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.82
NECAP2-205ENST00000486390 FBLN2P98095 1184 aa26.33■■□□□ 1.81
NECAP2-205ENST00000486390 SOGA1O94964 1423 aa26.3■■□□□ 1.8
NECAP2-205ENST00000486390 AQRO60306 1485 aaKnown RBP eCLIP26.28■■□□□ 1.82e-6■□□□□ 11
NECAP2-205ENST00000486390 POLA1P09884 1462 aaPredicted RBP26.28■■□□□ 1.8
NECAP2-205ENST00000486390 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
NECAP2-205ENST00000486390 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
NECAP2-205ENST00000486390 TDRD9Q8NDG6 1382 aaKnown RBP26.21■■□□□ 1.79
NECAP2-205ENST00000486390 FGD5Q6ZNL6 1462 aa26.2■■□□□ 1.78
NECAP2-205ENST00000486390 TARBP1Q13395 1621 aaKnown RBP26.19■■□□□ 1.78
NECAP2-205ENST00000486390 CUX1P39880 1505 aa26.15■■□□□ 1.78
NECAP2-205ENST00000486390 CHMP7Q8WUX9 453 aaPredicted RBP26.1■■□□□ 1.77
NECAP2-205ENST00000486390 CHD1O14646 1710 aa26■■□□□ 1.75
NECAP2-205ENST00000486390 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
NECAP2-205ENST00000486390 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
NECAP2-205ENST00000486390 WDR97A6NE52 1622 aa25.97■■□□□ 1.75
NECAP2-205ENST00000486390 WRNQ14191 1432 aaPredicted RBP eCLIP25.96■■□□□ 1.75
NECAP2-205ENST00000486390 GAPVD1Q14C86 1478 aa25.94■■□□□ 1.74
NECAP2-205ENST00000486390 CYB5RLQ6IPT4 315 aa25.93■■□□□ 1.74
NECAP2-205ENST00000486390 RIMBP3CA6NJZ7 1639 aa25.92■■□□□ 1.74
NECAP2-205ENST00000486390 RIMBP3BA6NNM3 1639 aa25.92■■□□□ 1.74
NECAP2-205ENST00000486390 RIMBP3Q9UFD9 1639 aa25.92■■□□□ 1.74
NECAP2-205ENST00000486390 MAGI1Q96QZ7 1491 aaPredicted RBP25.91■■□□□ 1.74
NECAP2-205ENST00000486390 ARHGEF11O15085 1522 aa25.9■■□□□ 1.74
NECAP2-205ENST00000486390 ABCA10Q8WWZ4 1543 aa25.86■■□□□ 1.73
NECAP2-205ENST00000486390 SYNJ2O15056 1496 aa25.84■■□□□ 1.73
NECAP2-205ENST00000486390 TOP2BQ02880 1626 aa25.82■■□□□ 1.72
NECAP2-205ENST00000486390 SYNJ1O43426 1573 aa25.81■■□□□ 1.72
NECAP2-205ENST00000486390 PBRM1Q86U86 1689 aa25.8■■□□□ 1.72
NECAP2-205ENST00000486390 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
NECAP2-205ENST00000486390 ABCA5Q8WWZ7 1642 aa25.73■■□□□ 1.71
NECAP2-205ENST00000486390 TRHP20396 242 aaPredicted RBP25.68■■□□□ 1.7
NECAP2-205ENST00000486390 CLASP1Q7Z460 1538 aa25.63■■□□□ 1.69
NECAP2-205ENST00000486390 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
NECAP2-205ENST00000486390 FHAD1B1AJZ9 1412 aa25.61■■□□□ 1.69
NECAP2-205ENST00000486390 GRIN2AQ12879 1464 aa25.6■■□□□ 1.69
NECAP2-205ENST00000486390 ERICH3Q5RHP9 1530 aa25.56■■□□□ 1.68
NECAP2-205ENST00000486390 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
NECAP2-205ENST00000486390 KIF27Q86VH2 1401 aa25.48■■□□□ 1.67
NECAP2-205ENST00000486390 NUP160Q12769 1436 aa25.44■■□□□ 1.66
NECAP2-205ENST00000486390 CEP170Q5SW79 1584 aa25.44■■□□□ 1.66
NECAP2-205ENST00000486390 JPH4Q96JJ6 628 aa25.39■■□□□ 1.66
NECAP2-205ENST00000486390 IGF1RP08069 1367 aa25.35■■□□□ 1.65
NECAP2-205ENST00000486390 PRG4Q92954 1404 aaPredicted RBP25.33■■□□□ 1.65
NECAP2-205ENST00000486390 ERCC6L2Q5T890 1561 aa25.29■■□□□ 1.64
NECAP2-205ENST00000486390 CARMIL1Q5VZK9 1371 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 442.5 ms