RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 NISCHQ9Y2I1 1504 aa26.86■■□□□ 1.89
SNX21-211ENST00000486336 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
SNX21-211ENST00000486336 ABCC9O60706 1549 aa23.69■■□□□ 1.38
SNX21-211ENST00000486336 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
SNX21-211ENST00000486336 RB1CC1Q8TDY2 1594 aa22.63■■□□□ 1.21
SNX21-211ENST00000486336 NACADO15069 1562 aa22.55■■□□□ 1.2
SNX21-211ENST00000486336 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
SNX21-211ENST00000486336 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
SNX21-211ENST00000486336 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
SNX21-211ENST00000486336 DCAF1Q9Y4B6 1507 aa22.14■■□□□ 1.13
SNX21-211ENST00000486336 UNC13AQ9UPW8 1703 aa22.09■■□□□ 1.13
SNX21-211ENST00000486336 BICRAQ9NZM4 1560 aa21.93■■□□□ 1.1
SNX21-211ENST00000486336 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
SNX21-211ENST00000486336 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
SNX21-211ENST00000486336 SHROOM4Q9ULL8 1493 aa21.62■■□□□ 1.05
SNX21-211ENST00000486336 EIF4G1Q04637 1599 aaKnown RBP21.39■■□□□ 1.01
SNX21-211ENST00000486336 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
SNX21-211ENST00000486336 CECR2Q9BXF3 1484 aa21.28■■□□□ 1
SNX21-211ENST00000486336 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
SNX21-211ENST00000486336 ATAD2BQ9ULI0 1458 aa20.82■□□□□ 0.92
SNX21-211ENST00000486336 BAZ1AQ9NRL2 1556 aaPredicted RBP20.82■□□□□ 0.92
SNX21-211ENST00000486336 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
SNX21-211ENST00000486336 SMARCA2P51531 1590 aa20.77■□□□□ 0.92
SNX21-211ENST00000486336 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
SNX21-211ENST00000486336 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
SNX21-211ENST00000486336 HMGXB3Q12766 1538 aa20.67■□□□□ 0.9
SNX21-211ENST00000486336 PEG3Q9GZU2 1588 aa20.6■□□□□ 0.89
SNX21-211ENST00000486336 WIZO95785 1651 aa20.5■□□□□ 0.87
SNX21-211ENST00000486336 ERCC6Q03468 1493 aa20.45■□□□□ 0.86
SNX21-211ENST00000486336 NESP48681 1621 aa20.44■□□□□ 0.86
SNX21-211ENST00000486336 RSF1Q96T23 1441 aaPredicted RBP20.43■□□□□ 0.86
SNX21-211ENST00000486336 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
SNX21-211ENST00000486336 CADPSQ9ULU8 1353 aa20.25■□□□□ 0.83
SNX21-211ENST00000486336 TOP2AP11388 1531 aaKnown RBP20.23■□□□□ 0.83
SNX21-211ENST00000486336 PDS5BQ9NTI5 1447 aa20.22■□□□□ 0.83
SNX21-211ENST00000486336 CUX2O14529 1486 aa20.21■□□□□ 0.83
SNX21-211ENST00000486336 KIF21AQ7Z4S6 1674 aa20.14■□□□□ 0.81
SNX21-211ENST00000486336 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.8
SNX21-211ENST00000486336 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
SNX21-211ENST00000486336 CFTRP13569 1480 aa20.05■□□□□ 0.8
SNX21-211ENST00000486336 FANCD2Q9BXW9 1451 aa20.02■□□□□ 0.8
SNX21-211ENST00000486336 MRC2Q9UBG0 1479 aa20■□□□□ 0.79
SNX21-211ENST00000486336 CEP164Q9UPV0 1460 aa20■□□□□ 0.79
SNX21-211ENST00000486336 SUPT5HO00267 1087 aaKnown RBP19.95■□□□□ 0.78
SNX21-211ENST00000486336 WDR62O43379 1518 aa19.89■□□□□ 0.77
SNX21-211ENST00000486336 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
SNX21-211ENST00000486336 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
SNX21-211ENST00000486336 URB2Q14146 1524 aaKnown RBP19.81■□□□□ 0.76
SNX21-211ENST00000486336 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
SNX21-211ENST00000486336 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
SNX21-211ENST00000486336 DNMBPQ6XZF7 1577 aa19.6■□□□□ 0.73
SNX21-211ENST00000486336 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
SNX21-211ENST00000486336 ZNF608Q9ULD9 1512 aaPredicted RBP19.53■□□□□ 0.72
SNX21-211ENST00000486336 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
SNX21-211ENST00000486336 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
SNX21-211ENST00000486336 SOGA1O94964 1423 aa19.45■□□□□ 0.7
SNX21-211ENST00000486336 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
SNX21-211ENST00000486336 CUX1P39880 1505 aa19.45■□□□□ 0.7
SNX21-211ENST00000486336 AQRO60306 1485 aaKnown RBP eCLIP19.43■□□□□ 0.7
SNX21-211ENST00000486336 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
SNX21-211ENST00000486336 TARBP1Q13395 1621 aaKnown RBP19.42■□□□□ 0.7
SNX21-211ENST00000486336 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
SNX21-211ENST00000486336 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.69
SNX21-211ENST00000486336 FBLN2P98095 1184 aa19.35■□□□□ 0.69
SNX21-211ENST00000486336 WRNQ14191 1432 aaPredicted RBP eCLIP19.28■□□□□ 0.68
SNX21-211ENST00000486336 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
SNX21-211ENST00000486336 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
SNX21-211ENST00000486336 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
SNX21-211ENST00000486336 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
SNX21-211ENST00000486336 WDR97A6NE52 1622 aa19.21■□□□□ 0.67
SNX21-211ENST00000486336 GRIN2BQ13224 1484 aa19.21■□□□□ 0.67
SNX21-211ENST00000486336 CHD1O14646 1710 aa19.2■□□□□ 0.66
SNX21-211ENST00000486336 TOP2BQ02880 1626 aa19.2■□□□□ 0.66
SNX21-211ENST00000486336 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
SNX21-211ENST00000486336 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
SNX21-211ENST00000486336 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
SNX21-211ENST00000486336 MAGI1Q96QZ7 1491 aaPredicted RBP19.15■□□□□ 0.66
SNX21-211ENST00000486336 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
SNX21-211ENST00000486336 ABCA5Q8WWZ7 1642 aa19.1■□□□□ 0.65
SNX21-211ENST00000486336 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
SNX21-211ENST00000486336 RIMBP3CA6NJZ7 1639 aa19.07■□□□□ 0.64
SNX21-211ENST00000486336 RIMBP3BA6NNM3 1639 aa19.07■□□□□ 0.64
SNX21-211ENST00000486336 RIMBP3Q9UFD9 1639 aa19.07■□□□□ 0.64
SNX21-211ENST00000486336 ARHGEF11O15085 1522 aa19.05■□□□□ 0.64
SNX21-211ENST00000486336 CYB5RLQ6IPT4 315 aa19.01■□□□□ 0.63
SNX21-211ENST00000486336 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
SNX21-211ENST00000486336 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
SNX21-211ENST00000486336 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
SNX21-211ENST00000486336 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
SNX21-211ENST00000486336 GRIN2AQ12879 1464 aa18.94■□□□□ 0.62
SNX21-211ENST00000486336 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
SNX21-211ENST00000486336 ARAP1Q96P48 1450 aa18.89■□□□□ 0.61
SNX21-211ENST00000486336 IGF1RP08069 1367 aa18.85■□□□□ 0.61
SNX21-211ENST00000486336 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
SNX21-211ENST00000486336 NUP160Q12769 1436 aa18.84■□□□□ 0.61
SNX21-211ENST00000486336 JPH4Q96JJ6 628 aa18.76■□□□□ 0.59
SNX21-211ENST00000486336 CARMIL1Q5VZK9 1371 aa18.76■□□□□ 0.59
SNX21-211ENST00000486336 CUL7Q14999 1698 aa18.74■□□□□ 0.59
SNX21-211ENST00000486336 ERCC6L2Q5T890 1561 aa18.74■□□□□ 0.59
SNX21-211ENST00000486336 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms