RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 NISCHQ9Y2I1 1504 aa30.58■■■□□ 2.49
VTI1BP1-201ENST00000486325 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
VTI1BP1-201ENST00000486325 ABCC9O60706 1549 aa25.6■■□□□ 1.69
VTI1BP1-201ENST00000486325 ZCCHC6Q5VYS8 1495 aaKnown RBP25.59■■□□□ 1.69
VTI1BP1-201ENST00000486325 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
VTI1BP1-201ENST00000486325 DCAF1Q9Y4B6 1507 aa25.36■■□□□ 1.65
VTI1BP1-201ENST00000486325 MYO15BQ96JP2 1530 aa25.22■■□□□ 1.63
VTI1BP1-201ENST00000486325 NACADO15069 1562 aa25.12■■□□□ 1.61
VTI1BP1-201ENST00000486325 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
VTI1BP1-201ENST00000486325 SHROOM4Q9ULL8 1493 aa24.6■■□□□ 1.53
VTI1BP1-201ENST00000486325 SCRIBQ14160 1630 aa24.51■■□□□ 1.51
VTI1BP1-201ENST00000486325 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
VTI1BP1-201ENST00000486325 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
VTI1BP1-201ENST00000486325 BICRAQ9NZM4 1560 aa24.1■■□□□ 1.45
VTI1BP1-201ENST00000486325 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
VTI1BP1-201ENST00000486325 BAZ1AQ9NRL2 1556 aaPredicted RBP23.66■■□□□ 1.38
VTI1BP1-201ENST00000486325 SUPT5HO00267 1087 aaKnown RBP23.61■■□□□ 1.37
VTI1BP1-201ENST00000486325 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
VTI1BP1-201ENST00000486325 MROH2BQ7Z745 1585 aa23.55■■□□□ 1.36
VTI1BP1-201ENST00000486325 SMARCA4P51532 1647 aa23.53■■□□□ 1.36
VTI1BP1-201ENST00000486325 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
VTI1BP1-201ENST00000486325 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
VTI1BP1-201ENST00000486325 WIZO95785 1651 aa23.31■■□□□ 1.32
VTI1BP1-201ENST00000486325 SMARCA2P51531 1590 aa23.3■■□□□ 1.32
VTI1BP1-201ENST00000486325 ATAD2BQ9ULI0 1458 aa23.28■■□□□ 1.32
VTI1BP1-201ENST00000486325 NCAPD3P42695 1498 aa23.19■■□□□ 1.3
VTI1BP1-201ENST00000486325 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
VTI1BP1-201ENST00000486325 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
VTI1BP1-201ENST00000486325 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
VTI1BP1-201ENST00000486325 HMGXB3Q12766 1538 aa23.08■■□□□ 1.29
VTI1BP1-201ENST00000486325 CCDC88BA6NC98 1476 aa22.9■■□□□ 1.26
VTI1BP1-201ENST00000486325 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.25
VTI1BP1-201ENST00000486325 CADPSQ9ULU8 1353 aa22.58■■□□□ 1.21
VTI1BP1-201ENST00000486325 CFTRP13569 1480 aa22.55■■□□□ 1.2
VTI1BP1-201ENST00000486325 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
VTI1BP1-201ENST00000486325 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
VTI1BP1-201ENST00000486325 NESP48681 1621 aa22.34■■□□□ 1.17
VTI1BP1-201ENST00000486325 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
VTI1BP1-201ENST00000486325 PRDM2Q13029 1718 aa22.33■■□□□ 1.17
VTI1BP1-201ENST00000486325 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
VTI1BP1-201ENST00000486325 FANCD2Q9BXW9 1451 aa22.27■■□□□ 1.16
VTI1BP1-201ENST00000486325 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
VTI1BP1-201ENST00000486325 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
VTI1BP1-201ENST00000486325 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
VTI1BP1-201ENST00000486325 TOP2BQ02880 1626 aa22.06■■□□□ 1.12
VTI1BP1-201ENST00000486325 ERCC6Q03468 1493 aa22.05■■□□□ 1.12
VTI1BP1-201ENST00000486325 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
VTI1BP1-201ENST00000486325 CUX1P39880 1505 aa22.04■■□□□ 1.12
VTI1BP1-201ENST00000486325 KIF21AQ7Z4S6 1674 aa22.04■■□□□ 1.12
VTI1BP1-201ENST00000486325 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.11
VTI1BP1-201ENST00000486325 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
VTI1BP1-201ENST00000486325 MRC2Q9UBG0 1479 aa21.98■■□□□ 1.11
VTI1BP1-201ENST00000486325 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
VTI1BP1-201ENST00000486325 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
VTI1BP1-201ENST00000486325 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
VTI1BP1-201ENST00000486325 WDR62O43379 1518 aa21.85■■□□□ 1.09
VTI1BP1-201ENST00000486325 POLA1P09884 1462 aaPredicted RBP21.83■■□□□ 1.09
VTI1BP1-201ENST00000486325 SOGA1O94964 1423 aa21.83■■□□□ 1.09
VTI1BP1-201ENST00000486325 EEA1Q15075 1411 aa21.83■■□□□ 1.09
VTI1BP1-201ENST00000486325 THOC2Q8NI27 1593 aaKnown RBP21.79■■□□□ 1.08
VTI1BP1-201ENST00000486325 FAM9AQ8IZU1 332 aaPredicted RBP21.78■■□□□ 1.08
VTI1BP1-201ENST00000486325 KIF27Q86VH2 1401 aa21.75■■□□□ 1.07
VTI1BP1-201ENST00000486325 CSRNP3Q8WYN3 585 aa21.74■■□□□ 1.07
VTI1BP1-201ENST00000486325 RAD54L2Q9Y4B4 1467 aa21.73■■□□□ 1.07
VTI1BP1-201ENST00000486325 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
VTI1BP1-201ENST00000486325 CUX2O14529 1486 aa21.71■■□□□ 1.07
VTI1BP1-201ENST00000486325 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
VTI1BP1-201ENST00000486325 RUSC2Q8N2Y8 1516 aa21.68■■□□□ 1.06
VTI1BP1-201ENST00000486325 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.05
VTI1BP1-201ENST00000486325 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
VTI1BP1-201ENST00000486325 IGF1RP08069 1367 aa21.59■■□□□ 1.05
VTI1BP1-201ENST00000486325 WDR97A6NE52 1622 aa21.57■■□□□ 1.04
VTI1BP1-201ENST00000486325 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
VTI1BP1-201ENST00000486325 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
VTI1BP1-201ENST00000486325 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
VTI1BP1-201ENST00000486325 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.03
VTI1BP1-201ENST00000486325 ERICH3Q5RHP9 1530 aa21.49■■□□□ 1.03
VTI1BP1-201ENST00000486325 ZNF608Q9ULD9 1512 aaPredicted RBP21.48■■□□□ 1.03
VTI1BP1-201ENST00000486325 CARMIL1Q5VZK9 1371 aa21.48■■□□□ 1.03
VTI1BP1-201ENST00000486325 PRXQ9BXM0 1461 aa21.47■■□□□ 1.03
VTI1BP1-201ENST00000486325 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
VTI1BP1-201ENST00000486325 KIF21BO75037 1637 aa21.44■■□□□ 1.02
VTI1BP1-201ENST00000486325 GOLGA3Q08378 1498 aa21.43■■□□□ 1.02
VTI1BP1-201ENST00000486325 UBTFP17480 764 aaKnown RBP21.41■■□□□ 1.02
VTI1BP1-201ENST00000486325 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
VTI1BP1-201ENST00000486325 RAPGEF2Q9Y4G8 1499 aa21.39■■□□□ 1.02
VTI1BP1-201ENST00000486325 CUL7Q14999 1698 aa21.39■■□□□ 1.01
VTI1BP1-201ENST00000486325 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
VTI1BP1-201ENST00000486325 FHAD1B1AJZ9 1412 aa21.36■■□□□ 1.01
VTI1BP1-201ENST00000486325 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
VTI1BP1-201ENST00000486325 PBRM1Q86U86 1689 aa21.35■■□□□ 1.01
VTI1BP1-201ENST00000486325 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
VTI1BP1-201ENST00000486325 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
VTI1BP1-201ENST00000486325 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
VTI1BP1-201ENST00000486325 ADAMTS12P58397 1594 aa21.24■□□□□ 0.99
VTI1BP1-201ENST00000486325 SYNJ2O15056 1496 aa21.22■□□□□ 0.99
VTI1BP1-201ENST00000486325 FBLN2P98095 1184 aa21.19■□□□□ 0.98
VTI1BP1-201ENST00000486325 GRIN2AQ12879 1464 aa21.15■□□□□ 0.98
VTI1BP1-201ENST00000486325 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
VTI1BP1-201ENST00000486325 CLIP1P30622 1438 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms