RNA–Protein interactions for RNA: ENST00000485761.1

CD34-204, Transcript of CD34 molecule, humanhuman

TSL 5

Gene CD34, Length 915 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD34-204ENST00000485761 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
CD34-204ENST00000485761 ABCC9O60706 1549 aa30.46■■■□□ 2.47
CD34-204ENST00000485761 CCDC180Q9P1Z9 1646 aa30.16■■■□□ 2.42
CD34-204ENST00000485761 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
CD34-204ENST00000485761 ZCCHC6Q5VYS8 1495 aaKnown RBP28.8■■■□□ 2.2
CD34-204ENST00000485761 RB1CC1Q8TDY2 1594 aa28.71■■■□□ 2.19
CD34-204ENST00000485761 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
CD34-204ENST00000485761 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
CD34-204ENST00000485761 NACADO15069 1562 aa28.36■■■□□ 2.13
CD34-204ENST00000485761 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.12
CD34-204ENST00000485761 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
CD34-204ENST00000485761 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.05
CD34-204ENST00000485761 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.04
CD34-204ENST00000485761 BICRAQ9NZM4 1560 aa27.81■■■□□ 2.04
CD34-204ENST00000485761 SCRIBQ14160 1630 aa27.7■■■□□ 2.02
CD34-204ENST00000485761 CECR2Q9BXF3 1484 aa27.51■■□□□ 1.99
CD34-204ENST00000485761 CC2D2AQ9P2K1 1620 aa27.42■■□□□ 1.98
CD34-204ENST00000485761 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
CD34-204ENST00000485761 DNAJC5Q9H3Z4 198 aa27.18■■□□□ 1.94
CD34-204ENST00000485761 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
CD34-204ENST00000485761 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
CD34-204ENST00000485761 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
CD34-204ENST00000485761 RSF1Q96T23 1441 aaPredicted RBP26.51■■□□□ 1.83
CD34-204ENST00000485761 SMARCA4P51532 1647 aa26.5■■□□□ 1.83
CD34-204ENST00000485761 CUX2O14529 1486 aa26.49■■□□□ 1.83
CD34-204ENST00000485761 ERCC6Q03468 1493 aa26.39■■□□□ 1.82
CD34-204ENST00000485761 WIZO95785 1651 aa26.32■■□□□ 1.8
CD34-204ENST00000485761 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
CD34-204ENST00000485761 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
CD34-204ENST00000485761 SMARCA2P51531 1590 aa26.13■■□□□ 1.77
CD34-204ENST00000485761 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
CD34-204ENST00000485761 TOP2AP11388 1531 aaKnown RBP26.04■■□□□ 1.76
CD34-204ENST00000485761 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
CD34-204ENST00000485761 NESP48681 1621 aa25.96■■□□□ 1.75
CD34-204ENST00000485761 HMGXB3Q12766 1538 aa25.93■■□□□ 1.74
CD34-204ENST00000485761 TRIM41Q8WV44 630 aa25.81■■□□□ 1.72
CD34-204ENST00000485761 THOC2Q8NI27 1593 aaKnown RBP25.75■■□□□ 1.71
CD34-204ENST00000485761 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
CD34-204ENST00000485761 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
CD34-204ENST00000485761 PDS5BQ9NTI5 1447 aa25.63■■□□□ 1.69
CD34-204ENST00000485761 KIF21AQ7Z4S6 1674 aa25.53■■□□□ 1.68
CD34-204ENST00000485761 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
CD34-204ENST00000485761 MRC2Q9UBG0 1479 aa25.4■■□□□ 1.66
CD34-204ENST00000485761 WDR62O43379 1518 aa25.31■■□□□ 1.64
CD34-204ENST00000485761 CFTRP13569 1480 aa25.28■■□□□ 1.64
CD34-204ENST00000485761 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
CD34-204ENST00000485761 OSCARQ8IYS5 282 aa25.27■■□□□ 1.64
CD34-204ENST00000485761 PRDM2Q13029 1718 aa25.21■■□□□ 1.63
CD34-204ENST00000485761 CEP164Q9UPV0 1460 aa25.2■■□□□ 1.62
CD34-204ENST00000485761 ABCC8Q09428 1581 aa25.12■■□□□ 1.61
CD34-204ENST00000485761 FANCD2Q9BXW9 1451 aa25.11■■□□□ 1.61
CD34-204ENST00000485761 WRNQ14191 1432 aaPredicted RBP eCLIP24.99■■□□□ 1.59
CD34-204ENST00000485761 SYNJ1O43426 1573 aa24.92■■□□□ 1.58
CD34-204ENST00000485761 URB2Q14146 1524 aaKnown RBP24.9■■□□□ 1.58
CD34-204ENST00000485761 RIMBP3CA6NJZ7 1639 aa24.86■■□□□ 1.57
CD34-204ENST00000485761 RIMBP3BA6NNM3 1639 aa24.86■■□□□ 1.57
CD34-204ENST00000485761 RIMBP3Q9UFD9 1639 aa24.86■■□□□ 1.57
CD34-204ENST00000485761 CUX1P39880 1505 aa24.85■■□□□ 1.57
CD34-204ENST00000485761 TOP2BQ02880 1626 aa24.83■■□□□ 1.57
CD34-204ENST00000485761 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.56
CD34-204ENST00000485761 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
CD34-204ENST00000485761 DNMBPQ6XZF7 1577 aa24.74■■□□□ 1.55
CD34-204ENST00000485761 IFT140Q96RY7 1462 aa24.72■■□□□ 1.55
CD34-204ENST00000485761 CYB5RLQ6IPT4 315 aa24.71■■□□□ 1.55
CD34-204ENST00000485761 TOPBP1Q92547 1522 aa24.7■■□□□ 1.54
CD34-204ENST00000485761 ZNF608Q9ULD9 1512 aaPredicted RBP24.7■■□□□ 1.54
CD34-204ENST00000485761 TRHP20396 242 aaPredicted RBP24.68■■□□□ 1.54
CD34-204ENST00000485761 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
CD34-204ENST00000485761 FAM9AQ8IZU1 332 aaPredicted RBP24.58■■□□□ 1.53
CD34-204ENST00000485761 SOGA1O94964 1423 aa24.56■■□□□ 1.52
CD34-204ENST00000485761 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
CD34-204ENST00000485761 FBLN2P98095 1184 aa24.51■■□□□ 1.51
CD34-204ENST00000485761 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
CD34-204ENST00000485761 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
CD34-204ENST00000485761 EEA1Q15075 1411 aa24.47■■□□□ 1.51
CD34-204ENST00000485761 ARAP1Q96P48 1450 aa24.46■■□□□ 1.51
CD34-204ENST00000485761 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
CD34-204ENST00000485761 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.5
CD34-204ENST00000485761 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
CD34-204ENST00000485761 KIF27Q86VH2 1401 aa24.4■■□□□ 1.5
CD34-204ENST00000485761 ABCA10Q8WWZ4 1543 aa24.39■■□□□ 1.49
CD34-204ENST00000485761 CHD1O14646 1710 aa24.38■■□□□ 1.49
CD34-204ENST00000485761 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
CD34-204ENST00000485761 TARBP1Q13395 1621 aaKnown RBP24.35■■□□□ 1.49
CD34-204ENST00000485761 CSRNP3Q8WYN3 585 aa24.35■■□□□ 1.49
CD34-204ENST00000485761 LOC105371045A0A1W2PR82 267 aa24.29■■□□□ 1.48
CD34-204ENST00000485761 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
CD34-204ENST00000485761 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
CD34-204ENST00000485761 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
CD34-204ENST00000485761 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
CD34-204ENST00000485761 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
CD34-204ENST00000485761 KIF21BO75037 1637 aa24.19■■□□□ 1.46
CD34-204ENST00000485761 IGF1RP08069 1367 aa24.17■■□□□ 1.46
CD34-204ENST00000485761 SNAPC4Q5SXM2 1469 aa24.16■■□□□ 1.46
CD34-204ENST00000485761 GOLGA3Q08378 1498 aa24.13■■□□□ 1.45
CD34-204ENST00000485761 PBRM1Q86U86 1689 aa24.13■■□□□ 1.45
CD34-204ENST00000485761 CLASP1Q7Z460 1538 aa24.13■■□□□ 1.45
CD34-204ENST00000485761 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
CD34-204ENST00000485761 ERICH3Q5RHP9 1530 aa24.11■■□□□ 1.45
CD34-204ENST00000485761 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms