RNA–Protein interactions for RNA: ENST00000485575.1

SEMA4A-214, Transcript of semaphorin 4A, humanhuman

TSL 3

Gene SEMA4A, Length 658 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-214ENST00000485575 NISCHQ9Y2I1 1504 aa49.7■■■■■ 5.55
SEMA4A-214ENST00000485575 CCDC180Q9P1Z9 1646 aa43.84■■■■■ 4.61
SEMA4A-214ENST00000485575 ABCC9O60706 1549 aa42.46■■■■■ 4.39
SEMA4A-214ENST00000485575 ZCCHC6Q5VYS8 1495 aaKnown RBP41.59■■■■■ 4.25
SEMA4A-214ENST00000485575 DCAF1Q9Y4B6 1507 aa41.24■■■■■ 4.19
SEMA4A-214ENST00000485575 MYO15BQ96JP2 1530 aa41.12■■■■■ 4.17
SEMA4A-214ENST00000485575 DCAF8L2P0C7V8 631 aa41.03■■■■■ 4.16
SEMA4A-214ENST00000485575 NACADO15069 1562 aa41.01■■■■■ 4.16
SEMA4A-214ENST00000485575 RB1CC1Q8TDY2 1594 aa40.84■■■■■ 4.13
SEMA4A-214ENST00000485575 SCRIBQ14160 1630 aa39.94■■■■□ 3.99
SEMA4A-214ENST00000485575 UNC13AQ9UPW8 1703 aa39.84■■■■□ 3.97
SEMA4A-214ENST00000485575 PABPN1Q86U42 306 aaKnown RBP eCLIP39.72■■■■□ 3.95
SEMA4A-214ENST00000485575 SHROOM4Q9ULL8 1493 aa39.62■■■■□ 3.93
SEMA4A-214ENST00000485575 BICRAQ9NZM4 1560 aa39.52■■■■□ 3.92
SEMA4A-214ENST00000485575 DNAJC5BQ9UF47 199 aa39.11■■■■□ 3.85
SEMA4A-214ENST00000485575 CECR2Q9BXF3 1484 aa38.54■■■■□ 3.76
SEMA4A-214ENST00000485575 EIF4G1Q04637 1599 aaKnown RBP38.53■■■■□ 3.76
SEMA4A-214ENST00000485575 BAZ1AQ9NRL2 1556 aaPredicted RBP38.48■■■■□ 3.75
SEMA4A-214ENST00000485575 CC2D2AQ9P2K1 1620 aa38.37■■■■□ 3.73
SEMA4A-214ENST00000485575 SMARCA4P51532 1647 aa38.36■■■■□ 3.73
SEMA4A-214ENST00000485575 MROH2BQ7Z745 1585 aa38.27■■■■□ 3.72
SEMA4A-214ENST00000485575 RSF1Q96T23 1441 aaPredicted RBP38.17■■■■□ 3.7
SEMA4A-214ENST00000485575 PEG3Q9GZU2 1588 aa38.03■■■■□ 3.68
SEMA4A-214ENST00000485575 SMARCA2P51531 1590 aa37.97■■■■□ 3.67
SEMA4A-214ENST00000485575 ATAD2BQ9ULI0 1458 aa37.93■■■■□ 3.66
SEMA4A-214ENST00000485575 WIZO95785 1651 aa37.88■■■■□ 3.65
SEMA4A-214ENST00000485575 NCAPD3P42695 1498 aa37.82■■■■□ 3.64
SEMA4A-214ENST00000485575 SUPT5HO00267 1087 aaKnown RBP37.77■■■■□ 3.64
SEMA4A-214ENST00000485575 HMGXB3Q12766 1538 aa37.72■■■■□ 3.63
SEMA4A-214ENST00000485575 BAZ1BQ9UIG0 1483 aaKnown RBP37.66■■■■□ 3.62
SEMA4A-214ENST00000485575 TOP2AP11388 1531 aaKnown RBP37.6■■■■□ 3.61
SEMA4A-214ENST00000485575 CCDC88BA6NC98 1476 aa37.12■■■■□ 3.53
SEMA4A-214ENST00000485575 CADPSQ9ULU8 1353 aa36.75■■■■□ 3.47
SEMA4A-214ENST00000485575 CFTRP13569 1480 aa36.72■■■■□ 3.47
SEMA4A-214ENST00000485575 LAMC3Q9Y6N6 1575 aa36.68■■■■□ 3.46
SEMA4A-214ENST00000485575 NESP48681 1621 aa36.67■■■■□ 3.46
SEMA4A-214ENST00000485575 ERCC6Q03468 1493 aa36.67■■■■□ 3.46
SEMA4A-214ENST00000485575 PRDM2Q13029 1718 aa36.52■■■■□ 3.44
SEMA4A-214ENST00000485575 PDS5BQ9NTI5 1447 aa36.51■■■■□ 3.43
SEMA4A-214ENST00000485575 CUX2O14529 1486 aa36.36■■■■□ 3.41
SEMA4A-214ENST00000485575 FANCD2Q9BXW9 1451 aa36.29■■■■□ 3.4
SEMA4A-214ENST00000485575 CEP164Q9UPV0 1460 aa36.18■■■■□ 3.38
SEMA4A-214ENST00000485575 KIF21AQ7Z4S6 1674 aa36.15■■■■□ 3.38
SEMA4A-214ENST00000485575 THOC2Q8NI27 1593 aaKnown RBP36.11■■■■□ 3.37
SEMA4A-214ENST00000485575 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
SEMA4A-214ENST00000485575 WRNQ14191 1432 aaPredicted RBP eCLIP35.98■■■■□ 3.35
SEMA4A-214ENST00000485575 ABCC8Q09428 1581 aa35.97■■■■□ 3.35
SEMA4A-214ENST00000485575 WDR62O43379 1518 aa35.91■■■■□ 3.34
SEMA4A-214ENST00000485575 DNMBPQ6XZF7 1577 aa35.87■■■■□ 3.33
SEMA4A-214ENST00000485575 URB2Q14146 1524 aaKnown RBP35.86■■■■□ 3.33
SEMA4A-214ENST00000485575 CUX1P39880 1505 aa35.85■■■■□ 3.33
SEMA4A-214ENST00000485575 CHIC1Q5VXU3 224 aa35.83■■■■□ 3.33
SEMA4A-214ENST00000485575 TOP2BQ02880 1626 aa35.82■■■■□ 3.32
SEMA4A-214ENST00000485575 TOPBP1Q92547 1522 aa35.82■■■■□ 3.32
SEMA4A-214ENST00000485575 BIVM-ERCC5R4GMW8 1640 aa35.81■■■■□ 3.32
SEMA4A-214ENST00000485575 SYNJ1O43426 1573 aa35.8■■■■□ 3.32
SEMA4A-214ENST00000485575 TRIM41Q8WV44 630 aa35.7■■■■□ 3.31
SEMA4A-214ENST00000485575 FGD5Q6ZNL6 1462 aa35.6■■■■□ 3.29
SEMA4A-214ENST00000485575 POLA1P09884 1462 aaPredicted RBP35.56■■■■□ 3.28
SEMA4A-214ENST00000485575 SOGA1O94964 1423 aa35.44■■■■□ 3.26
SEMA4A-214ENST00000485575 DNAJC5Q9H3Z4 198 aa35.41■■■■□ 3.26
SEMA4A-214ENST00000485575 IFT140Q96RY7 1462 aa35.41■■■■□ 3.26
SEMA4A-214ENST00000485575 TARBP1Q13395 1621 aaKnown RBP35.36■■■■□ 3.25
SEMA4A-214ENST00000485575 RAD54L2Q9Y4B4 1467 aa35.35■■■■□ 3.25
SEMA4A-214ENST00000485575 ABCA10Q8WWZ4 1543 aa35.35■■■■□ 3.25
SEMA4A-214ENST00000485575 WDR97A6NE52 1622 aa35.28■■■■□ 3.24
SEMA4A-214ENST00000485575 KIF27Q86VH2 1401 aa35.18■■■■□ 3.22
SEMA4A-214ENST00000485575 EEA1Q15075 1411 aa35.15■■■■□ 3.22
SEMA4A-214ENST00000485575 ZNF608Q9ULD9 1512 aaPredicted RBP35.13■■■■□ 3.21
SEMA4A-214ENST00000485575 ABCA5Q8WWZ7 1642 aa35.1■■■■□ 3.21
SEMA4A-214ENST00000485575 TDRD9Q8NDG6 1382 aaKnown RBP35.09■■■■□ 3.21
SEMA4A-214ENST00000485575 GAPVD1Q14C86 1478 aa35.05■■■■□ 3.2
SEMA4A-214ENST00000485575 RUSC2Q8N2Y8 1516 aa35.02■■■■□ 3.2
SEMA4A-214ENST00000485575 EIF4G3O43432 1585 aaKnown RBP35.02■■■■□ 3.2
SEMA4A-214ENST00000485575 AQRO60306 1485 aaKnown RBP eCLIP35.01■■■■□ 3.19
SEMA4A-214ENST00000485575 ERICH3Q5RHP9 1530 aa34.96■■■■□ 3.19
SEMA4A-214ENST00000485575 GRIN2BQ13224 1484 aa34.95■■■■□ 3.19
SEMA4A-214ENST00000485575 OSCARQ8IYS5 282 aa34.91■■■■□ 3.18
SEMA4A-214ENST00000485575 IGF1RP08069 1367 aa34.9■■■■□ 3.18
SEMA4A-214ENST00000485575 PBRM1Q86U86 1689 aa34.9■■■■□ 3.18
SEMA4A-214ENST00000485575 CSRNP3Q8WYN3 585 aa34.9■■■■□ 3.18
SEMA4A-214ENST00000485575 FAM9AQ8IZU1 332 aaPredicted RBP34.84■■■■□ 3.17
SEMA4A-214ENST00000485575 CUL7Q14999 1698 aa34.8■■■■□ 3.16
SEMA4A-214ENST00000485575 MAGI1Q96QZ7 1491 aaPredicted RBP34.78■■■■□ 3.16
SEMA4A-214ENST00000485575 SNAPC4Q5SXM2 1469 aa34.72■■■■□ 3.15
SEMA4A-214ENST00000485575 PRXQ9BXM0 1461 aa34.72■■■■□ 3.15
SEMA4A-214ENST00000485575 CARMIL1Q5VZK9 1371 aa34.72■■■■□ 3.15
SEMA4A-214ENST00000485575 FHAD1B1AJZ9 1412 aa34.71■■■■□ 3.15
SEMA4A-214ENST00000485575 ADAMTS12P58397 1594 aa34.7■■■■□ 3.14
SEMA4A-214ENST00000485575 KIF21BO75037 1637 aa34.66■■■■□ 3.14
SEMA4A-214ENST00000485575 RAPGEF2Q9Y4G8 1499 aa34.63■■■■□ 3.13
SEMA4A-214ENST00000485575 FBLN2P98095 1184 aa34.62■■■■□ 3.13
SEMA4A-214ENST00000485575 SYNJ2O15056 1496 aa34.61■■■■□ 3.13
SEMA4A-214ENST00000485575 CHMP7Q8WUX9 453 aaPredicted RBP34.56■■■■□ 3.12
SEMA4A-214ENST00000485575 GOLGA3Q08378 1498 aa34.52■■■■□ 3.12
SEMA4A-214ENST00000485575 GRIN2AQ12879 1464 aa34.48■■■■□ 3.11
SEMA4A-214ENST00000485575 CHD1O14646 1710 aa34.41■■■■□ 3.1
SEMA4A-214ENST00000485575 NUP160Q12769 1436 aa34.31■■■■□ 3.08
SEMA4A-214ENST00000485575 LOC105371045A0A1W2PR82 267 aa34.29■■■■□ 3.08
SEMA4A-214ENST00000485575 UBTFP17480 764 aaKnown RBP34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms