RNA–Protein interactions for RNA: ENST00000485494.1

SFMBT1-206, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 5

Gene SFMBT1, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-206ENST00000485494 NISCHQ9Y2I1 1504 aa29.74■■■□□ 2.35
SFMBT1-206ENST00000485494 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
SFMBT1-206ENST00000485494 ABCC9O60706 1549 aa24.96■■□□□ 1.59
SFMBT1-206ENST00000485494 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
SFMBT1-206ENST00000485494 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
SFMBT1-206ENST00000485494 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
SFMBT1-206ENST00000485494 NACADO15069 1562 aa24.45■■□□□ 1.5
SFMBT1-206ENST00000485494 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
SFMBT1-206ENST00000485494 DCAF8L2P0C7V8 631 aa24.23■■□□□ 1.47
SFMBT1-206ENST00000485494 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
SFMBT1-206ENST00000485494 UNC13AQ9UPW8 1703 aa23.74■■□□□ 1.39
SFMBT1-206ENST00000485494 SHROOM4Q9ULL8 1493 aa23.67■■□□□ 1.38
SFMBT1-206ENST00000485494 DNAJC5BQ9UF47 199 aa23.48■■□□□ 1.35
SFMBT1-206ENST00000485494 BICRAQ9NZM4 1560 aa23.38■■□□□ 1.33
SFMBT1-206ENST00000485494 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
SFMBT1-206ENST00000485494 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
SFMBT1-206ENST00000485494 BAZ1AQ9NRL2 1556 aaPredicted RBP23.06■■□□□ 1.28
SFMBT1-206ENST00000485494 SMARCA4P51532 1647 aa22.93■■□□□ 1.26
SFMBT1-206ENST00000485494 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
SFMBT1-206ENST00000485494 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
SFMBT1-206ENST00000485494 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
SFMBT1-206ENST00000485494 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
SFMBT1-206ENST00000485494 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
SFMBT1-206ENST00000485494 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
SFMBT1-206ENST00000485494 WIZO95785 1651 aa22.68■■□□□ 1.22
SFMBT1-206ENST00000485494 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
SFMBT1-206ENST00000485494 CHIC1Q5VXU3 224 aa22.56■■□□□ 1.2
SFMBT1-206ENST00000485494 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
SFMBT1-206ENST00000485494 CC2D2AQ9P2K1 1620 aa22.55■■□□□ 1.2
SFMBT1-206ENST00000485494 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
SFMBT1-206ENST00000485494 HMGXB3Q12766 1538 aa22.51■■□□□ 1.19
SFMBT1-206ENST00000485494 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
SFMBT1-206ENST00000485494 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
SFMBT1-206ENST00000485494 CCDC88BA6NC98 1476 aa22.19■■□□□ 1.14
SFMBT1-206ENST00000485494 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
SFMBT1-206ENST00000485494 CFTRP13569 1480 aa21.88■■□□□ 1.09
SFMBT1-206ENST00000485494 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
SFMBT1-206ENST00000485494 CADPSQ9ULU8 1353 aa21.81■■□□□ 1.08
SFMBT1-206ENST00000485494 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.05
SFMBT1-206ENST00000485494 PDS5BQ9NTI5 1447 aa21.58■■□□□ 1.05
SFMBT1-206ENST00000485494 BIVM-ERCC5R4GMW8 1640 aa21.58■■□□□ 1.04
SFMBT1-206ENST00000485494 TRIM41Q8WV44 630 aa21.57■■□□□ 1.04
SFMBT1-206ENST00000485494 DNAJC5Q9H3Z4 198 aa21.57■■□□□ 1.04
SFMBT1-206ENST00000485494 ABCC8Q09428 1581 aa21.56■■□□□ 1.04
SFMBT1-206ENST00000485494 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
SFMBT1-206ENST00000485494 ERCC6Q03468 1493 aa21.55■■□□□ 1.04
SFMBT1-206ENST00000485494 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
SFMBT1-206ENST00000485494 CUX2O14529 1486 aa21.52■■□□□ 1.03
SFMBT1-206ENST00000485494 NESP48681 1621 aa21.48■■□□□ 1.03
SFMBT1-206ENST00000485494 CEP164Q9UPV0 1460 aa21.47■■□□□ 1.03
SFMBT1-206ENST00000485494 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
SFMBT1-206ENST00000485494 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
SFMBT1-206ENST00000485494 DNMBPQ6XZF7 1577 aa21.41■■□□□ 1.02
SFMBT1-206ENST00000485494 CUX1P39880 1505 aa21.39■■□□□ 1.02
SFMBT1-206ENST00000485494 EEA1Q15075 1411 aa21.37■■□□□ 1.01
SFMBT1-206ENST00000485494 TOPBP1Q92547 1522 aa21.3■■□□□ 1
SFMBT1-206ENST00000485494 MRC2Q9UBG0 1479 aa21.27■■□□□ 1
SFMBT1-206ENST00000485494 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
SFMBT1-206ENST00000485494 WDR62O43379 1518 aa21.22■□□□□ 0.99
SFMBT1-206ENST00000485494 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
SFMBT1-206ENST00000485494 THOC2Q8NI27 1593 aaKnown RBP21.2■□□□□ 0.98
SFMBT1-206ENST00000485494 POLA1P09884 1462 aaPredicted RBP21.15■□□□□ 0.98
SFMBT1-206ENST00000485494 WDR97A6NE52 1622 aa21.14■□□□□ 0.97
SFMBT1-206ENST00000485494 ABCA10Q8WWZ4 1543 aa21.13■□□□□ 0.97
SFMBT1-206ENST00000485494 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
SFMBT1-206ENST00000485494 SOGA1O94964 1423 aa21.09■□□□□ 0.97
SFMBT1-206ENST00000485494 KIF21BO75037 1637 aa21.05■□□□□ 0.96
SFMBT1-206ENST00000485494 TARBP1Q13395 1621 aaKnown RBP21.05■□□□□ 0.96
SFMBT1-206ENST00000485494 CSRNP3Q8WYN3 585 aa21.03■□□□□ 0.96
SFMBT1-206ENST00000485494 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
SFMBT1-206ENST00000485494 ABCA5Q8WWZ7 1642 aa20.99■□□□□ 0.95
SFMBT1-206ENST00000485494 RUSC2Q8N2Y8 1516 aa20.98■□□□□ 0.95
SFMBT1-206ENST00000485494 ERICH3Q5RHP9 1530 aa20.97■□□□□ 0.95
SFMBT1-206ENST00000485494 CUL7Q14999 1698 aa20.96■□□□□ 0.95
SFMBT1-206ENST00000485494 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
SFMBT1-206ENST00000485494 GOLGA3Q08378 1498 aa20.91■□□□□ 0.94
SFMBT1-206ENST00000485494 PRXQ9BXM0 1461 aa20.91■□□□□ 0.94
SFMBT1-206ENST00000485494 FAM9AQ8IZU1 332 aaPredicted RBP20.9■□□□□ 0.94
SFMBT1-206ENST00000485494 PBRM1Q86U86 1689 aa20.88■□□□□ 0.93
SFMBT1-206ENST00000485494 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
SFMBT1-206ENST00000485494 IGF1RP08069 1367 aa20.85■□□□□ 0.93
SFMBT1-206ENST00000485494 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
SFMBT1-206ENST00000485494 GRIN2BQ13224 1484 aa20.79■□□□□ 0.92
SFMBT1-206ENST00000485494 RAPGEF2Q9Y4G8 1499 aa20.79■□□□□ 0.92
SFMBT1-206ENST00000485494 EIF4G3O43432 1585 aaKnown RBP20.78■□□□□ 0.92
SFMBT1-206ENST00000485494 CARMIL1Q5VZK9 1371 aa20.76■□□□□ 0.91
SFMBT1-206ENST00000485494 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
SFMBT1-206ENST00000485494 LOC105371045A0A1W2PR82 267 aa20.75■□□□□ 0.91
SFMBT1-206ENST00000485494 MAGI1Q96QZ7 1491 aaPredicted RBP20.7■□□□□ 0.9
SFMBT1-206ENST00000485494 ADAMTS12P58397 1594 aa20.7■□□□□ 0.9
SFMBT1-206ENST00000485494 FHAD1B1AJZ9 1412 aa20.69■□□□□ 0.9
SFMBT1-206ENST00000485494 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
SFMBT1-206ENST00000485494 CTTNBP2Q8WZ74 1663 aa20.68■□□□□ 0.9
SFMBT1-206ENST00000485494 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.9
SFMBT1-206ENST00000485494 UBTFP17480 764 aaKnown RBP20.65■□□□□ 0.9
SFMBT1-206ENST00000485494 OSCARQ8IYS5 282 aa20.59■□□□□ 0.89
SFMBT1-206ENST00000485494 CEP162Q5TB80 1403 aa20.58■□□□□ 0.88
SFMBT1-206ENST00000485494 SYNJ2O15056 1496 aa20.57■□□□□ 0.88
SFMBT1-206ENST00000485494 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
SFMBT1-206ENST00000485494 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms