RNA–Protein interactions for RNA: ENST00000485413.1

GRIN1-213, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 3

Gene GRIN1, Length 401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-213ENST00000485413 NISCHQ9Y2I1 1504 aa48.33■■■■■ 5.33
GRIN1-213ENST00000485413 CCDC180Q9P1Z9 1646 aa42.93■■■■■ 4.46
GRIN1-213ENST00000485413 ABCC9O60706 1549 aa42■■■■■ 4.31
GRIN1-213ENST00000485413 RB1CC1Q8TDY2 1594 aa40.47■■■■■ 4.07
GRIN1-213ENST00000485413 NACADO15069 1562 aa40.46■■■■■ 4.07
GRIN1-213ENST00000485413 DCAF8L2P0C7V8 631 aa40.36■■■■■ 4.05
GRIN1-213ENST00000485413 MYO15BQ96JP2 1530 aa40.3■■■■■ 4.04
GRIN1-213ENST00000485413 ZCCHC6Q5VYS8 1495 aaKnown RBP40.25■■■■■ 4.03
GRIN1-213ENST00000485413 DCAF1Q9Y4B6 1507 aa40.07■■■■■ 4.01
GRIN1-213ENST00000485413 UNC13AQ9UPW8 1703 aa39.3■■■■□ 3.88
GRIN1-213ENST00000485413 PABPN1Q86U42 306 aaKnown RBP eCLIP39.28■■■■□ 3.88
GRIN1-213ENST00000485413 BICRAQ9NZM4 1560 aa39.16■■■■□ 3.86
GRIN1-213ENST00000485413 SCRIBQ14160 1630 aa39.07■■■■□ 3.85
GRIN1-213ENST00000485413 SHROOM4Q9ULL8 1493 aa38.97■■■■□ 3.83
GRIN1-213ENST00000485413 DNAJC5BQ9UF47 199 aa38.61■■■■□ 3.77
GRIN1-213ENST00000485413 EIF4G1Q04637 1599 aaKnown RBP38.17■■■■□ 3.7
GRIN1-213ENST00000485413 CC2D2AQ9P2K1 1620 aa37.99■■■■□ 3.67
GRIN1-213ENST00000485413 CECR2Q9BXF3 1484 aa37.82■■■■□ 3.64
GRIN1-213ENST00000485413 BAZ1AQ9NRL2 1556 aaPredicted RBP37.47■■■■□ 3.59
GRIN1-213ENST00000485413 SMARCA4P51532 1647 aa37.44■■■■□ 3.58
GRIN1-213ENST00000485413 NCAPD3P42695 1498 aa37.38■■■■□ 3.57
GRIN1-213ENST00000485413 ATAD2BQ9ULI0 1458 aa37.33■■■■□ 3.57
GRIN1-213ENST00000485413 SMARCA2P51531 1590 aa37.29■■■■□ 3.56
GRIN1-213ENST00000485413 MROH2BQ7Z745 1585 aa37.18■■■■□ 3.54
GRIN1-213ENST00000485413 PEG3Q9GZU2 1588 aa37.17■■■■□ 3.54
GRIN1-213ENST00000485413 HMGXB3Q12766 1538 aa37.12■■■■□ 3.53
GRIN1-213ENST00000485413 BAZ1BQ9UIG0 1483 aaKnown RBP37■■■■□ 3.51
GRIN1-213ENST00000485413 RSF1Q96T23 1441 aaPredicted RBP36.82■■■■□ 3.48
GRIN1-213ENST00000485413 WIZO95785 1651 aa36.7■■■■□ 3.47
GRIN1-213ENST00000485413 TOP2AP11388 1531 aaKnown RBP36.43■■■■□ 3.42
GRIN1-213ENST00000485413 LAMC3Q9Y6N6 1575 aa36.32■■■■□ 3.4
GRIN1-213ENST00000485413 NESP48681 1621 aa36.31■■■■□ 3.4
GRIN1-213ENST00000485413 CADPSQ9ULU8 1353 aa36.27■■■■□ 3.4
GRIN1-213ENST00000485413 ERCC6Q03468 1493 aa36.27■■■■□ 3.4
GRIN1-213ENST00000485413 PDS5BQ9NTI5 1447 aa36.16■■■■□ 3.38
GRIN1-213ENST00000485413 CFTRP13569 1480 aa36.03■■■■□ 3.36
GRIN1-213ENST00000485413 CCDC88BA6NC98 1476 aa36.01■■■■□ 3.36
GRIN1-213ENST00000485413 CUX2O14529 1486 aa35.97■■■■□ 3.35
GRIN1-213ENST00000485413 SUPT5HO00267 1087 aaKnown RBP35.81■■■■□ 3.32
GRIN1-213ENST00000485413 FANCD2Q9BXW9 1451 aa35.8■■■■□ 3.32
GRIN1-213ENST00000485413 KIF21AQ7Z4S6 1674 aa35.79■■■■□ 3.32
GRIN1-213ENST00000485413 THOC2Q8NI27 1593 aaKnown RBP35.77■■■■□ 3.32
GRIN1-213ENST00000485413 CEP164Q9UPV0 1460 aa35.75■■■■□ 3.31
GRIN1-213ENST00000485413 MRC2Q9UBG0 1479 aa35.72■■■■□ 3.31
GRIN1-213ENST00000485413 WDR62O43379 1518 aa35.58■■■■□ 3.29
GRIN1-213ENST00000485413 PRDM2Q13029 1718 aa35.54■■■■□ 3.28
GRIN1-213ENST00000485413 URB2Q14146 1524 aaKnown RBP35.39■■■■□ 3.26
GRIN1-213ENST00000485413 ABCC8Q09428 1581 aa35.32■■■■□ 3.24
GRIN1-213ENST00000485413 TOPBP1Q92547 1522 aa35.2■■■■□ 3.23
GRIN1-213ENST00000485413 DNMBPQ6XZF7 1577 aa35.15■■■■□ 3.22
GRIN1-213ENST00000485413 IFT140Q96RY7 1462 aa35.05■■■■□ 3.2
GRIN1-213ENST00000485413 DNAJC5Q9H3Z4 198 aa34.92■■■■□ 3.18
GRIN1-213ENST00000485413 POLA1P09884 1462 aaPredicted RBP34.9■■■■□ 3.18
GRIN1-213ENST00000485413 CUX1P39880 1505 aa34.89■■■■□ 3.18
GRIN1-213ENST00000485413 SOGA1O94964 1423 aa34.81■■■■□ 3.16
GRIN1-213ENST00000485413 FGD5Q6ZNL6 1462 aa34.79■■■■□ 3.16
GRIN1-213ENST00000485413 ZNF608Q9ULD9 1512 aaPredicted RBP34.79■■■■□ 3.16
GRIN1-213ENST00000485413 TARBP1Q13395 1621 aaKnown RBP34.77■■■■□ 3.16
GRIN1-213ENST00000485413 WRNQ14191 1432 aaPredicted RBP eCLIP34.72■■■■□ 3.15
GRIN1-213ENST00000485413 RAD54L2Q9Y4B4 1467 aa34.71■■■■□ 3.15
GRIN1-213ENST00000485413 AQRO60306 1485 aaKnown RBP eCLIP34.62■■■■□ 3.13
GRIN1-213ENST00000485413 WDR97A6NE52 1622 aa34.62■■■■□ 3.13
GRIN1-213ENST00000485413 EIF4G3O43432 1585 aaKnown RBP34.62■■■■□ 3.13
GRIN1-213ENST00000485413 TOP2BQ02880 1626 aa34.6■■■■□ 3.13
GRIN1-213ENST00000485413 TDRD9Q8NDG6 1382 aaKnown RBP34.57■■■■□ 3.12
GRIN1-213ENST00000485413 BIVM-ERCC5R4GMW8 1640 aa34.55■■■■□ 3.12
GRIN1-213ENST00000485413 ABCA10Q8WWZ4 1543 aa34.52■■■■□ 3.12
GRIN1-213ENST00000485413 SYNJ1O43426 1573 aa34.52■■■■□ 3.12
GRIN1-213ENST00000485413 OSCARQ8IYS5 282 aa34.51■■■■□ 3.12
GRIN1-213ENST00000485413 GRIN2BQ13224 1484 aa34.41■■■■□ 3.1
GRIN1-213ENST00000485413 GAPVD1Q14C86 1478 aa34.39■■■■□ 3.1
GRIN1-213ENST00000485413 MAGI1Q96QZ7 1491 aaPredicted RBP34.33■■■■□ 3.09
GRIN1-213ENST00000485413 SNAPC4Q5SXM2 1469 aa34.3■■■■□ 3.08
GRIN1-213ENST00000485413 ABCA5Q8WWZ7 1642 aa34.3■■■■□ 3.08
GRIN1-213ENST00000485413 FBLN2P98095 1184 aa34.23■■■■□ 3.07
GRIN1-213ENST00000485413 CHMP7Q8WUX9 453 aaPredicted RBP34.2■■■■□ 3.07
GRIN1-213ENST00000485413 SYNJ2O15056 1496 aa34.18■■■■□ 3.06
GRIN1-213ENST00000485413 PBRM1Q86U86 1689 aa34.14■■■■□ 3.06
GRIN1-213ENST00000485413 ERICH3Q5RHP9 1530 aa34.11■■■■□ 3.05
GRIN1-213ENST00000485413 CHD1O14646 1710 aa34.1■■■■□ 3.05
GRIN1-213ENST00000485413 KIF27Q86VH2 1401 aa34.04■■■■□ 3.04
GRIN1-213ENST00000485413 FHAD1B1AJZ9 1412 aa34.03■■■■□ 3.04
GRIN1-213ENST00000485413 ADAMTS12P58397 1594 aa33.97■■■■□ 3.03
GRIN1-213ENST00000485413 GRIN2AQ12879 1464 aa33.93■■■■□ 3.02
GRIN1-213ENST00000485413 IGF1RP08069 1367 aa33.91■■■■□ 3.02
GRIN1-213ENST00000485413 TRIM41Q8WV44 630 aa33.91■■■■□ 3.02
GRIN1-213ENST00000485413 CLASP1Q7Z460 1538 aa33.88■■■■□ 3.01
GRIN1-213ENST00000485413 ARHGEF11O15085 1522 aa33.83■■■■□ 3.01
GRIN1-213ENST00000485413 NUP160Q12769 1436 aa33.82■■■■□ 3
GRIN1-213ENST00000485413 RIMBP3CA6NJZ7 1639 aa33.77■■■■□ 3
GRIN1-213ENST00000485413 RIMBP3BA6NNM3 1639 aa33.77■■■■□ 3
GRIN1-213ENST00000485413 RIMBP3Q9UFD9 1639 aa33.77■■■■□ 3
GRIN1-213ENST00000485413 CUL7Q14999 1698 aa33.73■■■□□ 2.99
GRIN1-213ENST00000485413 CARMIL1Q5VZK9 1371 aa33.7■■■□□ 2.98
GRIN1-213ENST00000485413 CEP170Q5SW79 1584 aa33.68■■■□□ 2.98
GRIN1-213ENST00000485413 RUSC2Q8N2Y8 1516 aa33.58■■■□□ 2.97
GRIN1-213ENST00000485413 CYB5RLQ6IPT4 315 aa33.56■■■□□ 2.96
GRIN1-213ENST00000485413 ARAP1Q96P48 1450 aa33.55■■■□□ 2.96
GRIN1-213ENST00000485413 JPH4Q96JJ6 628 aa33.51■■■□□ 2.95
GRIN1-213ENST00000485413 KIAA0586Q9BVV6 1533 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms