RNA–Protein interactions for RNA: ENST00000485400.1

MMS19-218, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

TSL 2

Gene MMS19, Length 1,513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-218ENST00000485400 NISCHQ9Y2I1 1504 aa36.11■■■■□ 3.37
MMS19-218ENST00000485400 CCDC180Q9P1Z9 1646 aa31.81■■■□□ 2.68
MMS19-218ENST00000485400 ABCC9O60706 1549 aa30.8■■■□□ 2.52
MMS19-218ENST00000485400 ZCCHC6Q5VYS8 1495 aaKnown RBP30.19■■■□□ 2.42
MMS19-218ENST00000485400 DCAF8L2P0C7V8 631 aa30.08■■■□□ 2.41
MMS19-218ENST00000485400 DCAF1Q9Y4B6 1507 aa29.8■■■□□ 2.36
MMS19-218ENST00000485400 NACADO15069 1562 aa29.77■■■□□ 2.36
MMS19-218ENST00000485400 RB1CC1Q8TDY2 1594 aa29.71■■■□□ 2.35
MMS19-218ENST00000485400 MYO15BQ96JP2 1530 aa29.7■■■□□ 2.35
MMS19-218ENST00000485400 SCRIBQ14160 1630 aa29.21■■■□□ 2.27
MMS19-218ENST00000485400 UNC13AQ9UPW8 1703 aa29.17■■■□□ 2.26
MMS19-218ENST00000485400 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.23
MMS19-218ENST00000485400 PABPN1Q86U42 306 aaKnown RBP eCLIP28.9■■■□□ 2.225e-8■■■■■ 27.1
MMS19-218ENST00000485400 BICRAQ9NZM4 1560 aa28.89■■■□□ 2.22
MMS19-218ENST00000485400 CECR2Q9BXF3 1484 aa28.18■■■□□ 2.1
MMS19-218ENST00000485400 EIF4G1Q04637 1599 aaKnown RBP28.05■■■□□ 2.08
MMS19-218ENST00000485400 SMARCA4P51532 1647 aa27.93■■■□□ 2.06
MMS19-218ENST00000485400 MROH2BQ7Z745 1585 aa27.91■■■□□ 2.06
MMS19-218ENST00000485400 BAZ1AQ9NRL2 1556 aaPredicted RBP27.91■■■□□ 2.06
MMS19-218ENST00000485400 DNAJC5BQ9UF47 199 aa27.87■■■□□ 2.05
MMS19-218ENST00000485400 CC2D2AQ9P2K1 1620 aa27.83■■■□□ 2.05
MMS19-218ENST00000485400 RSF1Q96T23 1441 aaPredicted RBP27.74■■■□□ 2.03
MMS19-218ENST00000485400 WIZO95785 1651 aa27.66■■■□□ 2.02
MMS19-218ENST00000485400 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.01
MMS19-218ENST00000485400 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
MMS19-218ENST00000485400 SMARCA2P51531 1590 aa27.57■■■□□ 2
MMS19-218ENST00000485400 SUPT5HO00267 1087 aaKnown RBP27.51■■■□□ 2
MMS19-218ENST00000485400 NCAPD3P42695 1498 aa27.5■■□□□ 1.99
MMS19-218ENST00000485400 BAZ1BQ9UIG0 1483 aaKnown RBP27.43■■□□□ 1.98
MMS19-218ENST00000485400 HMGXB3Q12766 1538 aa27.39■■□□□ 1.98
MMS19-218ENST00000485400 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
MMS19-218ENST00000485400 CCDC88BA6NC98 1476 aa27.02■■□□□ 1.92
MMS19-218ENST00000485400 NESP48681 1621 aa26.83■■□□□ 1.89
MMS19-218ENST00000485400 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
MMS19-218ENST00000485400 CFTRP13569 1480 aa26.7■■□□□ 1.86
MMS19-218ENST00000485400 LAMC3Q9Y6N6 1575 aa26.68■■□□□ 1.86
MMS19-218ENST00000485400 PRDM2Q13029 1718 aa26.52■■□□□ 1.84
MMS19-218ENST00000485400 KIF21AQ7Z4S6 1674 aa26.49■■□□□ 1.83
MMS19-218ENST00000485400 PDS5BQ9NTI5 1447 aa26.47■■□□□ 1.83
MMS19-218ENST00000485400 FANCD2Q9BXW9 1451 aa26.47■■□□□ 1.83
MMS19-218ENST00000485400 ERCC6Q03468 1493 aa26.43■■□□□ 1.82
MMS19-218ENST00000485400 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
MMS19-218ENST00000485400 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
MMS19-218ENST00000485400 THOC2Q8NI27 1593 aaKnown RBP26.23■■□□□ 1.79
MMS19-218ENST00000485400 MRC2Q9UBG0 1479 aa26.21■■□□□ 1.79
MMS19-218ENST00000485400 URB2Q14146 1524 aaKnown RBP26.21■■□□□ 1.79
MMS19-218ENST00000485400 CUX1P39880 1505 aa26.13■■□□□ 1.77
MMS19-218ENST00000485400 WDR62O43379 1518 aa26.11■■□□□ 1.77
MMS19-218ENST00000485400 WRNQ14191 1432 aaPredicted RBP eCLIP26.11■■□□□ 1.77
MMS19-218ENST00000485400 TOPBP1Q92547 1522 aa26.11■■□□□ 1.77
MMS19-218ENST00000485400 DNMBPQ6XZF7 1577 aa26.09■■□□□ 1.77
MMS19-218ENST00000485400 SYNJ1O43426 1573 aa26.08■■□□□ 1.77
MMS19-218ENST00000485400 TOP2BQ02880 1626 aa26■■□□□ 1.75
MMS19-218ENST00000485400 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
MMS19-218ENST00000485400 FGD5Q6ZNL6 1462 aa25.95■■□□□ 1.75
MMS19-218ENST00000485400 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
MMS19-218ENST00000485400 POLA1P09884 1462 aaPredicted RBP25.93■■□□□ 1.74
MMS19-218ENST00000485400 CUX2O14529 1486 aa25.9■■□□□ 1.74
MMS19-218ENST00000485400 RAD54L2Q9Y4B4 1467 aa25.87■■□□□ 1.73
MMS19-218ENST00000485400 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
MMS19-218ENST00000485400 SOGA1O94964 1423 aa25.82■■□□□ 1.72
MMS19-218ENST00000485400 TARBP1Q13395 1621 aaKnown RBP25.79■■□□□ 1.72
MMS19-218ENST00000485400 IFT140Q96RY7 1462 aa25.76■■□□□ 1.71
MMS19-218ENST00000485400 ZNF608Q9ULD9 1512 aaPredicted RBP25.72■■□□□ 1.71
MMS19-218ENST00000485400 WDR97A6NE52 1622 aa25.71■■□□□ 1.71
MMS19-218ENST00000485400 ABCA10Q8WWZ4 1543 aa25.67■■□□□ 1.7
MMS19-218ENST00000485400 TDRD9Q8NDG6 1382 aaKnown RBP25.67■■□□□ 1.7
MMS19-218ENST00000485400 AQRO60306 1485 aaKnown RBP eCLIP25.63■■□□□ 1.69
MMS19-218ENST00000485400 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
MMS19-218ENST00000485400 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.69
MMS19-218ENST00000485400 ABCA5Q8WWZ7 1642 aa25.56■■□□□ 1.68
MMS19-218ENST00000485400 GAPVD1Q14C86 1478 aa25.52■■□□□ 1.68
MMS19-218ENST00000485400 KIF27Q86VH2 1401 aa25.49■■□□□ 1.67
MMS19-218ENST00000485400 PBRM1Q86U86 1689 aa25.46■■□□□ 1.67
MMS19-218ENST00000485400 FAM9AQ8IZU1 332 aaPredicted RBP25.46■■□□□ 1.67
MMS19-218ENST00000485400 GRIN2BQ13224 1484 aa25.42■■□□□ 1.66
MMS19-218ENST00000485400 IGF1RP08069 1367 aa25.37■■□□□ 1.65
MMS19-218ENST00000485400 SNAPC4Q5SXM2 1469 aa25.37■■□□□ 1.65
MMS19-218ENST00000485400 ERICH3Q5RHP9 1530 aa25.35■■□□□ 1.65
MMS19-218ENST00000485400 EEA1Q15075 1411 aa25.28■■□□□ 1.64
MMS19-218ENST00000485400 CSRNP3Q8WYN3 585 aa25.27■■□□□ 1.64
MMS19-218ENST00000485400 MAGI1Q96QZ7 1491 aaPredicted RBP25.27■■□□□ 1.64
MMS19-218ENST00000485400 ADAMTS12P58397 1594 aa25.27■■□□□ 1.64
MMS19-218ENST00000485400 FBLN2P98095 1184 aa25.23■■□□□ 1.63
MMS19-218ENST00000485400 CARMIL1Q5VZK9 1371 aa25.22■■□□□ 1.63
MMS19-218ENST00000485400 CUL7Q14999 1698 aa25.21■■□□□ 1.63
MMS19-218ENST00000485400 FHAD1B1AJZ9 1412 aa25.21■■□□□ 1.63
MMS19-218ENST00000485400 CHD1O14646 1710 aa25.2■■□□□ 1.62
MMS19-218ENST00000485400 SYNJ2O15056 1496 aa25.19■■□□□ 1.62
MMS19-218ENST00000485400 CHMP7Q8WUX9 453 aaPredicted RBP25.17■■□□□ 1.62
MMS19-218ENST00000485400 EHMT2Q96KQ7 1210 aa25.17■■□□□ 1.62
MMS19-218ENST00000485400 PRXQ9BXM0 1461 aa25.16■■□□□ 1.62
MMS19-218ENST00000485400 GRIN2AQ12879 1464 aa25.12■■□□□ 1.61
MMS19-218ENST00000485400 RAPGEF2Q9Y4G8 1499 aa25.11■■□□□ 1.61
MMS19-218ENST00000485400 KIF21BO75037 1637 aa25.05■■□□□ 1.6
MMS19-218ENST00000485400 CEP170Q5SW79 1584 aa25.03■■□□□ 1.6
MMS19-218ENST00000485400 NUP160Q12769 1436 aa24.97■■□□□ 1.59
MMS19-218ENST00000485400 LOC105371045A0A1W2PR82 267 aa24.96■■□□□ 1.59
MMS19-218ENST00000485400 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
MMS19-218ENST00000485400 GOLGA3Q08378 1498 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms