RNA–Protein interactions for RNA: ENST00000485290.1

FBXO18-213, Transcript of F-box DNA helicase 1, humanhuman

TSL 2

Gene FBXO18, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO18-213ENST00000485290 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
FBXO18-213ENST00000485290 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
FBXO18-213ENST00000485290 NISCHQ9Y2I1 1504 aa17.76■□□□□ 0.43
FBXO18-213ENST00000485290 ABCC9O60706 1549 aa16.95■□□□□ 0.3
FBXO18-213ENST00000485290 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
FBXO18-213ENST00000485290 CCDC180Q9P1Z9 1646 aa16.21■□□□□ 0.19
FBXO18-213ENST00000485290 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
FBXO18-213ENST00000485290 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
FBXO18-213ENST00000485290 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
FBXO18-213ENST00000485290 DNAJC5Q9H3Z4 198 aa15.76■□□□□ 0.11
FBXO18-213ENST00000485290 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
FBXO18-213ENST00000485290 NACADO15069 1562 aa15.52■□□□□ 0.07
FBXO18-213ENST00000485290 BICRAQ9NZM4 1560 aa15.43■□□□□ 0.06
FBXO18-213ENST00000485290 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
FBXO18-213ENST00000485290 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
FBXO18-213ENST00000485290 CC2D2AQ9P2K1 1620 aa15.27■□□□□ 0.03
FBXO18-213ENST00000485290 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
FBXO18-213ENST00000485290 SHROOM4Q9ULL8 1493 aa15.13■□□□□ 0.01
FBXO18-213ENST00000485290 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
FBXO18-213ENST00000485290 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
FBXO18-213ENST00000485290 FOXD1Q16676 465 aa14.96□□□□□ -0.01
FBXO18-213ENST00000485290 CUX2O14529 1486 aa14.92□□□□□ -0.02
FBXO18-213ENST00000485290 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
FBXO18-213ENST00000485290 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
FBXO18-213ENST00000485290 ERCC6Q03468 1493 aa14.65□□□□□ -0.06
FBXO18-213ENST00000485290 DCAF1Q9Y4B6 1507 aa14.63□□□□□ -0.07
FBXO18-213ENST00000485290 ZCCHC6Q5VYS8 1495 aaKnown RBP14.58□□□□□ -0.08
FBXO18-213ENST00000485290 THOC2Q8NI27 1593 aaKnown RBP14.38□□□□□ -0.11
FBXO18-213ENST00000485290 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
FBXO18-213ENST00000485290 NESP48681 1621 aa14.37□□□□□ -0.11
FBXO18-213ENST00000485290 PLPPR3Q6T4P5 718 aa14.23□□□□□ -0.13
FBXO18-213ENST00000485290 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
FBXO18-213ENST00000485290 SMARCA2P51531 1590 aa14.2□□□□□ -0.14
FBXO18-213ENST00000485290 HMGXB3Q12766 1538 aa14.18□□□□□ -0.14
FBXO18-213ENST00000485290 LAMC3Q9Y6N6 1575 aa14.11□□□□□ -0.15
FBXO18-213ENST00000485290 BAZ1AQ9NRL2 1556 aaPredicted RBP14.1□□□□□ -0.15
FBXO18-213ENST00000485290 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
FBXO18-213ENST00000485290 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
FBXO18-213ENST00000485290 PDS5BQ9NTI5 1447 aa14.06□□□□□ -0.16
FBXO18-213ENST00000485290 WDR62O43379 1518 aa14.02□□□□□ -0.16
FBXO18-213ENST00000485290 PPP6R1Q9UPN7 881 aa14.02□□□□□ -0.17
FBXO18-213ENST00000485290 MRC2Q9UBG0 1479 aa14□□□□□ -0.17
FBXO18-213ENST00000485290 RIMBP3CA6NJZ7 1639 aa14□□□□□ -0.17
FBXO18-213ENST00000485290 RIMBP3BA6NNM3 1639 aa14□□□□□ -0.17
FBXO18-213ENST00000485290 RIMBP3Q9UFD9 1639 aa14□□□□□ -0.17
FBXO18-213ENST00000485290 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
FBXO18-213ENST00000485290 SMARCA4P51532 1647 aa13.99□□□□□ -0.17
FBXO18-213ENST00000485290 ADRA2BP18089 450 aa13.98□□□□□ -0.17
FBXO18-213ENST00000485290 PIAS4Q8N2W9 510 aaPredicted RBP13.98□□□□□ -0.17
FBXO18-213ENST00000485290 MSH5O43196 834 aa13.93□□□□□ -0.18
FBXO18-213ENST00000485290 ARHGEF11O15085 1522 aa13.9□□□□□ -0.18
FBXO18-213ENST00000485290 PEG3Q9GZU2 1588 aa13.89□□□□□ -0.19
FBXO18-213ENST00000485290 CADPSQ9ULU8 1353 aa13.88□□□□□ -0.19
FBXO18-213ENST00000485290 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.2
FBXO18-213ENST00000485290 CYB5RLQ6IPT4 315 aa13.8□□□□□ -0.2
FBXO18-213ENST00000485290 CEP164Q9UPV0 1460 aa13.79□□□□□ -0.2
FBXO18-213ENST00000485290 ARAP1Q96P48 1450 aa13.74□□□□□ -0.21
FBXO18-213ENST00000485290 FANCD2Q9BXW9 1451 aa13.72□□□□□ -0.21
FBXO18-213ENST00000485290 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
FBXO18-213ENST00000485290 URB2Q14146 1524 aaKnown RBP13.68□□□□□ -0.22
FBXO18-213ENST00000485290 POTEDQ86YR6 584 aa13.67□□□□□ -0.22
FBXO18-213ENST00000485290 ZNF608Q9ULD9 1512 aaPredicted RBP13.63□□□□□ -0.23
FBXO18-213ENST00000485290 CFTRP13569 1480 aa13.59□□□□□ -0.23
FBXO18-213ENST00000485290 RSF1Q96T23 1441 aaPredicted RBP13.58□□□□□ -0.24
FBXO18-213ENST00000485290 ILDR1Q86SU0 546 aaPredicted RBP13.57□□□□□ -0.24
FBXO18-213ENST00000485290 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
FBXO18-213ENST00000485290 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
FBXO18-213ENST00000485290 CHD1O14646 1710 aa13.47□□□□□ -0.25
FBXO18-213ENST00000485290 WIZO95785 1651 aa13.44□□□□□ -0.26
FBXO18-213ENST00000485290 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.27
FBXO18-213ENST00000485290 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
FBXO18-213ENST00000485290 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
FBXO18-213ENST00000485290 FBLN2P98095 1184 aa13.38□□□□□ -0.27
FBXO18-213ENST00000485290 TARBP1Q13395 1621 aaKnown RBP13.32□□□□□ -0.28
FBXO18-213ENST00000485290 GAPVD1Q14C86 1478 aa13.28□□□□□ -0.28
FBXO18-213ENST00000485290 PRDM2Q13029 1718 aa13.27□□□□□ -0.28
FBXO18-213ENST00000485290 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
FBXO18-213ENST00000485290 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
FBXO18-213ENST00000485290 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
FBXO18-213ENST00000485290 DNMBPQ6XZF7 1577 aa13.24□□□□□ -0.29
FBXO18-213ENST00000485290 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
FBXO18-213ENST00000485290 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
FBXO18-213ENST00000485290 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.3
FBXO18-213ENST00000485290 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
FBXO18-213ENST00000485290 CHMP7Q8WUX9 453 aaPredicted RBP13.17□□□□□ -0.3
FBXO18-213ENST00000485290 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
FBXO18-213ENST00000485290 MAGI1Q96QZ7 1491 aaPredicted RBP13.16□□□□□ -0.3
FBXO18-213ENST00000485290 ERCC6L2Q5T890 1561 aa13.13□□□□□ -0.31
FBXO18-213ENST00000485290 SYNJ2O15056 1496 aa13.13□□□□□ -0.31
FBXO18-213ENST00000485290 KIF13AQ9H1H9 1805 aa13.13□□□□□ -0.31
FBXO18-213ENST00000485290 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
FBXO18-213ENST00000485290 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
FBXO18-213ENST00000485290 SOGA1O94964 1423 aa13.1□□□□□ -0.31
FBXO18-213ENST00000485290 GRIN2BQ13224 1484 aa13.08□□□□□ -0.32
FBXO18-213ENST00000485290 ABCC10Q5T3U5 1492 aa13.02□□□□□ -0.33
FBXO18-213ENST00000485290 FGD5Q6ZNL6 1462 aa13.01□□□□□ -0.33
FBXO18-213ENST00000485290 HECW2Q9P2P5 1572 aa13.01□□□□□ -0.33
FBXO18-213ENST00000485290 KDM6BO15054 1643 aa13□□□□□ -0.33
FBXO18-213ENST00000485290 CEP170Q5SW79 1584 aa13□□□□□ -0.33
FBXO18-213ENST00000485290 FAM69CQ0P6D2 419 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms