RNA–Protein interactions for RNA: ENST00000485112.1

CLASP1-213, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5

Gene CLASP1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-213ENST00000485112 NISCHQ9Y2I1 1504 aa54.84■■■■■ 6.37
CLASP1-213ENST00000485112 CCDC180Q9P1Z9 1646 aa48.62■■■■■ 5.37
CLASP1-213ENST00000485112 ABCC9O60706 1549 aa47.38■■■■■ 5.18
CLASP1-213ENST00000485112 DCAF8L2P0C7V8 631 aa45.77■■■■■ 4.92
CLASP1-213ENST00000485112 NACADO15069 1562 aa45.73■■■■■ 4.91
CLASP1-213ENST00000485112 ZCCHC6Q5VYS8 1495 aaKnown RBP45.72■■■■■ 4.91
CLASP1-213ENST00000485112 RB1CC1Q8TDY2 1594 aa45.71■■■■■ 4.91
CLASP1-213ENST00000485112 MYO15BQ96JP2 1530 aa45.57■■■■■ 4.88
CLASP1-213ENST00000485112 DCAF1Q9Y4B6 1507 aa45.42■■■■■ 4.86
CLASP1-213ENST00000485112 UNC13AQ9UPW8 1703 aa44.49■■■■■ 4.71
CLASP1-213ENST00000485112 SCRIBQ14160 1630 aa44.35■■■■■ 4.69
CLASP1-213ENST00000485112 PABPN1Q86U42 306 aaKnown RBP eCLIP44.34■■■■■ 4.69
CLASP1-213ENST00000485112 BICRAQ9NZM4 1560 aa44.23■■■■■ 4.67
CLASP1-213ENST00000485112 SHROOM4Q9ULL8 1493 aa43.95■■■■■ 4.63
CLASP1-213ENST00000485112 DNAJC5BQ9UF47 199 aa43.27■■■■■ 4.52
CLASP1-213ENST00000485112 EIF4G1Q04637 1599 aaKnown RBP43.1■■■■■ 4.49
CLASP1-213ENST00000485112 CC2D2AQ9P2K1 1620 aa42.85■■■■■ 4.45
CLASP1-213ENST00000485112 CECR2Q9BXF3 1484 aa42.65■■■■■ 4.42
CLASP1-213ENST00000485112 BAZ1AQ9NRL2 1556 aaPredicted RBP42.51■■■■■ 4.4
CLASP1-213ENST00000485112 SMARCA4P51532 1647 aa42.46■■■■■ 4.39
CLASP1-213ENST00000485112 ATAD2BQ9ULI0 1458 aa42.23■■■■■ 4.35
CLASP1-213ENST00000485112 MROH2BQ7Z745 1585 aa42.22■■■■■ 4.35
CLASP1-213ENST00000485112 SMARCA2P51531 1590 aa42.22■■■■■ 4.35
CLASP1-213ENST00000485112 NCAPD3P42695 1498 aa42.21■■■■■ 4.35
CLASP1-213ENST00000485112 PEG3Q9GZU2 1588 aa42.08■■■■■ 4.33
CLASP1-213ENST00000485112 HMGXB3Q12766 1538 aa41.99■■■■■ 4.31
CLASP1-213ENST00000485112 BAZ1BQ9UIG0 1483 aaKnown RBP41.91■■■■■ 4.3
CLASP1-213ENST00000485112 RSF1Q96T23 1441 aaPredicted RBP41.86■■■■■ 4.29
CLASP1-213ENST00000485112 WIZO95785 1651 aa41.73■■■■■ 4.27
CLASP1-213ENST00000485112 TOP2AP11388 1531 aaKnown RBP41.39■■■■■ 4.22
CLASP1-213ENST00000485112 LAMC3Q9Y6N6 1575 aa41.03■■■■■ 4.16
CLASP1-213ENST00000485112 NESP48681 1621 aa41.03■■■■■ 4.16
CLASP1-213ENST00000485112 CADPSQ9ULU8 1353 aa41■■■■■ 4.15
CLASP1-213ENST00000485112 SUPT5HO00267 1087 aaKnown RBP40.97■■■■■ 4.15
CLASP1-213ENST00000485112 CCDC88BA6NC98 1476 aa40.9■■■■■ 4.14
CLASP1-213ENST00000485112 ERCC6Q03468 1493 aa40.89■■■■■ 4.14
CLASP1-213ENST00000485112 PDS5BQ9NTI5 1447 aa40.82■■■■■ 4.12
CLASP1-213ENST00000485112 CFTRP13569 1480 aa40.78■■■■■ 4.12
CLASP1-213ENST00000485112 FANCD2Q9BXW9 1451 aa40.5■■■■■ 4.07
CLASP1-213ENST00000485112 KIF21AQ7Z4S6 1674 aa40.5■■■■■ 4.07
CLASP1-213ENST00000485112 CEP164Q9UPV0 1460 aa40.44■■■■■ 4.06
CLASP1-213ENST00000485112 CUX2O14529 1486 aa40.39■■■■■ 4.06
CLASP1-213ENST00000485112 THOC2Q8NI27 1593 aaKnown RBP40.35■■■■■ 4.05
CLASP1-213ENST00000485112 PRDM2Q13029 1718 aa40.35■■■■■ 4.05
CLASP1-213ENST00000485112 MRC2Q9UBG0 1479 aa40.33■■■■■ 4.05
CLASP1-213ENST00000485112 WDR62O43379 1518 aa40.16■■■■■ 4.02
CLASP1-213ENST00000485112 URB2Q14146 1524 aaKnown RBP40.03■■■■■ 4
CLASP1-213ENST00000485112 ABCC8Q09428 1581 aa39.96■■■■□ 3.99
CLASP1-213ENST00000485112 TOPBP1Q92547 1522 aa39.86■■■■□ 3.97
CLASP1-213ENST00000485112 DNMBPQ6XZF7 1577 aa39.83■■■■□ 3.97
CLASP1-213ENST00000485112 IFT140Q96RY7 1462 aa39.61■■■■□ 3.93
CLASP1-213ENST00000485112 CUX1P39880 1505 aa39.6■■■■□ 3.93
CLASP1-213ENST00000485112 POLA1P09884 1462 aaPredicted RBP39.53■■■■□ 3.92
CLASP1-213ENST00000485112 WRNQ14191 1432 aaPredicted RBP eCLIP39.49■■■■□ 3.91
CLASP1-213ENST00000485112 FGD5Q6ZNL6 1462 aa39.46■■■■□ 3.91
CLASP1-213ENST00000485112 SOGA1O94964 1423 aa39.41■■■■□ 3.9
CLASP1-213ENST00000485112 TARBP1Q13395 1621 aaKnown RBP39.36■■■■□ 3.89
CLASP1-213ENST00000485112 TOP2BQ02880 1626 aa39.33■■■■□ 3.89
CLASP1-213ENST00000485112 RAD54L2Q9Y4B4 1467 aa39.33■■■■□ 3.89
CLASP1-213ENST00000485112 ZNF608Q9ULD9 1512 aaPredicted RBP39.32■■■■□ 3.89
CLASP1-213ENST00000485112 BIVM-ERCC5R4GMW8 1640 aa39.3■■■■□ 3.88
CLASP1-213ENST00000485112 SYNJ1O43426 1573 aa39.29■■■■□ 3.88
CLASP1-213ENST00000485112 AQRO60306 1485 aaKnown RBP eCLIP39.16■■■■□ 3.863e-10■■■■■ 64.9
CLASP1-213ENST00000485112 EIF4G3O43432 1585 aaKnown RBP39.16■■■■□ 3.86
CLASP1-213ENST00000485112 WDR97A6NE52 1622 aa39.15■■■■□ 3.86
CLASP1-213ENST00000485112 TDRD9Q8NDG6 1382 aaKnown RBP39.14■■■■□ 3.86
CLASP1-213ENST00000485112 ABCA10Q8WWZ4 1543 aa39.12■■■■□ 3.85
CLASP1-213ENST00000485112 GAPVD1Q14C86 1478 aa38.95■■■■□ 3.83
CLASP1-213ENST00000485112 GRIN2BQ13224 1484 aa38.93■■■■□ 3.82
CLASP1-213ENST00000485112 DNAJC5Q9H3Z4 198 aa38.91■■■■□ 3.82
CLASP1-213ENST00000485112 ABCA5Q8WWZ7 1642 aa38.88■■■■□ 3.81
CLASP1-213ENST00000485112 SNAPC4Q5SXM2 1469 aa38.81■■■■□ 3.8
CLASP1-213ENST00000485112 MAGI1Q96QZ7 1491 aaPredicted RBP38.81■■■■□ 3.8
CLASP1-213ENST00000485112 OSCARQ8IYS5 282 aa38.8■■■■□ 3.8
CLASP1-213ENST00000485112 TRIM41Q8WV44 630 aa38.75■■■■□ 3.79
CLASP1-213ENST00000485112 PBRM1Q86U86 1689 aa38.74■■■■□ 3.79
CLASP1-213ENST00000485112 FBLN2P98095 1184 aa38.7■■■■□ 3.79
CLASP1-213ENST00000485112 KIF27Q86VH2 1401 aa38.69■■■■□ 3.78
CLASP1-213ENST00000485112 CHMP7Q8WUX9 453 aaPredicted RBP38.67■■■■□ 3.78
CLASP1-213ENST00000485112 ERICH3Q5RHP9 1530 aa38.66■■■■□ 3.78
CLASP1-213ENST00000485112 SYNJ2O15056 1496 aa38.65■■■■□ 3.78
CLASP1-213ENST00000485112 CHD1O14646 1710 aa38.57■■■■□ 3.76
CLASP1-213ENST00000485112 FHAD1B1AJZ9 1412 aa38.54■■■■□ 3.76
CLASP1-213ENST00000485112 ADAMTS12P58397 1594 aa38.51■■■■□ 3.76
CLASP1-213ENST00000485112 IGF1RP08069 1367 aa38.47■■■■□ 3.75
CLASP1-213ENST00000485112 GRIN2AQ12879 1464 aa38.41■■■■□ 3.74
CLASP1-213ENST00000485112 CHIC1Q5VXU3 224 aa38.37■■■■□ 3.73
CLASP1-213ENST00000485112 CUL7Q14999 1698 aa38.32■■■■□ 3.72
CLASP1-213ENST00000485112 RUSC2Q8N2Y8 1516 aa38.28■■■■□ 3.72
CLASP1-213ENST00000485112 CARMIL1Q5VZK9 1371 aa38.27■■■■□ 3.72
CLASP1-213ENST00000485112 CLASP1Q7Z460 1538 aa38.24■■■■□ 3.71
CLASP1-213ENST00000485112 NUP160Q12769 1436 aa38.24■■■■□ 3.71
CLASP1-213ENST00000485112 CEP170Q5SW79 1584 aa38.14■■■■□ 3.7
CLASP1-213ENST00000485112 EEA1Q15075 1411 aa38.12■■■■□ 3.69
CLASP1-213ENST00000485112 ARHGEF11O15085 1522 aa38.07■■■■□ 3.68
CLASP1-213ENST00000485112 RAPGEF2Q9Y4G8 1499 aa38.06■■■■□ 3.68
CLASP1-213ENST00000485112 CSRNP3Q8WYN3 585 aa38.02■■■■□ 3.68
CLASP1-213ENST00000485112 RIMBP3CA6NJZ7 1639 aa38.01■■■■□ 3.67
CLASP1-213ENST00000485112 RIMBP3BA6NNM3 1639 aa38.01■■■■□ 3.67
CLASP1-213ENST00000485112 RIMBP3Q9UFD9 1639 aa38.01■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms