RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 NISCHQ9Y2I1 1504 aa40.39■■■■■ 4.06
CCDC78-214ENST00000485091 CCDC180Q9P1Z9 1646 aa35.37■■■■□ 3.25
CCDC78-214ENST00000485091 ABCC9O60706 1549 aa33.96■■■■□ 3.03
CCDC78-214ENST00000485091 ZCCHC6Q5VYS8 1495 aaKnown RBP33.82■■■■□ 3.01
CCDC78-214ENST00000485091 DCAF8L2P0C7V8 631 aa33.68■■■□□ 2.98
CCDC78-214ENST00000485091 DCAF1Q9Y4B6 1507 aa33.32■■■□□ 2.92
CCDC78-214ENST00000485091 MYO15BQ96JP2 1530 aa33.07■■■□□ 2.88
CCDC78-214ENST00000485091 NACADO15069 1562 aa33.06■■■□□ 2.88
CCDC78-214ENST00000485091 RB1CC1Q8TDY2 1594 aa32.91■■■□□ 2.86
CCDC78-214ENST00000485091 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
CCDC78-214ENST00000485091 SCRIBQ14160 1630 aa32.57■■■□□ 2.81
CCDC78-214ENST00000485091 UNC13AQ9UPW8 1703 aa32.22■■■□□ 2.75
CCDC78-214ENST00000485091 PABPN1Q86U42 306 aaKnown RBP eCLIP31.98■■■□□ 2.71
CCDC78-214ENST00000485091 BICRAQ9NZM4 1560 aa31.91■■■□□ 2.7
CCDC78-214ENST00000485091 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
CCDC78-214ENST00000485091 SUPT5HO00267 1087 aaKnown RBP31.35■■■□□ 2.61
CCDC78-214ENST00000485091 DNAJC5BQ9UF47 199 aa31.23■■■□□ 2.59
CCDC78-214ENST00000485091 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
CCDC78-214ENST00000485091 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
CCDC78-214ENST00000485091 RSF1Q96T23 1441 aaPredicted RBP31.18■■■□□ 2.58
CCDC78-214ENST00000485091 SMARCA4P51532 1647 aa31.14■■■□□ 2.58
CCDC78-214ENST00000485091 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
CCDC78-214ENST00000485091 WIZO95785 1651 aa30.96■■■□□ 2.55
CCDC78-214ENST00000485091 ATAD2BQ9ULI0 1458 aa30.74■■■□□ 2.51
CCDC78-214ENST00000485091 PEG3Q9GZU2 1588 aa30.72■■■□□ 2.51
CCDC78-214ENST00000485091 SMARCA2P51531 1590 aa30.7■■■□□ 2.5
CCDC78-214ENST00000485091 CC2D2AQ9P2K1 1620 aa30.67■■■□□ 2.5
CCDC78-214ENST00000485091 TOP2AP11388 1531 aaKnown RBP30.58■■■□□ 2.49
CCDC78-214ENST00000485091 BAZ1BQ9UIG0 1483 aaKnown RBP30.57■■■□□ 2.48
CCDC78-214ENST00000485091 NCAPD3P42695 1498 aa30.52■■■□□ 2.48
CCDC78-214ENST00000485091 HMGXB3Q12766 1538 aa30.43■■■□□ 2.46
CCDC78-214ENST00000485091 CCDC88BA6NC98 1476 aa30.3■■■□□ 2.44
CCDC78-214ENST00000485091 CADPSQ9ULU8 1353 aa29.75■■■□□ 2.35
CCDC78-214ENST00000485091 CFTRP13569 1480 aa29.74■■■□□ 2.35
CCDC78-214ENST00000485091 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
CCDC78-214ENST00000485091 NESP48681 1621 aa29.66■■■□□ 2.34
CCDC78-214ENST00000485091 LAMC3Q9Y6N6 1575 aa29.56■■■□□ 2.32
CCDC78-214ENST00000485091 ABCC8Q09428 1581 aa29.55■■■□□ 2.32
CCDC78-214ENST00000485091 PRDM2Q13029 1718 aa29.53■■■□□ 2.32
CCDC78-214ENST00000485091 TRIM41Q8WV44 630 aa29.46■■■□□ 2.31
CCDC78-214ENST00000485091 FANCD2Q9BXW9 1451 aa29.43■■■□□ 2.3
CCDC78-214ENST00000485091 WRNQ14191 1432 aaPredicted RBP eCLIP29.38■■■□□ 2.29
CCDC78-214ENST00000485091 PDS5BQ9NTI5 1447 aa29.38■■■□□ 2.29
CCDC78-214ENST00000485091 CEP164Q9UPV0 1460 aa29.28■■■□□ 2.28
CCDC78-214ENST00000485091 KIF21AQ7Z4S6 1674 aa29.27■■■□□ 2.28
CCDC78-214ENST00000485091 SYNJ1O43426 1573 aa29.27■■■□□ 2.28
CCDC78-214ENST00000485091 ERCC6Q03468 1493 aa29.26■■■□□ 2.27
CCDC78-214ENST00000485091 CUX1P39880 1505 aa29.2■■■□□ 2.27
CCDC78-214ENST00000485091 TOP2BQ02880 1626 aa29.16■■■□□ 2.26
CCDC78-214ENST00000485091 BIVM-ERCC5R4GMW8 1640 aa29.12■■■□□ 2.25
CCDC78-214ENST00000485091 URB2Q14146 1524 aaKnown RBP29.08■■■□□ 2.24
CCDC78-214ENST00000485091 DNMBPQ6XZF7 1577 aa29.06■■■□□ 2.24
CCDC78-214ENST00000485091 TOPBP1Q92547 1522 aa29.05■■■□□ 2.24
CCDC78-214ENST00000485091 MRC2Q9UBG0 1479 aa29.02■■■□□ 2.24
CCDC78-214ENST00000485091 FAM9AQ8IZU1 332 aaPredicted RBP28.99■■■□□ 2.23
CCDC78-214ENST00000485091 FGD5Q6ZNL6 1462 aa28.97■■■□□ 2.23
CCDC78-214ENST00000485091 CUX2O14529 1486 aa28.94■■■□□ 2.22
CCDC78-214ENST00000485091 SOGA1O94964 1423 aa28.91■■■□□ 2.22
CCDC78-214ENST00000485091 POLA1P09884 1462 aaPredicted RBP28.89■■■□□ 2.21
CCDC78-214ENST00000485091 THOC2Q8NI27 1593 aaKnown RBP28.88■■■□□ 2.21
CCDC78-214ENST00000485091 WDR62O43379 1518 aa28.86■■■□□ 2.21
CCDC78-214ENST00000485091 RUSC2Q8N2Y8 1516 aa28.84■■■□□ 2.21
CCDC78-214ENST00000485091 RAD54L2Q9Y4B4 1467 aa28.83■■■□□ 2.21
CCDC78-214ENST00000485091 EEA1Q15075 1411 aa28.69■■■□□ 2.18
CCDC78-214ENST00000485091 KIF27Q86VH2 1401 aa28.68■■■□□ 2.18
CCDC78-214ENST00000485091 ABCA10Q8WWZ4 1543 aa28.67■■■□□ 2.18
CCDC78-214ENST00000485091 CSRNP3Q8WYN3 585 aa28.66■■■□□ 2.18
CCDC78-214ENST00000485091 EHMT2Q96KQ7 1210 aa28.66■■■□□ 2.18
CCDC78-214ENST00000485091 LOC105371045A0A1W2PR82 267 aa28.63■■■□□ 2.17
CCDC78-214ENST00000485091 TARBP1Q13395 1621 aaKnown RBP28.63■■■□□ 2.17
CCDC78-214ENST00000485091 WDR97A6NE52 1622 aa28.6■■■□□ 2.17
CCDC78-214ENST00000485091 TDRD9Q8NDG6 1382 aaKnown RBP28.59■■■□□ 2.17
CCDC78-214ENST00000485091 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
CCDC78-214ENST00000485091 ZNF608Q9ULD9 1512 aaPredicted RBP28.49■■■□□ 2.15
CCDC78-214ENST00000485091 AQRO60306 1485 aaKnown RBP eCLIP28.48■■■□□ 2.15
CCDC78-214ENST00000485091 GAPVD1Q14C86 1478 aa28.47■■■□□ 2.15
CCDC78-214ENST00000485091 IGF1RP08069 1367 aa28.46■■■□□ 2.15
CCDC78-214ENST00000485091 ABCA5Q8WWZ7 1642 aa28.46■■■□□ 2.15
CCDC78-214ENST00000485091 EIF4G3O43432 1585 aaKnown RBP28.36■■■□□ 2.13
CCDC78-214ENST00000485091 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
CCDC78-214ENST00000485091 KIF21BO75037 1637 aa28.34■■■□□ 2.13
CCDC78-214ENST00000485091 PBRM1Q86U86 1689 aa28.33■■■□□ 2.13
CCDC78-214ENST00000485091 CARMIL1Q5VZK9 1371 aa28.33■■■□□ 2.13
CCDC78-214ENST00000485091 RAPGEF2Q9Y4G8 1499 aa28.32■■■□□ 2.12
CCDC78-214ENST00000485091 GOLGA3Q08378 1498 aa28.32■■■□□ 2.12
CCDC78-214ENST00000485091 ERICH3Q5RHP9 1530 aa28.32■■■□□ 2.12
CCDC78-214ENST00000485091 UBTFP17480 764 aaKnown RBP28.31■■■□□ 2.12
CCDC78-214ENST00000485091 GRIN2BQ13224 1484 aa28.3■■■□□ 2.12
CCDC78-214ENST00000485091 CUL7Q14999 1698 aa28.25■■■□□ 2.11
CCDC78-214ENST00000485091 DNAJC5Q9H3Z4 198 aa28.2■■■□□ 2.1
CCDC78-214ENST00000485091 SNAPC4Q5SXM2 1469 aa28.2■■■□□ 2.1
CCDC78-214ENST00000485091 ADAMTS12P58397 1594 aa28.14■■■□□ 2.1
CCDC78-214ENST00000485091 FHAD1B1AJZ9 1412 aa28.14■■■□□ 2.1
CCDC78-214ENST00000485091 TNIKQ9UKE5 1360 aa28.13■■■□□ 2.09
CCDC78-214ENST00000485091 MAGI1Q96QZ7 1491 aaPredicted RBP28.09■■■□□ 2.09
CCDC78-214ENST00000485091 RANGAP1P46060 587 aaPredicted RBP28.06■■■□□ 2.08
CCDC78-214ENST00000485091 FBLN2P98095 1184 aa28.06■■■□□ 2.08
CCDC78-214ENST00000485091 CHMP7Q8WUX9 453 aaPredicted RBP28.04■■■□□ 2.08
CCDC78-214ENST00000485091 SYNJ2O15056 1496 aa28■■■□□ 2.07
CCDC78-214ENST00000485091 CEP162Q5TB80 1403 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms