RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 NISCHQ9Y2I1 1504 aa43.62■■■■■ 4.57
CNKSR1-208ENST00000484874 CCDC180Q9P1Z9 1646 aa38.65■■■■□ 3.78
CNKSR1-208ENST00000484874 ABCC9O60706 1549 aa37.66■■■■□ 3.62
CNKSR1-208ENST00000484874 DCAF8L2P0C7V8 631 aa36.39■■■■□ 3.42
CNKSR1-208ENST00000484874 NACADO15069 1562 aa36.38■■■■□ 3.41
CNKSR1-208ENST00000484874 RB1CC1Q8TDY2 1594 aa36.34■■■■□ 3.41
CNKSR1-208ENST00000484874 ZCCHC6Q5VYS8 1495 aaKnown RBP36.33■■■■□ 3.41
CNKSR1-208ENST00000484874 MYO15BQ96JP2 1530 aa36.27■■■■□ 3.4
CNKSR1-208ENST00000484874 DCAF1Q9Y4B6 1507 aa36.15■■■■□ 3.38
CNKSR1-208ENST00000484874 UNC13AQ9UPW8 1703 aa35.42■■■■□ 3.26
CNKSR1-208ENST00000484874 PABPN1Q86U42 306 aaKnown RBP eCLIP35.27■■■■□ 3.24
CNKSR1-208ENST00000484874 BICRAQ9NZM4 1560 aa35.22■■■■□ 3.23
CNKSR1-208ENST00000484874 SCRIBQ14160 1630 aa35.2■■■■□ 3.23
CNKSR1-208ENST00000484874 SHROOM4Q9ULL8 1493 aa34.94■■■■□ 3.18
CNKSR1-208ENST00000484874 DNAJC5BQ9UF47 199 aa34.53■■■■□ 3.12
CNKSR1-208ENST00000484874 EIF4G1Q04637 1599 aaKnown RBP34.27■■■■□ 3.08
CNKSR1-208ENST00000484874 CC2D2AQ9P2K1 1620 aa34.08■■■■□ 3.05
CNKSR1-208ENST00000484874 CECR2Q9BXF3 1484 aa33.94■■■■□ 3.02
CNKSR1-208ENST00000484874 BAZ1AQ9NRL2 1556 aaPredicted RBP33.77■■■■□ 3
CNKSR1-208ENST00000484874 SMARCA4P51532 1647 aa33.75■■■□□ 2.99
CNKSR1-208ENST00000484874 NCAPD3P42695 1498 aa33.62■■■□□ 2.97
CNKSR1-208ENST00000484874 ATAD2BQ9ULI0 1458 aa33.6■■■□□ 2.97
CNKSR1-208ENST00000484874 MROH2BQ7Z745 1585 aa33.58■■■□□ 2.97
CNKSR1-208ENST00000484874 SMARCA2P51531 1590 aa33.55■■■□□ 2.96
CNKSR1-208ENST00000484874 PEG3Q9GZU2 1588 aa33.49■■■□□ 2.95
CNKSR1-208ENST00000484874 HMGXB3Q12766 1538 aa33.38■■■□□ 2.93
CNKSR1-208ENST00000484874 RSF1Q96T23 1441 aaPredicted RBP33.31■■■□□ 2.92
CNKSR1-208ENST00000484874 BAZ1BQ9UIG0 1483 aaKnown RBP33.29■■■□□ 2.92
CNKSR1-208ENST00000484874 WIZO95785 1651 aa33.19■■■□□ 2.9
CNKSR1-208ENST00000484874 TOP2AP11388 1531 aaKnown RBP32.87■■■□□ 2.85
CNKSR1-208ENST00000484874 NESP48681 1621 aa32.63■■■□□ 2.81
CNKSR1-208ENST00000484874 CADPSQ9ULU8 1353 aa32.63■■■□□ 2.81
CNKSR1-208ENST00000484874 LAMC3Q9Y6N6 1575 aa32.62■■■□□ 2.81
CNKSR1-208ENST00000484874 SUPT5HO00267 1087 aaKnown RBP32.56■■■□□ 2.8
CNKSR1-208ENST00000484874 CCDC88BA6NC98 1476 aa32.54■■■□□ 2.8
CNKSR1-208ENST00000484874 PDS5BQ9NTI5 1447 aa32.46■■■□□ 2.79
CNKSR1-208ENST00000484874 CFTRP13569 1480 aa32.45■■■□□ 2.79
CNKSR1-208ENST00000484874 ERCC6Q03468 1493 aa32.45■■■□□ 2.79
CNKSR1-208ENST00000484874 KIF21AQ7Z4S6 1674 aa32.2■■■□□ 2.74
CNKSR1-208ENST00000484874 FANCD2Q9BXW9 1451 aa32.18■■■□□ 2.74
CNKSR1-208ENST00000484874 CUX2O14529 1486 aa32.12■■■□□ 2.73
CNKSR1-208ENST00000484874 CEP164Q9UPV0 1460 aa32.12■■■□□ 2.73
CNKSR1-208ENST00000484874 PRDM2Q13029 1718 aa32.08■■■□□ 2.73
CNKSR1-208ENST00000484874 THOC2Q8NI27 1593 aaKnown RBP32.07■■■□□ 2.72
CNKSR1-208ENST00000484874 MRC2Q9UBG0 1479 aa32.04■■■□□ 2.72
CNKSR1-208ENST00000484874 WDR62O43379 1518 aa31.92■■■□□ 2.7
CNKSR1-208ENST00000484874 URB2Q14146 1524 aaKnown RBP31.84■■■□□ 2.69
CNKSR1-208ENST00000484874 ABCC8Q09428 1581 aa31.78■■■□□ 2.68
CNKSR1-208ENST00000484874 TOPBP1Q92547 1522 aa31.69■■■□□ 2.66
CNKSR1-208ENST00000484874 DNMBPQ6XZF7 1577 aa31.64■■■□□ 2.66
CNKSR1-208ENST00000484874 CUX1P39880 1505 aa31.49■■■□□ 2.63
CNKSR1-208ENST00000484874 IFT140Q96RY7 1462 aa31.47■■■□□ 2.63
CNKSR1-208ENST00000484874 POLA1P09884 1462 aaPredicted RBP31.42■■■□□ 2.62
CNKSR1-208ENST00000484874 WRNQ14191 1432 aaPredicted RBP eCLIP31.38■■■□□ 2.61
CNKSR1-208ENST00000484874 SOGA1O94964 1423 aa31.36■■■□□ 2.61
CNKSR1-208ENST00000484874 FGD5Q6ZNL6 1462 aa31.35■■■□□ 2.61
CNKSR1-208ENST00000484874 TARBP1Q13395 1621 aaKnown RBP31.31■■■□□ 2.6
CNKSR1-208ENST00000484874 RAD54L2Q9Y4B4 1467 aa31.27■■■□□ 2.6
CNKSR1-208ENST00000484874 ZNF608Q9ULD9 1512 aaPredicted RBP31.27■■■□□ 2.6
CNKSR1-208ENST00000484874 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
CNKSR1-208ENST00000484874 BIVM-ERCC5R4GMW8 1640 aa31.24■■■□□ 2.59
CNKSR1-208ENST00000484874 SYNJ1O43426 1573 aa31.21■■■□□ 2.59
CNKSR1-208ENST00000484874 AQRO60306 1485 aaKnown RBP eCLIP31.15■■■□□ 2.58
CNKSR1-208ENST00000484874 TDRD9Q8NDG6 1382 aaKnown RBP31.13■■■□□ 2.57
CNKSR1-208ENST00000484874 WDR97A6NE52 1622 aa31.12■■■□□ 2.57
CNKSR1-208ENST00000484874 ABCA10Q8WWZ4 1543 aa31.11■■■□□ 2.57
CNKSR1-208ENST00000484874 EIF4G3O43432 1585 aaKnown RBP31.09■■■□□ 2.57
CNKSR1-208ENST00000484874 DNAJC5Q9H3Z4 198 aa31.05■■■□□ 2.56
CNKSR1-208ENST00000484874 GAPVD1Q14C86 1478 aa30.97■■■□□ 2.55
CNKSR1-208ENST00000484874 GRIN2BQ13224 1484 aa30.95■■■□□ 2.54
CNKSR1-208ENST00000484874 OSCARQ8IYS5 282 aa30.91■■■□□ 2.54
CNKSR1-208ENST00000484874 ABCA5Q8WWZ7 1642 aa30.9■■■□□ 2.54
CNKSR1-208ENST00000484874 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
CNKSR1-208ENST00000484874 SNAPC4Q5SXM2 1469 aa30.82■■■□□ 2.52
CNKSR1-208ENST00000484874 TRIM41Q8WV44 630 aa30.8■■■□□ 2.52
CNKSR1-208ENST00000484874 PBRM1Q86U86 1689 aa30.78■■■□□ 2.52
CNKSR1-208ENST00000484874 FBLN2P98095 1184 aa30.75■■■□□ 2.51
CNKSR1-208ENST00000484874 CHMP7Q8WUX9 453 aaPredicted RBP30.75■■■□□ 2.51
CNKSR1-208ENST00000484874 KIF27Q86VH2 1401 aa30.73■■■□□ 2.51
CNKSR1-208ENST00000484874 ERICH3Q5RHP9 1530 aa30.73■■■□□ 2.51
CNKSR1-208ENST00000484874 SYNJ2O15056 1496 aa30.72■■■□□ 2.51
CNKSR1-208ENST00000484874 CHD1O14646 1710 aa30.66■■■□□ 2.5
CNKSR1-208ENST00000484874 IGF1RP08069 1367 aa30.65■■■□□ 2.5
CNKSR1-208ENST00000484874 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.49
CNKSR1-208ENST00000484874 ADAMTS12P58397 1594 aa30.57■■■□□ 2.48
CNKSR1-208ENST00000484874 CHIC1Q5VXU3 224 aa30.54■■■□□ 2.48
CNKSR1-208ENST00000484874 GRIN2AQ12879 1464 aa30.52■■■□□ 2.48
CNKSR1-208ENST00000484874 RUSC2Q8N2Y8 1516 aa30.45■■■□□ 2.47
CNKSR1-208ENST00000484874 CARMIL1Q5VZK9 1371 aa30.44■■■□□ 2.46
CNKSR1-208ENST00000484874 CUL7Q14999 1698 aa30.42■■■□□ 2.46
CNKSR1-208ENST00000484874 NUP160Q12769 1436 aa30.41■■■□□ 2.46
CNKSR1-208ENST00000484874 CLASP1Q7Z460 1538 aa30.4■■■□□ 2.46
CNKSR1-208ENST00000484874 CEP170Q5SW79 1584 aa30.32■■■□□ 2.44
CNKSR1-208ENST00000484874 EEA1Q15075 1411 aa30.28■■■□□ 2.44
CNKSR1-208ENST00000484874 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
CNKSR1-208ENST00000484874 CSRNP3Q8WYN3 585 aa30.26■■■□□ 2.43
CNKSR1-208ENST00000484874 RAPGEF2Q9Y4G8 1499 aa30.25■■■□□ 2.43
CNKSR1-208ENST00000484874 RIMBP3CA6NJZ7 1639 aa30.22■■■□□ 2.43
CNKSR1-208ENST00000484874 RIMBP3BA6NNM3 1639 aa30.22■■■□□ 2.43
CNKSR1-208ENST00000484874 RIMBP3Q9UFD9 1639 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms