RNA–Protein interactions for RNA: ENST00000484828.1

C3orf52-205, Transcript of chromosome 3 open reading frame 52, humanhuman

APPRIS ALT2 TSL 2

Gene C3orf52, Length 965 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf52-205ENST00000484828 NISCHQ9Y2I1 1504 aa32.36■■■□□ 2.77
C3orf52-205ENST00000484828 CCDC180Q9P1Z9 1646 aa28.8■■■□□ 2.2
C3orf52-205ENST00000484828 ABCC9O60706 1549 aa28.39■■■□□ 2.14
C3orf52-205ENST00000484828 RB1CC1Q8TDY2 1594 aa27.02■■□□□ 1.92
C3orf52-205ENST00000484828 NACADO15069 1562 aa27.01■■□□□ 1.92
C3orf52-205ENST00000484828 ZCCHC6Q5VYS8 1495 aaKnown RBP26.99■■□□□ 1.91
C3orf52-205ENST00000484828 DNAJC5BQ9UF47 199 aa26.93■■□□□ 1.9
C3orf52-205ENST00000484828 MYO15BQ96JP2 1530 aa26.9■■□□□ 1.9
C3orf52-205ENST00000484828 DCAF8L2P0C7V8 631 aa26.88■■□□□ 1.89
C3orf52-205ENST00000484828 DCAF1Q9Y4B6 1507 aa26.82■■□□□ 1.88
C3orf52-205ENST00000484828 UNC13AQ9UPW8 1703 aa26.46■■□□□ 1.83
C3orf52-205ENST00000484828 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.82
C3orf52-205ENST00000484828 SCRIBQ14160 1630 aa26.21■■□□□ 1.79
C3orf52-205ENST00000484828 BICRAQ9NZM4 1560 aa26.21■■□□□ 1.79
C3orf52-205ENST00000484828 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
C3orf52-205ENST00000484828 CECR2Q9BXF3 1484 aa25.61■■□□□ 1.69
C3orf52-205ENST00000484828 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
C3orf52-205ENST00000484828 EIF4G1Q04637 1599 aaKnown RBP25.49■■□□□ 1.67
C3orf52-205ENST00000484828 SMARCA4P51532 1647 aa25.11■■□□□ 1.61
C3orf52-205ENST00000484828 BAZ1AQ9NRL2 1556 aaPredicted RBP25.08■■□□□ 1.61
C3orf52-205ENST00000484828 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
C3orf52-205ENST00000484828 DNAJC5Q9H3Z4 198 aa24.93■■□□□ 1.58
C3orf52-205ENST00000484828 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
C3orf52-205ENST00000484828 ATAD2BQ9ULI0 1458 aa24.92■■□□□ 1.58
C3orf52-205ENST00000484828 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
C3orf52-205ENST00000484828 PEG3Q9GZU2 1588 aa24.88■■□□□ 1.57
C3orf52-205ENST00000484828 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
C3orf52-205ENST00000484828 BAZ1BQ9UIG0 1483 aaKnown RBP24.71■■□□□ 1.55
C3orf52-205ENST00000484828 WIZO95785 1651 aa24.68■■□□□ 1.54
C3orf52-205ENST00000484828 RSF1Q96T23 1441 aaPredicted RBP24.67■■□□□ 1.54
C3orf52-205ENST00000484828 CUX2O14529 1486 aa24.58■■□□□ 1.52
C3orf52-205ENST00000484828 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
C3orf52-205ENST00000484828 TOP2AP11388 1531 aaKnown RBP24.43■■□□□ 1.5
C3orf52-205ENST00000484828 NESP48681 1621 aa24.31■■□□□ 1.48
C3orf52-205ENST00000484828 LAMC3Q9Y6N6 1575 aa24.26■■□□□ 1.47
C3orf52-205ENST00000484828 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
C3orf52-205ENST00000484828 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
C3orf52-205ENST00000484828 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.44
C3orf52-205ENST00000484828 CFTRP13569 1480 aa24.07■■□□□ 1.44
C3orf52-205ENST00000484828 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
C3orf52-205ENST00000484828 KIF21AQ7Z4S6 1674 aa24.03■■□□□ 1.44
C3orf52-205ENST00000484828 SUPT5HO00267 1087 aaKnown RBP24.03■■□□□ 1.44
C3orf52-205ENST00000484828 PRDM2Q13029 1718 aa23.97■■□□□ 1.43
C3orf52-205ENST00000484828 FANCD2Q9BXW9 1451 aa23.89■■□□□ 1.42
C3orf52-205ENST00000484828 CEP164Q9UPV0 1460 aa23.86■■□□□ 1.41
C3orf52-205ENST00000484828 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
C3orf52-205ENST00000484828 WDR62O43379 1518 aa23.75■■□□□ 1.39
C3orf52-205ENST00000484828 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
C3orf52-205ENST00000484828 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
C3orf52-205ENST00000484828 ABCC8Q09428 1581 aa23.55■■□□□ 1.36
C3orf52-205ENST00000484828 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
C3orf52-205ENST00000484828 DNMBPQ6XZF7 1577 aa23.53■■□□□ 1.36
C3orf52-205ENST00000484828 OSCARQ8IYS5 282 aa23.45■■□□□ 1.34
C3orf52-205ENST00000484828 CUX1P39880 1505 aa23.39■■□□□ 1.34
C3orf52-205ENST00000484828 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
C3orf52-205ENST00000484828 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
C3orf52-205ENST00000484828 TARBP1Q13395 1621 aaKnown RBP23.3■■□□□ 1.32
C3orf52-205ENST00000484828 FGD5Q6ZNL6 1462 aa23.29■■□□□ 1.32
C3orf52-205ENST00000484828 BIVM-ERCC5R4GMW8 1640 aa23.25■■□□□ 1.31
C3orf52-205ENST00000484828 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
C3orf52-205ENST00000484828 ZNF608Q9ULD9 1512 aaPredicted RBP23.23■■□□□ 1.31
C3orf52-205ENST00000484828 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
C3orf52-205ENST00000484828 SOGA1O94964 1423 aa23.22■■□□□ 1.31
C3orf52-205ENST00000484828 RAD54L2Q9Y4B4 1467 aa23.21■■□□□ 1.31
C3orf52-205ENST00000484828 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
C3orf52-205ENST00000484828 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
C3orf52-205ENST00000484828 WDR97A6NE52 1622 aa23.15■■□□□ 1.3
C3orf52-205ENST00000484828 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
C3orf52-205ENST00000484828 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
C3orf52-205ENST00000484828 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
C3orf52-205ENST00000484828 AQRO60306 1485 aaKnown RBP eCLIP23.1■■□□□ 1.29
C3orf52-205ENST00000484828 ABCA10Q8WWZ4 1543 aa23.08■■□□□ 1.29
C3orf52-205ENST00000484828 TDRD9Q8NDG6 1382 aaKnown RBP23.06■■□□□ 1.28
C3orf52-205ENST00000484828 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
C3orf52-205ENST00000484828 ABCA5Q8WWZ7 1642 aa23■■□□□ 1.27
C3orf52-205ENST00000484828 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
C3orf52-205ENST00000484828 PBRM1Q86U86 1689 aa22.97■■□□□ 1.27
C3orf52-205ENST00000484828 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
C3orf52-205ENST00000484828 AEBP2Q6ZN18 517 aaPredicted RBP22.95■■□□□ 1.26
C3orf52-205ENST00000484828 CYB5RLQ6IPT4 315 aa22.93■■□□□ 1.26
C3orf52-205ENST00000484828 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
C3orf52-205ENST00000484828 MAGI1Q96QZ7 1491 aaPredicted RBP22.91■■□□□ 1.26
C3orf52-205ENST00000484828 CHD1O14646 1710 aa22.89■■□□□ 1.26
C3orf52-205ENST00000484828 FBLN2P98095 1184 aa22.85■■□□□ 1.25
C3orf52-205ENST00000484828 ERICH3Q5RHP9 1530 aa22.82■■□□□ 1.24
C3orf52-205ENST00000484828 SYNJ2O15056 1496 aa22.8■■□□□ 1.24
C3orf52-205ENST00000484828 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
C3orf52-205ENST00000484828 ADAMTS12P58397 1594 aa22.76■■□□□ 1.23
C3orf52-205ENST00000484828 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
C3orf52-205ENST00000484828 TRHP20396 242 aaPredicted RBP22.75■■□□□ 1.23
C3orf52-205ENST00000484828 CHMP7Q8WUX9 453 aaPredicted RBP22.74■■□□□ 1.23
C3orf52-205ENST00000484828 FHAD1B1AJZ9 1412 aa22.71■■□□□ 1.23
C3orf52-205ENST00000484828 GRIN2AQ12879 1464 aa22.66■■□□□ 1.22
C3orf52-205ENST00000484828 IGF1RP08069 1367 aa22.65■■□□□ 1.22
C3orf52-205ENST00000484828 CUL7Q14999 1698 aa22.65■■□□□ 1.22
C3orf52-205ENST00000484828 CLASP1Q7Z460 1538 aa22.64■■□□□ 1.21
C3orf52-205ENST00000484828 NUP160Q12769 1436 aa22.57■■□□□ 1.2
C3orf52-205ENST00000484828 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
C3orf52-205ENST00000484828 CEP170Q5SW79 1584 aa22.56■■□□□ 1.2
C3orf52-205ENST00000484828 CARMIL1Q5VZK9 1371 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms