RNA–Protein interactions for RNA: ENST00000484772.1

NUDC-204, Transcript of nuclear distribution C, dynein complex regulator, humanhuman

TSL 2

Gene NUDC, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDC-204ENST00000484772 NISCHQ9Y2I1 1504 aa30.51■■■□□ 2.47
NUDC-204ENST00000484772 CCDC180Q9P1Z9 1646 aa27.01■■□□□ 1.92
NUDC-204ENST00000484772 ABCC9O60706 1549 aa26.48■■□□□ 1.83
NUDC-204ENST00000484772 NACADO15069 1562 aa25.52■■□□□ 1.68
NUDC-204ENST00000484772 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
NUDC-204ENST00000484772 RB1CC1Q8TDY2 1594 aa25.5■■□□□ 1.67
NUDC-204ENST00000484772 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
NUDC-204ENST00000484772 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.65
NUDC-204ENST00000484772 DCAF1Q9Y4B6 1507 aa25.32■■□□□ 1.64
NUDC-204ENST00000484772 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
NUDC-204ENST00000484772 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
NUDC-204ENST00000484772 UNC13AQ9UPW8 1703 aa24.65■■□□□ 1.54
NUDC-204ENST00000484772 SHROOM4Q9ULL8 1493 aa24.6■■□□□ 1.53
NUDC-204ENST00000484772 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
NUDC-204ENST00000484772 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
NUDC-204ENST00000484772 EIF4G1Q04637 1599 aaKnown RBP24.05■■□□□ 1.44
NUDC-204ENST00000484772 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
NUDC-204ENST00000484772 CECR2Q9BXF3 1484 aa23.85■■□□□ 1.41
NUDC-204ENST00000484772 BAZ1AQ9NRL2 1556 aaPredicted RBP23.64■■□□□ 1.37
NUDC-204ENST00000484772 NCAPD3P42695 1498 aa23.62■■□□□ 1.37
NUDC-204ENST00000484772 SMARCA4P51532 1647 aa23.58■■□□□ 1.36
NUDC-204ENST00000484772 ATAD2BQ9ULI0 1458 aa23.57■■□□□ 1.36
NUDC-204ENST00000484772 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
NUDC-204ENST00000484772 MROH2BQ7Z745 1585 aa23.45■■□□□ 1.34
NUDC-204ENST00000484772 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
NUDC-204ENST00000484772 HMGXB3Q12766 1538 aa23.41■■□□□ 1.34
NUDC-204ENST00000484772 BAZ1BQ9UIG0 1483 aaKnown RBP23.34■■□□□ 1.33
NUDC-204ENST00000484772 RSF1Q96T23 1441 aaPredicted RBP23.27■■□□□ 1.32
NUDC-204ENST00000484772 WIZO95785 1651 aa23.09■■□□□ 1.29
NUDC-204ENST00000484772 TOP2AP11388 1531 aaKnown RBP22.96■■□□□ 1.27
NUDC-204ENST00000484772 CADPSQ9ULU8 1353 aa22.94■■□□□ 1.26
NUDC-204ENST00000484772 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.26
NUDC-204ENST00000484772 NESP48681 1621 aa22.89■■□□□ 1.25
NUDC-204ENST00000484772 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
NUDC-204ENST00000484772 PDS5BQ9NTI5 1447 aa22.84■■□□□ 1.25
NUDC-204ENST00000484772 CFTRP13569 1480 aa22.76■■□□□ 1.23
NUDC-204ENST00000484772 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
NUDC-204ENST00000484772 CUX2O14529 1486 aa22.69■■□□□ 1.22
NUDC-204ENST00000484772 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
NUDC-204ENST00000484772 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
NUDC-204ENST00000484772 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
NUDC-204ENST00000484772 MRC2Q9UBG0 1479 aa22.53■■□□□ 1.2
NUDC-204ENST00000484772 THOC2Q8NI27 1593 aaKnown RBP22.5■■□□□ 1.19
NUDC-204ENST00000484772 KIF21AQ7Z4S6 1674 aa22.47■■□□□ 1.19
NUDC-204ENST00000484772 WDR62O43379 1518 aa22.42■■□□□ 1.18
NUDC-204ENST00000484772 URB2Q14146 1524 aaKnown RBP22.31■■□□□ 1.16
NUDC-204ENST00000484772 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
NUDC-204ENST00000484772 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
NUDC-204ENST00000484772 TOPBP1Q92547 1522 aa22.2■■□□□ 1.14
NUDC-204ENST00000484772 DNMBPQ6XZF7 1577 aa22.15■■□□□ 1.14
NUDC-204ENST00000484772 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
NUDC-204ENST00000484772 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
NUDC-204ENST00000484772 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
NUDC-204ENST00000484772 SOGA1O94964 1423 aa21.99■■□□□ 1.11
NUDC-204ENST00000484772 CUX1P39880 1505 aa21.99■■□□□ 1.11
NUDC-204ENST00000484772 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
NUDC-204ENST00000484772 FGD5Q6ZNL6 1462 aa21.94■■□□□ 1.1
NUDC-204ENST00000484772 ZNF608Q9ULD9 1512 aaPredicted RBP21.94■■□□□ 1.1
NUDC-204ENST00000484772 TARBP1Q13395 1621 aaKnown RBP21.91■■□□□ 1.1
NUDC-204ENST00000484772 RAD54L2Q9Y4B4 1467 aa21.9■■□□□ 1.1
NUDC-204ENST00000484772 AQRO60306 1485 aaKnown RBP eCLIP21.86■■□□□ 1.092e-8■■■■■ 45.7
NUDC-204ENST00000484772 TDRD9Q8NDG6 1382 aaKnown RBP21.85■■□□□ 1.09
NUDC-204ENST00000484772 OSCARQ8IYS5 282 aa21.83■■□□□ 1.09
NUDC-204ENST00000484772 WDR97A6NE52 1622 aa21.82■■□□□ 1.08
NUDC-204ENST00000484772 TOP2BQ02880 1626 aa21.8■■□□□ 1.08
NUDC-204ENST00000484772 ABCA10Q8WWZ4 1543 aa21.79■■□□□ 1.08
NUDC-204ENST00000484772 EIF4G3O43432 1585 aaKnown RBP21.77■■□□□ 1.08
NUDC-204ENST00000484772 BIVM-ERCC5R4GMW8 1640 aa21.75■■□□□ 1.07
NUDC-204ENST00000484772 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
NUDC-204ENST00000484772 GRIN2BQ13224 1484 aa21.72■■□□□ 1.07
NUDC-204ENST00000484772 GAPVD1Q14C86 1478 aa21.7■■□□□ 1.06
NUDC-204ENST00000484772 MAGI1Q96QZ7 1491 aaPredicted RBP21.66■■□□□ 1.06
NUDC-204ENST00000484772 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
NUDC-204ENST00000484772 FBLN2P98095 1184 aa21.62■■□□□ 1.05
NUDC-204ENST00000484772 SNAPC4Q5SXM2 1469 aa21.61■■□□□ 1.05
NUDC-204ENST00000484772 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.05
NUDC-204ENST00000484772 SYNJ2O15056 1496 aa21.58■■□□□ 1.04
NUDC-204ENST00000484772 ERICH3Q5RHP9 1530 aa21.52■■□□□ 1.04
NUDC-204ENST00000484772 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
NUDC-204ENST00000484772 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
NUDC-204ENST00000484772 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
NUDC-204ENST00000484772 IGF1RP08069 1367 aa21.46■■□□□ 1.03
NUDC-204ENST00000484772 PBRM1Q86U86 1689 aa21.43■■□□□ 1.02
NUDC-204ENST00000484772 GRIN2AQ12879 1464 aa21.4■■□□□ 1.02
NUDC-204ENST00000484772 CHD1O14646 1710 aa21.4■■□□□ 1.02
NUDC-204ENST00000484772 ADAMTS12P58397 1594 aa21.38■■□□□ 1.01
NUDC-204ENST00000484772 NUP160Q12769 1436 aa21.36■■□□□ 1.01
NUDC-204ENST00000484772 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
NUDC-204ENST00000484772 ARHGEF11O15085 1522 aa21.32■■□□□ 1
NUDC-204ENST00000484772 CARMIL1Q5VZK9 1371 aa21.31■■□□□ 1
NUDC-204ENST00000484772 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
NUDC-204ENST00000484772 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
NUDC-204ENST00000484772 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
NUDC-204ENST00000484772 CUL7Q14999 1698 aa21.23■□□□□ 0.99
NUDC-204ENST00000484772 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
NUDC-204ENST00000484772 JPH4Q96JJ6 628 aa21.21■□□□□ 0.99
NUDC-204ENST00000484772 CEP170Q5SW79 1584 aa21.21■□□□□ 0.99
NUDC-204ENST00000484772 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
NUDC-204ENST00000484772 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
NUDC-204ENST00000484772 KIAA0586Q9BVV6 1533 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms