RNA–Protein interactions for RNA: ENST00000484594.5

ERBB4-209, Transcript of erb-b2 receptor tyrosine kinase 4, humanhuman

TSL 1 (best)

Gene ERBB4, Length 2,680 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB4-209ENST00000484594 NISCHQ9Y2I1 1504 aa25.19■■□□□ 1.62
ERBB4-209ENST00000484594 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
ERBB4-209ENST00000484594 ZCCHC6Q5VYS8 1495 aaKnown RBP21.18■□□□□ 0.98
ERBB4-209ENST00000484594 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
ERBB4-209ENST00000484594 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
ERBB4-209ENST00000484594 NACADO15069 1562 aa20.7■□□□□ 0.9
ERBB4-209ENST00000484594 ABCC9O60706 1549 aa20.64■□□□□ 0.9
ERBB4-209ENST00000484594 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
ERBB4-209ENST00000484594 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
ERBB4-209ENST00000484594 SCRIBQ14160 1630 aa20.08■□□□□ 0.8
ERBB4-209ENST00000484594 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
ERBB4-209ENST00000484594 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
ERBB4-209ENST00000484594 BICRAQ9NZM4 1560 aa19.76■□□□□ 0.75
ERBB4-209ENST00000484594 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
ERBB4-209ENST00000484594 SMARCA4P51532 1647 aa19.42■□□□□ 0.7
ERBB4-209ENST00000484594 RSF1Q96T23 1441 aaPredicted RBP19.37■□□□□ 0.69
ERBB4-209ENST00000484594 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
ERBB4-209ENST00000484594 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
ERBB4-209ENST00000484594 MROH2BQ7Z745 1585 aa19.32■□□□□ 0.68
ERBB4-209ENST00000484594 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
ERBB4-209ENST00000484594 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
ERBB4-209ENST00000484594 EIF4G1Q04637 1599 aaKnown RBP19.17■□□□□ 0.66
ERBB4-209ENST00000484594 WIZO95785 1651 aa19.17■□□□□ 0.66
ERBB4-209ENST00000484594 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
ERBB4-209ENST00000484594 SUPT5HO00267 1087 aaKnown RBP19.12■□□□□ 0.65
ERBB4-209ENST00000484594 HMGXB3Q12766 1538 aa19.07■□□□□ 0.64
ERBB4-209ENST00000484594 ATAD2BQ9ULI0 1458 aa19.05■□□□□ 0.64
ERBB4-209ENST00000484594 NCAPD3P42695 1498 aa19■□□□□ 0.63
ERBB4-209ENST00000484594 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
ERBB4-209ENST00000484594 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
ERBB4-209ENST00000484594 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.59
ERBB4-209ENST00000484594 PRDM2Q13029 1718 aa18.69■□□□□ 0.58
ERBB4-209ENST00000484594 CFTRP13569 1480 aa18.51■□□□□ 0.55
ERBB4-209ENST00000484594 LAMC3Q9Y6N6 1575 aa18.46■□□□□ 0.54
ERBB4-209ENST00000484594 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
ERBB4-209ENST00000484594 CADPSQ9ULU8 1353 aa18.39■□□□□ 0.54
ERBB4-209ENST00000484594 BIVM-ERCC5R4GMW8 1640 aa18.33■□□□□ 0.52
ERBB4-209ENST00000484594 TOP2BQ02880 1626 aa18.28■□□□□ 0.52
ERBB4-209ENST00000484594 WRNQ14191 1432 aaPredicted RBP eCLIP18.26■□□□□ 0.51
ERBB4-209ENST00000484594 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
ERBB4-209ENST00000484594 PDS5BQ9NTI5 1447 aa18.19■□□□□ 0.5
ERBB4-209ENST00000484594 SYNJ1O43426 1573 aa18.19■□□□□ 0.5
ERBB4-209ENST00000484594 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
ERBB4-209ENST00000484594 FANCD2Q9BXW9 1451 aa18.18■□□□□ 0.5
ERBB4-209ENST00000484594 EEA1Q15075 1411 aa18.16■□□□□ 0.5
ERBB4-209ENST00000484594 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
ERBB4-209ENST00000484594 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
ERBB4-209ENST00000484594 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
ERBB4-209ENST00000484594 CUX1P39880 1505 aa18.12■□□□□ 0.49
ERBB4-209ENST00000484594 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
ERBB4-209ENST00000484594 NESP48681 1621 aa18.08■□□□□ 0.48
ERBB4-209ENST00000484594 TOPBP1Q92547 1522 aa18■□□□□ 0.47
ERBB4-209ENST00000484594 MRC2Q9UBG0 1479 aa17.96■□□□□ 0.47
ERBB4-209ENST00000484594 WDR97A6NE52 1622 aa17.96■□□□□ 0.47
ERBB4-209ENST00000484594 WDR62O43379 1518 aa17.94■□□□□ 0.46
ERBB4-209ENST00000484594 URB2Q14146 1524 aaKnown RBP17.94■□□□□ 0.46
ERBB4-209ENST00000484594 FGD5Q6ZNL6 1462 aa17.92■□□□□ 0.46
ERBB4-209ENST00000484594 KIF21BO75037 1637 aa17.9■□□□□ 0.46
ERBB4-209ENST00000484594 THOC2Q8NI27 1593 aaKnown RBP17.9■□□□□ 0.46
ERBB4-209ENST00000484594 ABCA10Q8WWZ4 1543 aa17.89■□□□□ 0.45
ERBB4-209ENST00000484594 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
ERBB4-209ENST00000484594 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
ERBB4-209ENST00000484594 SOGA1O94964 1423 aa17.83■□□□□ 0.44
ERBB4-209ENST00000484594 ERICH3Q5RHP9 1530 aa17.82■□□□□ 0.44
ERBB4-209ENST00000484594 TARBP1Q13395 1621 aaKnown RBP17.82■□□□□ 0.44
ERBB4-209ENST00000484594 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
ERBB4-209ENST00000484594 ABCA5Q8WWZ7 1642 aa17.79■□□□□ 0.44
ERBB4-209ENST00000484594 CUL7Q14999 1698 aa17.78■□□□□ 0.44
ERBB4-209ENST00000484594 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
ERBB4-209ENST00000484594 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
ERBB4-209ENST00000484594 GOLGA3Q08378 1498 aa17.75■□□□□ 0.43
ERBB4-209ENST00000484594 CUX2O14529 1486 aa17.73■□□□□ 0.43
ERBB4-209ENST00000484594 PRXQ9BXM0 1461 aa17.73■□□□□ 0.43
ERBB4-209ENST00000484594 RUSC2Q8N2Y8 1516 aa17.73■□□□□ 0.43
ERBB4-209ENST00000484594 PBRM1Q86U86 1689 aa17.68■□□□□ 0.42
ERBB4-209ENST00000484594 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
ERBB4-209ENST00000484594 TNIKQ9UKE5 1360 aa17.65■□□□□ 0.42
ERBB4-209ENST00000484594 GAPVD1Q14C86 1478 aa17.62■□□□□ 0.41
ERBB4-209ENST00000484594 IGF1RP08069 1367 aa17.61■□□□□ 0.41
ERBB4-209ENST00000484594 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
ERBB4-209ENST00000484594 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
ERBB4-209ENST00000484594 EIF4G3O43432 1585 aaKnown RBP17.56■□□□□ 0.4
ERBB4-209ENST00000484594 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
ERBB4-209ENST00000484594 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
ERBB4-209ENST00000484594 CTTNBP2Q8WZ74 1663 aa17.53■□□□□ 0.4
ERBB4-209ENST00000484594 CARMIL1Q5VZK9 1371 aa17.53■□□□□ 0.4
ERBB4-209ENST00000484594 MAGI1Q96QZ7 1491 aaPredicted RBP17.51■□□□□ 0.39
ERBB4-209ENST00000484594 LOC105371045A0A1W2PR82 267 aa17.5■□□□□ 0.39
ERBB4-209ENST00000484594 FHAD1B1AJZ9 1412 aa17.49■□□□□ 0.39
ERBB4-209ENST00000484594 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
ERBB4-209ENST00000484594 TDRD9Q8NDG6 1382 aaKnown RBP17.44■□□□□ 0.38
ERBB4-209ENST00000484594 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
ERBB4-209ENST00000484594 EFCAB5A4FU69 1503 aa17.4■□□□□ 0.38
ERBB4-209ENST00000484594 AQRO60306 1485 aaKnown RBP eCLIP17.39■□□□□ 0.38
ERBB4-209ENST00000484594 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
ERBB4-209ENST00000484594 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
ERBB4-209ENST00000484594 SNAPC4Q5SXM2 1469 aa17.35■□□□□ 0.37
ERBB4-209ENST00000484594 CLIP1P30622 1438 aa17.35■□□□□ 0.37
ERBB4-209ENST00000484594 GRIN2AQ12879 1464 aa17.32■□□□□ 0.36
ERBB4-209ENST00000484594 SAMD9Q5K651 1589 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms