RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
LDLRAP1-205ENST00000484476 CCDC180Q9P1Z9 1646 aa30.2■■■□□ 2.43
LDLRAP1-205ENST00000484476 ABCC9O60706 1549 aa29.98■■■□□ 2.39
LDLRAP1-205ENST00000484476 DCAF8L2P0C7V8 631 aa28.79■■■□□ 2.2
LDLRAP1-205ENST00000484476 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.18
LDLRAP1-205ENST00000484476 NACADO15069 1562 aa28.58■■■□□ 2.17
LDLRAP1-205ENST00000484476 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
LDLRAP1-205ENST00000484476 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
LDLRAP1-205ENST00000484476 PABPN1Q86U42 306 aaKnown RBP eCLIP28.05■■■□□ 2.08
LDLRAP1-205ENST00000484476 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
LDLRAP1-205ENST00000484476 UNC13AQ9UPW8 1703 aa27.79■■■□□ 2.04
LDLRAP1-205ENST00000484476 DNAJC5BQ9UF47 199 aa27.76■■■□□ 2.03
LDLRAP1-205ENST00000484476 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
LDLRAP1-205ENST00000484476 SCRIBQ14160 1630 aa27.58■■■□□ 2.01
LDLRAP1-205ENST00000484476 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
LDLRAP1-205ENST00000484476 EIF4G1Q04637 1599 aaKnown RBP27.06■■□□□ 1.92
LDLRAP1-205ENST00000484476 CC2D2AQ9P2K1 1620 aa27.03■■□□□ 1.92
LDLRAP1-205ENST00000484476 CECR2Q9BXF3 1484 aa27■■□□□ 1.91
LDLRAP1-205ENST00000484476 NCAPD3P42695 1498 aa26.38■■□□□ 1.81
LDLRAP1-205ENST00000484476 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.81
LDLRAP1-205ENST00000484476 ATAD2BQ9ULI0 1458 aa26.32■■□□□ 1.8
LDLRAP1-205ENST00000484476 SMARCA2P51531 1590 aa26.32■■□□□ 1.8
LDLRAP1-205ENST00000484476 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
LDLRAP1-205ENST00000484476 HMGXB3Q12766 1538 aa26.16■■□□□ 1.78
LDLRAP1-205ENST00000484476 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
LDLRAP1-205ENST00000484476 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
LDLRAP1-205ENST00000484476 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
LDLRAP1-205ENST00000484476 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
LDLRAP1-205ENST00000484476 NESP48681 1621 aa25.77■■□□□ 1.72
LDLRAP1-205ENST00000484476 WIZO95785 1651 aa25.76■■□□□ 1.71
LDLRAP1-205ENST00000484476 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
LDLRAP1-205ENST00000484476 CUX2O14529 1486 aa25.72■■□□□ 1.71
LDLRAP1-205ENST00000484476 LAMC3Q9Y6N6 1575 aa25.71■■□□□ 1.71
LDLRAP1-205ENST00000484476 PDS5BQ9NTI5 1447 aa25.69■■□□□ 1.7
LDLRAP1-205ENST00000484476 CADPSQ9ULU8 1353 aa25.65■■□□□ 1.7
LDLRAP1-205ENST00000484476 TOP2AP11388 1531 aaKnown RBP25.52■■□□□ 1.68
LDLRAP1-205ENST00000484476 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.65
LDLRAP1-205ENST00000484476 DNAJC5Q9H3Z4 198 aa25.38■■□□□ 1.65
LDLRAP1-205ENST00000484476 THOC2Q8NI27 1593 aaKnown RBP25.36■■□□□ 1.65
LDLRAP1-205ENST00000484476 CFTRP13569 1480 aa25.36■■□□□ 1.65
LDLRAP1-205ENST00000484476 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
LDLRAP1-205ENST00000484476 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
LDLRAP1-205ENST00000484476 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
LDLRAP1-205ENST00000484476 CCDC88BA6NC98 1476 aa25.26■■□□□ 1.63
LDLRAP1-205ENST00000484476 WDR62O43379 1518 aa25.18■■□□□ 1.62
LDLRAP1-205ENST00000484476 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
LDLRAP1-205ENST00000484476 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
LDLRAP1-205ENST00000484476 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
LDLRAP1-205ENST00000484476 ABCC8Q09428 1581 aa24.94■■□□□ 1.58
LDLRAP1-205ENST00000484476 TOPBP1Q92547 1522 aa24.83■■□□□ 1.57
LDLRAP1-205ENST00000484476 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
LDLRAP1-205ENST00000484476 DNMBPQ6XZF7 1577 aa24.77■■□□□ 1.56
LDLRAP1-205ENST00000484476 OSCARQ8IYS5 282 aa24.77■■□□□ 1.56
LDLRAP1-205ENST00000484476 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
LDLRAP1-205ENST00000484476 SOGA1O94964 1423 aa24.61■■□□□ 1.53
LDLRAP1-205ENST00000484476 POLA1P09884 1462 aaPredicted RBP24.59■■□□□ 1.53
LDLRAP1-205ENST00000484476 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.521e-6■■■■■ 43.1
LDLRAP1-205ENST00000484476 FBLN2P98095 1184 aa24.53■■□□□ 1.52
LDLRAP1-205ENST00000484476 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
LDLRAP1-205ENST00000484476 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
LDLRAP1-205ENST00000484476 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
LDLRAP1-205ENST00000484476 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
LDLRAP1-205ENST00000484476 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
LDLRAP1-205ENST00000484476 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
LDLRAP1-205ENST00000484476 CUX1P39880 1505 aa24.49■■□□□ 1.51
LDLRAP1-205ENST00000484476 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
LDLRAP1-205ENST00000484476 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
LDLRAP1-205ENST00000484476 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
LDLRAP1-205ENST00000484476 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
LDLRAP1-205ENST00000484476 GAPVD1Q14C86 1478 aa24.28■■□□□ 1.48
LDLRAP1-205ENST00000484476 SNAPC4Q5SXM2 1469 aa24.28■■□□□ 1.48
LDLRAP1-205ENST00000484476 MAGI1Q96QZ7 1491 aaPredicted RBP24.27■■□□□ 1.48
LDLRAP1-205ENST00000484476 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
LDLRAP1-205ENST00000484476 CHD1O14646 1710 aa24.21■■□□□ 1.47
LDLRAP1-205ENST00000484476 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
LDLRAP1-205ENST00000484476 SYNJ2O15056 1496 aa24.18■■□□□ 1.46
LDLRAP1-205ENST00000484476 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
LDLRAP1-205ENST00000484476 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
LDLRAP1-205ENST00000484476 CYB5RLQ6IPT4 315 aa24.15■■□□□ 1.46
LDLRAP1-205ENST00000484476 RIMBP3CA6NJZ7 1639 aa24.14■■□□□ 1.46
LDLRAP1-205ENST00000484476 RIMBP3BA6NNM3 1639 aa24.14■■□□□ 1.46
LDLRAP1-205ENST00000484476 RIMBP3Q9UFD9 1639 aa24.14■■□□□ 1.46
LDLRAP1-205ENST00000484476 SYNJ1O43426 1573 aa24.14■■□□□ 1.45
LDLRAP1-205ENST00000484476 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
LDLRAP1-205ENST00000484476 PBRM1Q86U86 1689 aa24.08■■□□□ 1.45
LDLRAP1-205ENST00000484476 FHAD1B1AJZ9 1412 aa24■■□□□ 1.43
LDLRAP1-205ENST00000484476 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
LDLRAP1-205ENST00000484476 CLASP1Q7Z460 1538 aa23.97■■□□□ 1.43
LDLRAP1-205ENST00000484476 GRIN2AQ12879 1464 aa23.96■■□□□ 1.43
LDLRAP1-205ENST00000484476 KIF27Q86VH2 1401 aa23.92■■□□□ 1.42
LDLRAP1-205ENST00000484476 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
LDLRAP1-205ENST00000484476 ARAP1Q96P48 1450 aa23.9■■□□□ 1.42
LDLRAP1-205ENST00000484476 TRHP20396 242 aaPredicted RBP23.86■■□□□ 1.41
LDLRAP1-205ENST00000484476 NUP160Q12769 1436 aa23.84■■□□□ 1.41
LDLRAP1-205ENST00000484476 IGF1RP08069 1367 aa23.79■■□□□ 1.4
LDLRAP1-205ENST00000484476 JPH4Q96JJ6 628 aa23.77■■□□□ 1.4
LDLRAP1-205ENST00000484476 CEP170Q5SW79 1584 aa23.77■■□□□ 1.4
LDLRAP1-205ENST00000484476 CARMIL1Q5VZK9 1371 aa23.69■■□□□ 1.38
LDLRAP1-205ENST00000484476 PRG4Q92954 1404 aaPredicted RBP23.68■■□□□ 1.38
LDLRAP1-205ENST00000484476 CUL7Q14999 1698 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms