RNA–Protein interactions for RNA: ENST00000484458.2

RNF216-209, Transcript of ring finger protein 216, humanhuman

TSL 5

Gene RNF216, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216-209ENST00000484458 NISCHQ9Y2I1 1504 aa18.87■□□□□ 0.61
RNF216-209ENST00000484458 AEBP2Q6ZN18 517 aaPredicted RBP18.43■□□□□ 0.54
RNF216-209ENST00000484458 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
RNF216-209ENST00000484458 CCDC180Q9P1Z9 1646 aa16.59■□□□□ 0.25
RNF216-209ENST00000484458 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
RNF216-209ENST00000484458 DCAF1Q9Y4B6 1507 aa15.76■□□□□ 0.11
RNF216-209ENST00000484458 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
RNF216-209ENST00000484458 PHF23Q9BUL5 403 aaPredicted RBP15.71■□□□□ 0.11
RNF216-209ENST00000484458 ABCC9O60706 1549 aa15.71■□□□□ 0.11
RNF216-209ENST00000484458 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
RNF216-209ENST00000484458 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
RNF216-209ENST00000484458 NACADO15069 1562 aa15.58■□□□□ 0.09
RNF216-209ENST00000484458 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
RNF216-209ENST00000484458 SCRIBQ14160 1630 aa15.01□□□□□ -0.01
RNF216-209ENST00000484458 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
RNF216-209ENST00000484458 UNC13AQ9UPW8 1703 aa14.82□□□□□ -0.04
RNF216-209ENST00000484458 BICRAQ9NZM4 1560 aa14.8□□□□□ -0.04
RNF216-209ENST00000484458 PABPN1Q86U42 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
RNF216-209ENST00000484458 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
RNF216-209ENST00000484458 FOXD1Q16676 465 aa14.57□□□□□ -0.08
RNF216-209ENST00000484458 CECR2Q9BXF3 1484 aa14.53□□□□□ -0.08
RNF216-209ENST00000484458 RSF1Q96T23 1441 aaPredicted RBP14.53□□□□□ -0.08
RNF216-209ENST00000484458 PLPPR3Q6T4P5 718 aa14.49□□□□□ -0.09
RNF216-209ENST00000484458 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
RNF216-209ENST00000484458 SUPT5HO00267 1087 aaKnown RBP14.47□□□□□ -0.09
RNF216-209ENST00000484458 SMARCA2P51531 1590 aa14.45□□□□□ -0.1
RNF216-209ENST00000484458 MROH2BQ7Z745 1585 aa14.45□□□□□ -0.1
RNF216-209ENST00000484458 EIF4G1Q04637 1599 aaKnown RBP14.44□□□□□ -0.1
RNF216-209ENST00000484458 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
RNF216-209ENST00000484458 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
RNF216-209ENST00000484458 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
RNF216-209ENST00000484458 HMGXB3Q12766 1538 aa14.3□□□□□ -0.12
RNF216-209ENST00000484458 BAZ1BQ9UIG0 1483 aaKnown RBP14.28□□□□□ -0.12
RNF216-209ENST00000484458 TOP2AP11388 1531 aaKnown RBP14.26□□□□□ -0.13
RNF216-209ENST00000484458 WIZO95785 1651 aa14.26□□□□□ -0.13
RNF216-209ENST00000484458 CC2D2AQ9P2K1 1620 aa14.24□□□□□ -0.13
RNF216-209ENST00000484458 CCDC88BA6NC98 1476 aa14.09□□□□□ -0.15
RNF216-209ENST00000484458 DNAJC5BQ9UF47 199 aa14□□□□□ -0.17
RNF216-209ENST00000484458 CADPSQ9ULU8 1353 aa13.98□□□□□ -0.17
RNF216-209ENST00000484458 CFTRP13569 1480 aa13.95□□□□□ -0.18
RNF216-209ENST00000484458 PPP6R1Q9UPN7 881 aa13.92□□□□□ -0.18
RNF216-209ENST00000484458 ADRA2BP18089 450 aa13.91□□□□□ -0.18
RNF216-209ENST00000484458 LAMC3Q9Y6N6 1575 aa13.89□□□□□ -0.19
RNF216-209ENST00000484458 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
RNF216-209ENST00000484458 ABCC8Q09428 1581 aa13.79□□□□□ -0.2
RNF216-209ENST00000484458 TRIM41Q8WV44 630 aa13.78□□□□□ -0.2
RNF216-209ENST00000484458 FANCD2Q9BXW9 1451 aa13.74□□□□□ -0.21
RNF216-209ENST00000484458 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.21
RNF216-209ENST00000484458 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
RNF216-209ENST00000484458 PIAS4Q8N2W9 510 aaPredicted RBP13.72□□□□□ -0.21
RNF216-209ENST00000484458 CEP164Q9UPV0 1460 aa13.71□□□□□ -0.21
RNF216-209ENST00000484458 NESP48681 1621 aa13.66□□□□□ -0.22
RNF216-209ENST00000484458 ERCC6Q03468 1493 aa13.63□□□□□ -0.23
RNF216-209ENST00000484458 EEA1Q15075 1411 aa13.61□□□□□ -0.23
RNF216-209ENST00000484458 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
RNF216-209ENST00000484458 MRC2Q9UBG0 1479 aa13.59□□□□□ -0.23
RNF216-209ENST00000484458 DNMBPQ6XZF7 1577 aa13.58□□□□□ -0.24
RNF216-209ENST00000484458 BIVM-ERCC5R4GMW8 1640 aa13.55□□□□□ -0.24
RNF216-209ENST00000484458 TOPBP1Q92547 1522 aa13.54□□□□□ -0.24
RNF216-209ENST00000484458 CUX1P39880 1505 aa13.54□□□□□ -0.24
RNF216-209ENST00000484458 MSH5O43196 834 aa13.51□□□□□ -0.25
RNF216-209ENST00000484458 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
RNF216-209ENST00000484458 WDR62O43379 1518 aa13.49□□□□□ -0.25
RNF216-209ENST00000484458 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
RNF216-209ENST00000484458 SOGA1O94964 1423 aa13.49□□□□□ -0.25
RNF216-209ENST00000484458 KIF27Q86VH2 1401 aa13.48□□□□□ -0.25
RNF216-209ENST00000484458 KIF21AQ7Z4S6 1674 aa13.47□□□□□ -0.25
RNF216-209ENST00000484458 FGD5Q6ZNL6 1462 aa13.46□□□□□ -0.25
RNF216-209ENST00000484458 POLA1P09884 1462 aaPredicted RBP13.45□□□□□ -0.26
RNF216-209ENST00000484458 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
RNF216-209ENST00000484458 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
RNF216-209ENST00000484458 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
RNF216-209ENST00000484458 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
RNF216-209ENST00000484458 CUX2O14529 1486 aa13.4□□□□□ -0.26
RNF216-209ENST00000484458 THOC2Q8NI27 1593 aaKnown RBP13.38□□□□□ -0.27
RNF216-209ENST00000484458 IGF1RP08069 1367 aa13.32□□□□□ -0.28
RNF216-209ENST00000484458 GAPVD1Q14C86 1478 aa13.32□□□□□ -0.28
RNF216-209ENST00000484458 RAD54L2Q9Y4B4 1467 aa13.32□□□□□ -0.28
RNF216-209ENST00000484458 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
RNF216-209ENST00000484458 TARBP1Q13395 1621 aaKnown RBP13.31□□□□□ -0.28
RNF216-209ENST00000484458 FAM9AQ8IZU1 332 aaPredicted RBP13.29□□□□□ -0.28
RNF216-209ENST00000484458 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
RNF216-209ENST00000484458 CARMIL1Q5VZK9 1371 aa13.28□□□□□ -0.28
RNF216-209ENST00000484458 TDRD9Q8NDG6 1382 aaKnown RBP13.28□□□□□ -0.28
RNF216-209ENST00000484458 PRXQ9BXM0 1461 aa13.26□□□□□ -0.29
RNF216-209ENST00000484458 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
RNF216-209ENST00000484458 ABCA5Q8WWZ7 1642 aa13.24□□□□□ -0.29
RNF216-209ENST00000484458 RAPGEF2Q9Y4G8 1499 aa13.23□□□□□ -0.29
RNF216-209ENST00000484458 FHAD1B1AJZ9 1412 aa13.23□□□□□ -0.29
RNF216-209ENST00000484458 CUL7Q14999 1698 aa13.23□□□□□ -0.29
RNF216-209ENST00000484458 KIF21BO75037 1637 aa13.23□□□□□ -0.29
RNF216-209ENST00000484458 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
RNF216-209ENST00000484458 MAGI1Q96QZ7 1491 aaPredicted RBP13.23□□□□□ -0.29
RNF216-209ENST00000484458 UBTFP17480 764 aaKnown RBP13.22□□□□□ -0.29
RNF216-209ENST00000484458 TNIKQ9UKE5 1360 aa13.21□□□□□ -0.29
RNF216-209ENST00000484458 AQRO60306 1485 aaKnown RBP eCLIP13.21□□□□□ -0.34e-8■■■■■ 34.1
RNF216-209ENST00000484458 CHMP7Q8WUX9 453 aaPredicted RBP13.17□□□□□ -0.3
RNF216-209ENST00000484458 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
RNF216-209ENST00000484458 LOC105371045A0A1W2PR82 267 aa13.14□□□□□ -0.31
RNF216-209ENST00000484458 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms