RNA–Protein interactions for RNA: ENST00000484387.1

COL22A1-204, Transcript of collagen type XXII alpha 1 chain, humanhuman

TSL 3

Gene COL22A1, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-204ENST00000484387 NISCHQ9Y2I1 1504 aa42.83■■■■■ 4.45
COL22A1-204ENST00000484387 ABCC9O60706 1549 aa38.33■■■■□ 3.73
COL22A1-204ENST00000484387 CCDC180Q9P1Z9 1646 aa38.16■■■■□ 3.7
COL22A1-204ENST00000484387 DNAJC5BQ9UF47 199 aa36.76■■■■□ 3.48
COL22A1-204ENST00000484387 RB1CC1Q8TDY2 1594 aa36.05■■■■□ 3.36
COL22A1-204ENST00000484387 NACADO15069 1562 aa35.89■■■■□ 3.34
COL22A1-204ENST00000484387 DCAF8L2P0C7V8 631 aa35.86■■■■□ 3.33
COL22A1-204ENST00000484387 ZCCHC6Q5VYS8 1495 aaKnown RBP35.66■■■■□ 3.3
COL22A1-204ENST00000484387 MYO15BQ96JP2 1530 aa35.6■■■■□ 3.29
COL22A1-204ENST00000484387 PABPN1Q86U42 306 aaKnown RBP eCLIP35.55■■■■□ 3.28
COL22A1-204ENST00000484387 DCAF1Q9Y4B6 1507 aa35.41■■■■□ 3.26
COL22A1-204ENST00000484387 UNC13AQ9UPW8 1703 aa35.36■■■■□ 3.25
COL22A1-204ENST00000484387 BICRAQ9NZM4 1560 aa35.15■■■■□ 3.22
COL22A1-204ENST00000484387 SCRIBQ14160 1630 aa34.84■■■■□ 3.17
COL22A1-204ENST00000484387 CC2D2AQ9P2K1 1620 aa34.58■■■■□ 3.13
COL22A1-204ENST00000484387 CECR2Q9BXF3 1484 aa34.58■■■■□ 3.13
COL22A1-204ENST00000484387 SHROOM4Q9ULL8 1493 aa34.48■■■■□ 3.11
COL22A1-204ENST00000484387 EIF4G1Q04637 1599 aaKnown RBP34.29■■■■□ 3.08
COL22A1-204ENST00000484387 DNAJC5Q9H3Z4 198 aa34.25■■■■□ 3.07
COL22A1-204ENST00000484387 SMARCA4P51532 1647 aa33.29■■■□□ 2.92
COL22A1-204ENST00000484387 CUX2O14529 1486 aa33.29■■■□□ 2.92
COL22A1-204ENST00000484387 BAZ1AQ9NRL2 1556 aaPredicted RBP33.21■■■□□ 2.91
COL22A1-204ENST00000484387 ATAD2BQ9ULI0 1458 aa33.12■■■□□ 2.89
COL22A1-204ENST00000484387 NCAPD3P42695 1498 aa33.1■■■□□ 2.89
COL22A1-204ENST00000484387 SMARCA2P51531 1590 aa33.08■■■□□ 2.89
COL22A1-204ENST00000484387 ERCC6Q03468 1493 aa33.05■■■□□ 2.88
COL22A1-204ENST00000484387 MROH2BQ7Z745 1585 aa33.03■■■□□ 2.88
COL22A1-204ENST00000484387 HMGXB3Q12766 1538 aa32.95■■■□□ 2.87
COL22A1-204ENST00000484387 PEG3Q9GZU2 1588 aa32.94■■■□□ 2.86
COL22A1-204ENST00000484387 BAZ1BQ9UIG0 1483 aaKnown RBP32.86■■■□□ 2.85
COL22A1-204ENST00000484387 NESP48681 1621 aa32.73■■■□□ 2.83
COL22A1-204ENST00000484387 WIZO95785 1651 aa32.69■■■□□ 2.82
COL22A1-204ENST00000484387 RSF1Q96T23 1441 aaPredicted RBP32.58■■■□□ 2.81
COL22A1-204ENST00000484387 THOC2Q8NI27 1593 aaKnown RBP32.54■■■□□ 2.8
COL22A1-204ENST00000484387 TRIM41Q8WV44 630 aa32.4■■■□□ 2.78
COL22A1-204ENST00000484387 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
COL22A1-204ENST00000484387 LAMC3Q9Y6N6 1575 aa32.28■■■□□ 2.76
COL22A1-204ENST00000484387 KIF21AQ7Z4S6 1674 aa32.27■■■□□ 2.76
COL22A1-204ENST00000484387 CADPSQ9ULU8 1353 aa32.14■■■□□ 2.74
COL22A1-204ENST00000484387 PDS5BQ9NTI5 1447 aa32.08■■■□□ 2.73
COL22A1-204ENST00000484387 CFTRP13569 1480 aa31.92■■■□□ 2.7
COL22A1-204ENST00000484387 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
COL22A1-204ENST00000484387 MRC2Q9UBG0 1479 aa31.9■■■□□ 2.7
COL22A1-204ENST00000484387 WDR62O43379 1518 aa31.87■■■□□ 2.69
COL22A1-204ENST00000484387 FANCD2Q9BXW9 1451 aa31.79■■■□□ 2.68
COL22A1-204ENST00000484387 CEP164Q9UPV0 1460 aa31.77■■■□□ 2.68
COL22A1-204ENST00000484387 PRDM2Q13029 1718 aa31.75■■■□□ 2.67
COL22A1-204ENST00000484387 SUPT5HO00267 1087 aaKnown RBP31.67■■■□□ 2.66
COL22A1-204ENST00000484387 OSCARQ8IYS5 282 aa31.62■■■□□ 2.65
COL22A1-204ENST00000484387 URB2Q14146 1524 aaKnown RBP31.49■■■□□ 2.63
COL22A1-204ENST00000484387 RIMBP3CA6NJZ7 1639 aa31.39■■■□□ 2.62
COL22A1-204ENST00000484387 RIMBP3BA6NNM3 1639 aa31.39■■■□□ 2.62
COL22A1-204ENST00000484387 RIMBP3Q9UFD9 1639 aa31.39■■■□□ 2.62
COL22A1-204ENST00000484387 TOPBP1Q92547 1522 aa31.28■■■□□ 2.6
COL22A1-204ENST00000484387 DNMBPQ6XZF7 1577 aa31.23■■■□□ 2.59
COL22A1-204ENST00000484387 ABCC8Q09428 1581 aa31.22■■■□□ 2.59
COL22A1-204ENST00000484387 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
COL22A1-204ENST00000484387 ZNF608Q9ULD9 1512 aaPredicted RBP31.11■■■□□ 2.57
COL22A1-204ENST00000484387 IFT140Q96RY7 1462 aa31.09■■■□□ 2.57
COL22A1-204ENST00000484387 POLA1P09884 1462 aaPredicted RBP31■■■□□ 2.55
COL22A1-204ENST00000484387 CUX1P39880 1505 aa30.99■■■□□ 2.55
COL22A1-204ENST00000484387 CYB5RLQ6IPT4 315 aa30.98■■■□□ 2.55
COL22A1-204ENST00000484387 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.54
COL22A1-204ENST00000484387 FGD5Q6ZNL6 1462 aa30.91■■■□□ 2.54
COL22A1-204ENST00000484387 EIF4G3O43432 1585 aaKnown RBP30.88■■■□□ 2.53
COL22A1-204ENST00000484387 RAD54L2Q9Y4B4 1467 aa30.88■■■□□ 2.53
COL22A1-204ENST00000484387 TRHP20396 242 aaPredicted RBP30.86■■■□□ 2.53
COL22A1-204ENST00000484387 SOGA1O94964 1423 aa30.85■■■□□ 2.53
COL22A1-204ENST00000484387 ARAP1Q96P48 1450 aa30.84■■■□□ 2.53
COL22A1-204ENST00000484387 CHD1O14646 1710 aa30.81■■■□□ 2.52
COL22A1-204ENST00000484387 AQRO60306 1485 aaKnown RBP eCLIP30.79■■■□□ 2.52
COL22A1-204ENST00000484387 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
COL22A1-204ENST00000484387 TDRD9Q8NDG6 1382 aaKnown RBP30.71■■■□□ 2.51
COL22A1-204ENST00000484387 BIVM-ERCC5R4GMW8 1640 aa30.69■■■□□ 2.5
COL22A1-204ENST00000484387 SYNJ1O43426 1573 aa30.69■■■□□ 2.5
COL22A1-204ENST00000484387 WDR97A6NE52 1622 aa30.69■■■□□ 2.5
COL22A1-204ENST00000484387 TOP2BQ02880 1626 aa30.69■■■□□ 2.5
COL22A1-204ENST00000484387 FBLN2P98095 1184 aa30.59■■■□□ 2.49
COL22A1-204ENST00000484387 ABCA10Q8WWZ4 1543 aa30.58■■■□□ 2.49
COL22A1-204ENST00000484387 GRIN2BQ13224 1484 aa30.51■■■□□ 2.48
COL22A1-204ENST00000484387 SNAPC4Q5SXM2 1469 aa30.51■■■□□ 2.48
COL22A1-204ENST00000484387 GAPVD1Q14C86 1478 aa30.5■■■□□ 2.47
COL22A1-204ENST00000484387 PBRM1Q86U86 1689 aa30.5■■■□□ 2.47
COL22A1-204ENST00000484387 AEBP2Q6ZN18 517 aaPredicted RBP30.5■■■□□ 2.47
COL22A1-204ENST00000484387 ABCA5Q8WWZ7 1642 aa30.5■■■□□ 2.47
COL22A1-204ENST00000484387 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
COL22A1-204ENST00000484387 CLASP1Q7Z460 1538 aa30.43■■■□□ 2.46
COL22A1-204ENST00000484387 SYNJ2O15056 1496 aa30.33■■■□□ 2.45
COL22A1-204ENST00000484387 CHMP7Q8WUX9 453 aaPredicted RBP30.33■■■□□ 2.45
COL22A1-204ENST00000484387 ADAMTS12P58397 1594 aa30.23■■■□□ 2.43
COL22A1-204ENST00000484387 ERICH3Q5RHP9 1530 aa30.22■■■□□ 2.43
COL22A1-204ENST00000484387 FHAD1B1AJZ9 1412 aa30.13■■■□□ 2.41
COL22A1-204ENST00000484387 GRIN2AQ12879 1464 aa30.13■■■□□ 2.41
COL22A1-204ENST00000484387 KIF27Q86VH2 1401 aa30.08■■■□□ 2.41
COL22A1-204ENST00000484387 CEP170Q5SW79 1584 aa30■■■□□ 2.39
COL22A1-204ENST00000484387 NUP160Q12769 1436 aa29.99■■■□□ 2.39
COL22A1-204ENST00000484387 IGF1RP08069 1367 aa29.98■■■□□ 2.39
COL22A1-204ENST00000484387 ERCC6L2Q5T890 1561 aa29.96■■■□□ 2.39
COL22A1-204ENST00000484387 CUL7Q14999 1698 aa29.94■■■□□ 2.38
COL22A1-204ENST00000484387 CARMIL1Q5VZK9 1371 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms