RNA–Protein interactions for RNA: ENST00000484352.5

HTRA2-209, Transcript of HtrA serine peptidase 2, humanhuman

TSL 2

Gene HTRA2, Length 1,771 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2-209ENST00000484352 NISCHQ9Y2I1 1504 aa62■■■■■ 7.51
HTRA2-209ENST00000484352 CCDC180Q9P1Z9 1646 aa54.28■■■■■ 6.28
HTRA2-209ENST00000484352 ZCCHC6Q5VYS8 1495 aaKnown RBP51.98■■■■■ 5.91
HTRA2-209ENST00000484352 ABCC9O60706 1549 aa51.66■■■■■ 5.86
HTRA2-209ENST00000484352 DCAF1Q9Y4B6 1507 aa51.32■■■■■ 5.81
HTRA2-209ENST00000484352 DCAF8L2P0C7V8 631 aa51.3■■■■■ 5.8
HTRA2-209ENST00000484352 MYO15BQ96JP2 1530 aa50.9■■■■■ 5.74
HTRA2-209ENST00000484352 NACADO15069 1562 aa50.69■■■■■ 5.7
HTRA2-209ENST00000484352 RB1CC1Q8TDY2 1594 aa50.33■■■■■ 5.65
HTRA2-209ENST00000484352 SHROOM4Q9ULL8 1493 aa50.15■■■■■ 5.62
HTRA2-209ENST00000484352 SCRIBQ14160 1630 aa49.78■■■■■ 5.56
HTRA2-209ENST00000484352 UNC13AQ9UPW8 1703 aa49.23■■■■■ 5.47
HTRA2-209ENST00000484352 BICRAQ9NZM4 1560 aa48.79■■■■■ 5.4
HTRA2-209ENST00000484352 PABPN1Q86U42 306 aaKnown RBP eCLIP48.64■■■■■ 5.38
HTRA2-209ENST00000484352 CECR2Q9BXF3 1484 aa48.16■■■■■ 5.3
HTRA2-209ENST00000484352 SUPT5HO00267 1087 aaKnown RBP48.08■■■■■ 5.29
HTRA2-209ENST00000484352 BAZ1AQ9NRL2 1556 aaPredicted RBP47.92■■■■■ 5.26
HTRA2-209ENST00000484352 RSF1Q96T23 1441 aaPredicted RBP47.91■■■■■ 5.26
HTRA2-209ENST00000484352 MROH2BQ7Z745 1585 aa47.84■■■■■ 5.25
HTRA2-209ENST00000484352 SMARCA4P51532 1647 aa47.73■■■■■ 5.23
HTRA2-209ENST00000484352 WIZO95785 1651 aa47.41■■■■■ 5.18
HTRA2-209ENST00000484352 EIF4G1Q04637 1599 aaKnown RBP47.37■■■■■ 5.17
HTRA2-209ENST00000484352 PEG3Q9GZU2 1588 aa47.22■■■■■ 5.15
HTRA2-209ENST00000484352 ATAD2BQ9ULI0 1458 aa47.08■■■■■ 5.13
HTRA2-209ENST00000484352 SMARCA2P51531 1590 aa47.07■■■■■ 5.12
HTRA2-209ENST00000484352 TOP2AP11388 1531 aaKnown RBP46.95■■■■■ 5.11
HTRA2-209ENST00000484352 NCAPD3P42695 1498 aa46.79■■■■■ 5.08
HTRA2-209ENST00000484352 BAZ1BQ9UIG0 1483 aaKnown RBP46.79■■■■■ 5.08
HTRA2-209ENST00000484352 CC2D2AQ9P2K1 1620 aa46.77■■■■■ 5.08
HTRA2-209ENST00000484352 HMGXB3Q12766 1538 aa46.67■■■■■ 5.06
HTRA2-209ENST00000484352 CCDC88BA6NC98 1476 aa46.46■■■■■ 5.03
HTRA2-209ENST00000484352 DNAJC5BQ9UF47 199 aa45.96■■■■■ 4.95
HTRA2-209ENST00000484352 CHIC1Q5VXU3 224 aa45.83■■■■■ 4.93
HTRA2-209ENST00000484352 CFTRP13569 1480 aa45.61■■■■■ 4.89
HTRA2-209ENST00000484352 CADPSQ9ULU8 1353 aa45.55■■■■■ 4.88
HTRA2-209ENST00000484352 PRDM2Q13029 1718 aa45.31■■■■■ 4.84
HTRA2-209ENST00000484352 TRIM41Q8WV44 630 aa45.3■■■■■ 4.84
HTRA2-209ENST00000484352 ABCC8Q09428 1581 aa45.29■■■■■ 4.84
HTRA2-209ENST00000484352 LAMC3Q9Y6N6 1575 aa45.25■■■■■ 4.83
HTRA2-209ENST00000484352 NESP48681 1621 aa45.21■■■■■ 4.83
HTRA2-209ENST00000484352 WRNQ14191 1432 aaPredicted RBP eCLIP45.12■■■■■ 4.81
HTRA2-209ENST00000484352 FANCD2Q9BXW9 1451 aa45.01■■■■■ 4.8
HTRA2-209ENST00000484352 PDS5BQ9NTI5 1447 aa44.94■■■■■ 4.78
HTRA2-209ENST00000484352 SYNJ1O43426 1573 aa44.91■■■■■ 4.78
HTRA2-209ENST00000484352 TOP2BQ02880 1626 aa44.81■■■■■ 4.76
HTRA2-209ENST00000484352 CEP164Q9UPV0 1460 aa44.77■■■■■ 4.76
HTRA2-209ENST00000484352 CUX1P39880 1505 aa44.77■■■■■ 4.76
HTRA2-209ENST00000484352 BIVM-ERCC5R4GMW8 1640 aa44.76■■■■■ 4.76
HTRA2-209ENST00000484352 KIF21AQ7Z4S6 1674 aa44.66■■■■■ 4.74
HTRA2-209ENST00000484352 DNMBPQ6XZF7 1577 aa44.53■■■■■ 4.72
HTRA2-209ENST00000484352 TOPBP1Q92547 1522 aa44.47■■■■■ 4.71
HTRA2-209ENST00000484352 URB2Q14146 1524 aaKnown RBP44.45■■■■■ 4.71
HTRA2-209ENST00000484352 ERCC6Q03468 1493 aa44.38■■■■■ 4.69
HTRA2-209ENST00000484352 SOGA1O94964 1423 aa44.37■■■■■ 4.69
HTRA2-209ENST00000484352 FAM9AQ8IZU1 332 aaPredicted RBP44.37■■■■■ 4.69
HTRA2-209ENST00000484352 FGD5Q6ZNL6 1462 aa44.36■■■■■ 4.69
HTRA2-209ENST00000484352 MRC2Q9UBG0 1479 aa44.35■■■■■ 4.69
HTRA2-209ENST00000484352 EEA1Q15075 1411 aa44.28■■■■■ 4.68
HTRA2-209ENST00000484352 POLA1P09884 1462 aaPredicted RBP44.22■■■■■ 4.67
HTRA2-209ENST00000484352 RUSC2Q8N2Y8 1516 aa44.21■■■■■ 4.67
HTRA2-209ENST00000484352 WDR62O43379 1518 aa44.13■■■■■ 4.66
HTRA2-209ENST00000484352 THOC2Q8NI27 1593 aaKnown RBP44.07■■■■■ 4.64
HTRA2-209ENST00000484352 CSRNP3Q8WYN3 585 aa44.06■■■■■ 4.64
HTRA2-209ENST00000484352 RAD54L2Q9Y4B4 1467 aa44.05■■■■■ 4.64
HTRA2-209ENST00000484352 KIF27Q86VH2 1401 aa44.04■■■■■ 4.64
HTRA2-209ENST00000484352 LOC105371045A0A1W2PR82 267 aa44.01■■■■■ 4.64
HTRA2-209ENST00000484352 CUX2O14529 1486 aa43.99■■■■■ 4.63
HTRA2-209ENST00000484352 ABCA10Q8WWZ4 1543 aa43.98■■■■■ 4.63
HTRA2-209ENST00000484352 WDR97A6NE52 1622 aa43.84■■■■■ 4.61
HTRA2-209ENST00000484352 TARBP1Q13395 1621 aaKnown RBP43.84■■■■■ 4.61
HTRA2-209ENST00000484352 IFT140Q96RY7 1462 aa43.76■■■■■ 4.6
HTRA2-209ENST00000484352 EHMT2Q96KQ7 1210 aa43.71■■■■■ 4.59
HTRA2-209ENST00000484352 IGF1RP08069 1367 aa43.69■■■■■ 4.59
HTRA2-209ENST00000484352 KIF21BO75037 1637 aa43.68■■■■■ 4.58
HTRA2-209ENST00000484352 TDRD9Q8NDG6 1382 aaKnown RBP43.67■■■■■ 4.58
HTRA2-209ENST00000484352 ABCA5Q8WWZ7 1642 aa43.64■■■■■ 4.58
HTRA2-209ENST00000484352 PRXQ9BXM0 1461 aa43.62■■■■■ 4.57
HTRA2-209ENST00000484352 GOLGA3Q08378 1498 aa43.6■■■■■ 4.57
HTRA2-209ENST00000484352 GAPVD1Q14C86 1478 aa43.59■■■■■ 4.57
HTRA2-209ENST00000484352 RAPGEF2Q9Y4G8 1499 aa43.5■■■■■ 4.55
HTRA2-209ENST00000484352 ERICH3Q5RHP9 1530 aa43.5■■■■■ 4.55
HTRA2-209ENST00000484352 ZNF608Q9ULD9 1512 aaPredicted RBP43.47■■■■■ 4.55
HTRA2-209ENST00000484352 AQRO60306 1485 aaKnown RBP eCLIP43.47■■■■■ 4.552e-9■■■■□ 21.4
HTRA2-209ENST00000484352 CARMIL1Q5VZK9 1371 aa43.46■■■■■ 4.55
HTRA2-209ENST00000484352 UBTFP17480 764 aaKnown RBP43.44■■■■■ 4.54
HTRA2-209ENST00000484352 TNIKQ9UKE5 1360 aa43.4■■■■■ 4.54
HTRA2-209ENST00000484352 CUL7Q14999 1698 aa43.39■■■■■ 4.54
HTRA2-209ENST00000484352 GRIN2BQ13224 1484 aa43.33■■■■■ 4.53
HTRA2-209ENST00000484352 PBRM1Q86U86 1689 aa43.33■■■■■ 4.53
HTRA2-209ENST00000484352 EIF4G3O43432 1585 aaKnown RBP43.32■■■■■ 4.53
HTRA2-209ENST00000484352 FHAD1B1AJZ9 1412 aa43.13■■■■■ 4.5
HTRA2-209ENST00000484352 CEP162Q5TB80 1403 aa43.1■■■■■ 4.49
HTRA2-209ENST00000484352 ADAMTS12P58397 1594 aa43.09■■■■■ 4.49
HTRA2-209ENST00000484352 SNAPC4Q5SXM2 1469 aa43.05■■■■■ 4.48
HTRA2-209ENST00000484352 MAGI1Q96QZ7 1491 aaPredicted RBP43.03■■■■■ 4.48
HTRA2-209ENST00000484352 CLIP1P30622 1438 aa42.89■■■■■ 4.46
HTRA2-209ENST00000484352 SYNJ2O15056 1496 aa42.86■■■■■ 4.45
HTRA2-209ENST00000484352 CTTNBP2Q8WZ74 1663 aa42.8■■■■■ 4.44
HTRA2-209ENST00000484352 GRIN2AQ12879 1464 aa42.79■■■■■ 4.44
HTRA2-209ENST00000484352 RANGAP1P46060 587 aaPredicted RBP42.78■■■■■ 4.44
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms