RNA–Protein interactions for RNA: ENST00000484011.1

SDK1-209, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 3

Gene SDK1, Length 493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-209ENST00000484011 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.08
SDK1-209ENST00000484011 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
SDK1-209ENST00000484011 ABCC9O60706 1549 aa23.62■■□□□ 1.37
SDK1-209ENST00000484011 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
SDK1-209ENST00000484011 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
SDK1-209ENST00000484011 DCAF8L2P0C7V8 631 aa23.28■■□□□ 1.32
SDK1-209ENST00000484011 MYO15BQ96JP2 1530 aa23.2■■□□□ 1.3
SDK1-209ENST00000484011 NACADO15069 1562 aa23.13■■□□□ 1.29
SDK1-209ENST00000484011 RB1CC1Q8TDY2 1594 aa23■■□□□ 1.27
SDK1-209ENST00000484011 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
SDK1-209ENST00000484011 SHROOM4Q9ULL8 1493 aa22.48■■□□□ 1.19
SDK1-209ENST00000484011 UNC13AQ9UPW8 1703 aa22.36■■□□□ 1.17
SDK1-209ENST00000484011 BICRAQ9NZM4 1560 aa22.22■■□□□ 1.15
SDK1-209ENST00000484011 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
SDK1-209ENST00000484011 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.08
SDK1-209ENST00000484011 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
SDK1-209ENST00000484011 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
SDK1-209ENST00000484011 EIF4G1Q04637 1599 aaKnown RBP21.62■■□□□ 1.05
SDK1-209ENST00000484011 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
SDK1-209ENST00000484011 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
SDK1-209ENST00000484011 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
SDK1-209ENST00000484011 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
SDK1-209ENST00000484011 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
SDK1-209ENST00000484011 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
SDK1-209ENST00000484011 WIZO95785 1651 aa21.38■■□□□ 1.01
SDK1-209ENST00000484011 CC2D2AQ9P2K1 1620 aa21.38■■□□□ 1.01
SDK1-209ENST00000484011 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
SDK1-209ENST00000484011 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
SDK1-209ENST00000484011 HMGXB3Q12766 1538 aa21.26■□□□□ 0.99
SDK1-209ENST00000484011 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
SDK1-209ENST00000484011 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
SDK1-209ENST00000484011 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
SDK1-209ENST00000484011 CADPSQ9ULU8 1353 aa20.76■□□□□ 0.91
SDK1-209ENST00000484011 CFTRP13569 1480 aa20.74■□□□□ 0.91
SDK1-209ENST00000484011 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
SDK1-209ENST00000484011 NESP48681 1621 aa20.57■□□□□ 0.88
SDK1-209ENST00000484011 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
SDK1-209ENST00000484011 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
SDK1-209ENST00000484011 FANCD2Q9BXW9 1451 aa20.49■□□□□ 0.87
SDK1-209ENST00000484011 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
SDK1-209ENST00000484011 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
SDK1-209ENST00000484011 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
SDK1-209ENST00000484011 ERCC6Q03468 1493 aa20.35■□□□□ 0.85
SDK1-209ENST00000484011 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
SDK1-209ENST00000484011 TRIM41Q8WV44 630 aa20.33■□□□□ 0.85
SDK1-209ENST00000484011 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
SDK1-209ENST00000484011 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.84
SDK1-209ENST00000484011 CUX1P39880 1505 aa20.24■□□□□ 0.83
SDK1-209ENST00000484011 TOP2BQ02880 1626 aa20.24■□□□□ 0.83
SDK1-209ENST00000484011 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
SDK1-209ENST00000484011 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
SDK1-209ENST00000484011 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
SDK1-209ENST00000484011 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
SDK1-209ENST00000484011 BIVM-ERCC5R4GMW8 1640 aa20.2■□□□□ 0.82
SDK1-209ENST00000484011 WDR62O43379 1518 aa20.17■□□□□ 0.82
SDK1-209ENST00000484011 THOC2Q8NI27 1593 aaKnown RBP20.13■□□□□ 0.81
SDK1-209ENST00000484011 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
SDK1-209ENST00000484011 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
SDK1-209ENST00000484011 SOGA1O94964 1423 aa20.05■□□□□ 0.8
SDK1-209ENST00000484011 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
SDK1-209ENST00000484011 CUX2O14529 1486 aa19.98■□□□□ 0.79
SDK1-209ENST00000484011 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
SDK1-209ENST00000484011 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
SDK1-209ENST00000484011 EEA1Q15075 1411 aa19.95■□□□□ 0.78
SDK1-209ENST00000484011 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
SDK1-209ENST00000484011 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
SDK1-209ENST00000484011 WDR97A6NE52 1622 aa19.86■□□□□ 0.77
SDK1-209ENST00000484011 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
SDK1-209ENST00000484011 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.77
SDK1-209ENST00000484011 RUSC2Q8N2Y8 1516 aa19.83■□□□□ 0.77
SDK1-209ENST00000484011 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.77
SDK1-209ENST00000484011 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
SDK1-209ENST00000484011 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
SDK1-209ENST00000484011 ABCA5Q8WWZ7 1642 aa19.78■□□□□ 0.76
SDK1-209ENST00000484011 IGF1RP08069 1367 aa19.77■□□□□ 0.76
SDK1-209ENST00000484011 AQRO60306 1485 aaKnown RBP eCLIP19.77■□□□□ 0.76
SDK1-209ENST00000484011 ERICH3Q5RHP9 1530 aa19.74■□□□□ 0.75
SDK1-209ENST00000484011 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
SDK1-209ENST00000484011 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
SDK1-209ENST00000484011 CARMIL1Q5VZK9 1371 aa19.68■□□□□ 0.74
SDK1-209ENST00000484011 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
SDK1-209ENST00000484011 CUL7Q14999 1698 aa19.65■□□□□ 0.74
SDK1-209ENST00000484011 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
SDK1-209ENST00000484011 MAGI1Q96QZ7 1491 aaPredicted RBP19.62■□□□□ 0.73
SDK1-209ENST00000484011 FHAD1B1AJZ9 1412 aa19.62■□□□□ 0.73
SDK1-209ENST00000484011 KIF21BO75037 1637 aa19.62■□□□□ 0.73
SDK1-209ENST00000484011 RAPGEF2Q9Y4G8 1499 aa19.6■□□□□ 0.73
SDK1-209ENST00000484011 SNAPC4Q5SXM2 1469 aa19.59■□□□□ 0.73
SDK1-209ENST00000484011 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
SDK1-209ENST00000484011 LOC105371045A0A1W2PR82 267 aa19.55■□□□□ 0.72
SDK1-209ENST00000484011 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
SDK1-209ENST00000484011 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
SDK1-209ENST00000484011 CHMP7Q8WUX9 453 aaPredicted RBP19.53■□□□□ 0.72
SDK1-209ENST00000484011 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
SDK1-209ENST00000484011 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
SDK1-209ENST00000484011 TNIKQ9UKE5 1360 aa19.47■□□□□ 0.71
SDK1-209ENST00000484011 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
SDK1-209ENST00000484011 FBLN2P98095 1184 aa19.46■□□□□ 0.71
SDK1-209ENST00000484011 NUP160Q12769 1436 aa19.36■□□□□ 0.69
SDK1-209ENST00000484011 KIAA0586Q9BVV6 1533 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms