RNA–Protein interactions for RNA: ENST00000483951.1

TRAF3IP1-205, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 2

Gene TRAF3IP1, Length 476 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-205ENST00000483951 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
TRAF3IP1-205ENST00000483951 CCDC180Q9P1Z9 1646 aa24.92■■□□□ 1.58
TRAF3IP1-205ENST00000483951 ABCC9O60706 1549 aa24.4■■□□□ 1.5
TRAF3IP1-205ENST00000483951 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
TRAF3IP1-205ENST00000483951 RB1CC1Q8TDY2 1594 aa23.45■■□□□ 1.34
TRAF3IP1-205ENST00000483951 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
TRAF3IP1-205ENST00000483951 NACADO15069 1562 aa23.42■■□□□ 1.34
TRAF3IP1-205ENST00000483951 MYO15BQ96JP2 1530 aa23.27■■□□□ 1.32
TRAF3IP1-205ENST00000483951 DCAF1Q9Y4B6 1507 aa23.21■■□□□ 1.31
TRAF3IP1-205ENST00000483951 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
TRAF3IP1-205ENST00000483951 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
TRAF3IP1-205ENST00000483951 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
TRAF3IP1-205ENST00000483951 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
TRAF3IP1-205ENST00000483951 SHROOM4Q9ULL8 1493 aa22.46■■□□□ 1.19
TRAF3IP1-205ENST00000483951 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
TRAF3IP1-205ENST00000483951 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
TRAF3IP1-205ENST00000483951 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.12
TRAF3IP1-205ENST00000483951 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
TRAF3IP1-205ENST00000483951 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
TRAF3IP1-205ENST00000483951 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
TRAF3IP1-205ENST00000483951 MROH2BQ7Z745 1585 aa21.68■■□□□ 1.06
TRAF3IP1-205ENST00000483951 ATAD2BQ9ULI0 1458 aa21.65■■□□□ 1.06
TRAF3IP1-205ENST00000483951 SMARCA2P51531 1590 aa21.63■■□□□ 1.05
TRAF3IP1-205ENST00000483951 NCAPD3P42695 1498 aa21.61■■□□□ 1.05
TRAF3IP1-205ENST00000483951 PEG3Q9GZU2 1588 aa21.53■■□□□ 1.04
TRAF3IP1-205ENST00000483951 HMGXB3Q12766 1538 aa21.51■■□□□ 1.03
TRAF3IP1-205ENST00000483951 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
TRAF3IP1-205ENST00000483951 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
TRAF3IP1-205ENST00000483951 WIZO95785 1651 aa21.45■■□□□ 1.02
TRAF3IP1-205ENST00000483951 TOP2AP11388 1531 aaKnown RBP21.22■□□□□ 0.99
TRAF3IP1-205ENST00000483951 NESP48681 1621 aa21.11■□□□□ 0.97
TRAF3IP1-205ENST00000483951 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
TRAF3IP1-205ENST00000483951 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
TRAF3IP1-205ENST00000483951 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
TRAF3IP1-205ENST00000483951 CADPSQ9ULU8 1353 aa21.01■□□□□ 0.95
TRAF3IP1-205ENST00000483951 CCDC88BA6NC98 1476 aa20.98■□□□□ 0.95
TRAF3IP1-205ENST00000483951 PDS5BQ9NTI5 1447 aa20.91■□□□□ 0.94
TRAF3IP1-205ENST00000483951 CFTRP13569 1480 aa20.88■□□□□ 0.93
TRAF3IP1-205ENST00000483951 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.93
TRAF3IP1-205ENST00000483951 FANCD2Q9BXW9 1451 aa20.79■□□□□ 0.92
TRAF3IP1-205ENST00000483951 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
TRAF3IP1-205ENST00000483951 THOC2Q8NI27 1593 aaKnown RBP20.74■□□□□ 0.91
TRAF3IP1-205ENST00000483951 CUX2O14529 1486 aa20.71■□□□□ 0.91
TRAF3IP1-205ENST00000483951 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
TRAF3IP1-205ENST00000483951 MRC2Q9UBG0 1479 aa20.7■□□□□ 0.9
TRAF3IP1-205ENST00000483951 WDR62O43379 1518 aa20.6■□□□□ 0.89
TRAF3IP1-205ENST00000483951 URB2Q14146 1524 aaKnown RBP20.57■□□□□ 0.88
TRAF3IP1-205ENST00000483951 TOPBP1Q92547 1522 aa20.45■□□□□ 0.86
TRAF3IP1-205ENST00000483951 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
TRAF3IP1-205ENST00000483951 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
TRAF3IP1-205ENST00000483951 CUX1P39880 1505 aa20.33■□□□□ 0.85
TRAF3IP1-205ENST00000483951 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
TRAF3IP1-205ENST00000483951 POLA1P09884 1462 aaPredicted RBP20.29■□□□□ 0.84
TRAF3IP1-205ENST00000483951 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
TRAF3IP1-205ENST00000483951 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
TRAF3IP1-205ENST00000483951 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
TRAF3IP1-205ENST00000483951 SOGA1O94964 1423 aa20.22■□□□□ 0.83
TRAF3IP1-205ENST00000483951 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
TRAF3IP1-205ENST00000483951 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
TRAF3IP1-205ENST00000483951 SYNJ1O43426 1573 aa20.18■□□□□ 0.82
TRAF3IP1-205ENST00000483951 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
TRAF3IP1-205ENST00000483951 BIVM-ERCC5R4GMW8 1640 aa20.15■□□□□ 0.82
TRAF3IP1-205ENST00000483951 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
TRAF3IP1-205ENST00000483951 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.81
TRAF3IP1-205ENST00000483951 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
TRAF3IP1-205ENST00000483951 ABCA10Q8WWZ4 1543 aa20.04■□□□□ 0.8
TRAF3IP1-205ENST00000483951 WDR97A6NE52 1622 aa20.04■□□□□ 0.8
TRAF3IP1-205ENST00000483951 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
TRAF3IP1-205ENST00000483951 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
TRAF3IP1-205ENST00000483951 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
TRAF3IP1-205ENST00000483951 ABCA5Q8WWZ7 1642 aa19.95■□□□□ 0.78
TRAF3IP1-205ENST00000483951 SNAPC4Q5SXM2 1469 aa19.94■□□□□ 0.78
TRAF3IP1-205ENST00000483951 FBLN2P98095 1184 aa19.93■□□□□ 0.78
TRAF3IP1-205ENST00000483951 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
TRAF3IP1-205ENST00000483951 OSCARQ8IYS5 282 aa19.91■□□□□ 0.78
TRAF3IP1-205ENST00000483951 MAGI1Q96QZ7 1491 aaPredicted RBP19.89■□□□□ 0.77
TRAF3IP1-205ENST00000483951 TRIM41Q8WV44 630 aa19.86■□□□□ 0.77
TRAF3IP1-205ENST00000483951 CHD1O14646 1710 aa19.85■□□□□ 0.77
TRAF3IP1-205ENST00000483951 CHMP7Q8WUX9 453 aaPredicted RBP19.85■□□□□ 0.77
TRAF3IP1-205ENST00000483951 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
TRAF3IP1-205ENST00000483951 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
TRAF3IP1-205ENST00000483951 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
TRAF3IP1-205ENST00000483951 ADAMTS12P58397 1594 aa19.77■□□□□ 0.76
TRAF3IP1-205ENST00000483951 FHAD1B1AJZ9 1412 aa19.75■□□□□ 0.75
TRAF3IP1-205ENST00000483951 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
TRAF3IP1-205ENST00000483951 IGF1RP08069 1367 aa19.7■□□□□ 0.74
TRAF3IP1-205ENST00000483951 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
TRAF3IP1-205ENST00000483951 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
TRAF3IP1-205ENST00000483951 CUL7Q14999 1698 aa19.64■□□□□ 0.73
TRAF3IP1-205ENST00000483951 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
TRAF3IP1-205ENST00000483951 CARMIL1Q5VZK9 1371 aa19.61■□□□□ 0.73
TRAF3IP1-205ENST00000483951 CEP170Q5SW79 1584 aa19.6■□□□□ 0.73
TRAF3IP1-205ENST00000483951 NUP160Q12769 1436 aa19.59■□□□□ 0.73
TRAF3IP1-205ENST00000483951 ARHGEF11O15085 1522 aa19.57■□□□□ 0.72
TRAF3IP1-205ENST00000483951 RIMBP3CA6NJZ7 1639 aa19.56■□□□□ 0.72
TRAF3IP1-205ENST00000483951 RIMBP3BA6NNM3 1639 aa19.56■□□□□ 0.72
TRAF3IP1-205ENST00000483951 RIMBP3Q9UFD9 1639 aa19.56■□□□□ 0.72
TRAF3IP1-205ENST00000483951 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
TRAF3IP1-205ENST00000483951 RAPGEF2Q9Y4G8 1499 aa19.5■□□□□ 0.71
TRAF3IP1-205ENST00000483951 FAM9AQ8IZU1 332 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms