RNA–Protein interactions for RNA: ENST00000483787.5

FAM3D-203, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 5

Gene FAM3D, Length 737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-203ENST00000483787 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
FAM3D-203ENST00000483787 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
FAM3D-203ENST00000483787 ABCC9O60706 1549 aa24.65■■□□□ 1.54
FAM3D-203ENST00000483787 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
FAM3D-203ENST00000483787 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
FAM3D-203ENST00000483787 RB1CC1Q8TDY2 1594 aa23.71■■□□□ 1.39
FAM3D-203ENST00000483787 NACADO15069 1562 aa23.7■■□□□ 1.38
FAM3D-203ENST00000483787 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
FAM3D-203ENST00000483787 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
FAM3D-203ENST00000483787 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
FAM3D-203ENST00000483787 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
FAM3D-203ENST00000483787 PABPN1Q86U42 306 aaKnown RBP eCLIP23.06■■□□□ 1.28
FAM3D-203ENST00000483787 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
FAM3D-203ENST00000483787 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
FAM3D-203ENST00000483787 DNAJC5BQ9UF47 199 aa22.51■■□□□ 1.19
FAM3D-203ENST00000483787 EIF4G1Q04637 1599 aaKnown RBP22.4■■□□□ 1.18
FAM3D-203ENST00000483787 CC2D2AQ9P2K1 1620 aa22.28■■□□□ 1.16
FAM3D-203ENST00000483787 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
FAM3D-203ENST00000483787 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
FAM3D-203ENST00000483787 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
FAM3D-203ENST00000483787 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
FAM3D-203ENST00000483787 ATAD2BQ9ULI0 1458 aa21.94■■□□□ 1.1
FAM3D-203ENST00000483787 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
FAM3D-203ENST00000483787 NCAPD3P42695 1498 aa21.88■■□□□ 1.09
FAM3D-203ENST00000483787 PEG3Q9GZU2 1588 aa21.84■■□□□ 1.09
FAM3D-203ENST00000483787 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
FAM3D-203ENST00000483787 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.07
FAM3D-203ENST00000483787 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
FAM3D-203ENST00000483787 WIZO95785 1651 aa21.75■■□□□ 1.07
FAM3D-203ENST00000483787 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
FAM3D-203ENST00000483787 NESP48681 1621 aa21.37■■□□□ 1.01
FAM3D-203ENST00000483787 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
FAM3D-203ENST00000483787 LAMC3Q9Y6N6 1575 aa21.28■■□□□ 1
FAM3D-203ENST00000483787 CCDC88BA6NC98 1476 aa21.26■□□□□ 0.99
FAM3D-203ENST00000483787 CADPSQ9ULU8 1353 aa21.26■□□□□ 0.99
FAM3D-203ENST00000483787 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
FAM3D-203ENST00000483787 CFTRP13569 1480 aa21.16■□□□□ 0.98
FAM3D-203ENST00000483787 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.98
FAM3D-203ENST00000483787 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
FAM3D-203ENST00000483787 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
FAM3D-203ENST00000483787 THOC2Q8NI27 1593 aaKnown RBP21■□□□□ 0.95
FAM3D-203ENST00000483787 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
FAM3D-203ENST00000483787 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
FAM3D-203ENST00000483787 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
FAM3D-203ENST00000483787 CUX2O14529 1486 aa20.92■□□□□ 0.94
FAM3D-203ENST00000483787 WDR62O43379 1518 aa20.86■□□□□ 0.93
FAM3D-203ENST00000483787 URB2Q14146 1524 aaKnown RBP20.83■□□□□ 0.92
FAM3D-203ENST00000483787 TOPBP1Q92547 1522 aa20.71■□□□□ 0.91
FAM3D-203ENST00000483787 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
FAM3D-203ENST00000483787 ABCC8Q09428 1581 aa20.66■□□□□ 0.9
FAM3D-203ENST00000483787 CUX1P39880 1505 aa20.61■□□□□ 0.89
FAM3D-203ENST00000483787 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
FAM3D-203ENST00000483787 IFT140Q96RY7 1462 aa20.54■□□□□ 0.88
FAM3D-203ENST00000483787 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
FAM3D-203ENST00000483787 WRNQ14191 1432 aaPredicted RBP eCLIP20.52■□□□□ 0.87
FAM3D-203ENST00000483787 RAD54L2Q9Y4B4 1467 aa20.48■□□□□ 0.87
FAM3D-203ENST00000483787 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
FAM3D-203ENST00000483787 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
FAM3D-203ENST00000483787 TARBP1Q13395 1621 aaKnown RBP20.46■□□□□ 0.87
FAM3D-203ENST00000483787 SOGA1O94964 1423 aa20.45■□□□□ 0.86
FAM3D-203ENST00000483787 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
FAM3D-203ENST00000483787 BIVM-ERCC5R4GMW8 1640 aa20.44■□□□□ 0.86
FAM3D-203ENST00000483787 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
FAM3D-203ENST00000483787 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.85
FAM3D-203ENST00000483787 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
FAM3D-203ENST00000483787 WDR97A6NE52 1622 aa20.33■□□□□ 0.84
FAM3D-203ENST00000483787 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
FAM3D-203ENST00000483787 ABCA5Q8WWZ7 1642 aa20.23■□□□□ 0.83
FAM3D-203ENST00000483787 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
FAM3D-203ENST00000483787 GRIN2BQ13224 1484 aa20.19■□□□□ 0.82
FAM3D-203ENST00000483787 SNAPC4Q5SXM2 1469 aa20.18■□□□□ 0.82
FAM3D-203ENST00000483787 PBRM1Q86U86 1689 aa20.17■□□□□ 0.82
FAM3D-203ENST00000483787 DNAJC5Q9H3Z4 198 aa20.14■□□□□ 0.81
FAM3D-203ENST00000483787 MAGI1Q96QZ7 1491 aaPredicted RBP20.12■□□□□ 0.81
FAM3D-203ENST00000483787 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
FAM3D-203ENST00000483787 FBLN2P98095 1184 aa20.1■□□□□ 0.81
FAM3D-203ENST00000483787 CHD1O14646 1710 aa20.1■□□□□ 0.81
FAM3D-203ENST00000483787 OSCARQ8IYS5 282 aa20.08■□□□□ 0.81
FAM3D-203ENST00000483787 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
FAM3D-203ENST00000483787 ERICH3Q5RHP9 1530 aa20.06■□□□□ 0.8
FAM3D-203ENST00000483787 SYNJ2O15056 1496 aa20.05■□□□□ 0.8
FAM3D-203ENST00000483787 CHMP7Q8WUX9 453 aaPredicted RBP20.04■□□□□ 0.8
FAM3D-203ENST00000483787 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
FAM3D-203ENST00000483787 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
FAM3D-203ENST00000483787 IGF1RP08069 1367 aa19.97■□□□□ 0.79
FAM3D-203ENST00000483787 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
FAM3D-203ENST00000483787 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
FAM3D-203ENST00000483787 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
FAM3D-203ENST00000483787 CUL7Q14999 1698 aa19.9■□□□□ 0.78
FAM3D-203ENST00000483787 CLASP1Q7Z460 1538 aa19.87■□□□□ 0.77
FAM3D-203ENST00000483787 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
FAM3D-203ENST00000483787 CEP170Q5SW79 1584 aa19.86■□□□□ 0.77
FAM3D-203ENST00000483787 NUP160Q12769 1436 aa19.85■□□□□ 0.77
FAM3D-203ENST00000483787 ARHGEF11O15085 1522 aa19.78■□□□□ 0.76
FAM3D-203ENST00000483787 RIMBP3CA6NJZ7 1639 aa19.77■□□□□ 0.76
FAM3D-203ENST00000483787 RIMBP3BA6NNM3 1639 aa19.77■□□□□ 0.76
FAM3D-203ENST00000483787 RIMBP3Q9UFD9 1639 aa19.77■□□□□ 0.76
FAM3D-203ENST00000483787 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
FAM3D-203ENST00000483787 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
FAM3D-203ENST00000483787 EEA1Q15075 1411 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms