RNA–Protein interactions for RNA: ENST00000483136.1

CACNA1C-226, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-226ENST00000483136 NISCHQ9Y2I1 1504 aa15.07■□□□□ 0
CACNA1C-226ENST00000483136 ABCC9O60706 1549 aa14.75□□□□□ -0.05
CACNA1C-226ENST00000483136 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
CACNA1C-226ENST00000483136 DNAJC5Q9H3Z4 198 aa14.32□□□□□ -0.12
CACNA1C-226ENST00000483136 CCDC180Q9P1Z9 1646 aa13.91□□□□□ -0.18
CACNA1C-226ENST00000483136 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
CACNA1C-226ENST00000483136 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
CACNA1C-226ENST00000483136 CECR2Q9BXF3 1484 aa13.46□□□□□ -0.25
CACNA1C-226ENST00000483136 NACADO15069 1562 aa13.45□□□□□ -0.26
CACNA1C-226ENST00000483136 CC2D2AQ9P2K1 1620 aa13.28□□□□□ -0.28
CACNA1C-226ENST00000483136 CUX2O14529 1486 aa13.23□□□□□ -0.29
CACNA1C-226ENST00000483136 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
CACNA1C-226ENST00000483136 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
CACNA1C-226ENST00000483136 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
CACNA1C-226ENST00000483136 SHROOM4Q9ULL8 1493 aa13.2□□□□□ -0.3
CACNA1C-226ENST00000483136 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
CACNA1C-226ENST00000483136 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-226ENST00000483136 MYO15BQ96JP2 1530 aa13.02□□□□□ -0.33
CACNA1C-226ENST00000483136 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
CACNA1C-226ENST00000483136 AEBP2Q6ZN18 517 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-226ENST00000483136 SCRIBQ14160 1630 aa12.61□□□□□ -0.39
CACNA1C-226ENST00000483136 OSCARQ8IYS5 282 aa12.58□□□□□ -0.4
CACNA1C-226ENST00000483136 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
CACNA1C-226ENST00000483136 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-226ENST00000483136 NCAPD3P42695 1498 aa12.45□□□□□ -0.42
CACNA1C-226ENST00000483136 THOC2Q8NI27 1593 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-226ENST00000483136 NESP48681 1621 aa12.35□□□□□ -0.43
CACNA1C-226ENST00000483136 ILDR1Q86SU0 546 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-226ENST00000483136 PDS5BQ9NTI5 1447 aa12.33□□□□□ -0.44
CACNA1C-226ENST00000483136 BAZ1AQ9NRL2 1556 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-226ENST00000483136 CHIC1Q5VXU3 224 aa12.29□□□□□ -0.44
CACNA1C-226ENST00000483136 LAMC3Q9Y6N6 1575 aa12.27□□□□□ -0.44
CACNA1C-226ENST00000483136 CYB5RLQ6IPT4 315 aa12.26□□□□□ -0.45
CACNA1C-226ENST00000483136 RIMBP3CA6NJZ7 1639 aa12.26□□□□□ -0.45
CACNA1C-226ENST00000483136 RIMBP3BA6NNM3 1639 aa12.26□□□□□ -0.45
CACNA1C-226ENST00000483136 RIMBP3Q9UFD9 1639 aa12.26□□□□□ -0.45
CACNA1C-226ENST00000483136 SMARCA2P51531 1590 aa12.25□□□□□ -0.45
CACNA1C-226ENST00000483136 ZCCHC6Q5VYS8 1495 aaKnown RBP12.24□□□□□ -0.45
CACNA1C-226ENST00000483136 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.46
CACNA1C-226ENST00000483136 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
CACNA1C-226ENST00000483136 ARHGEF11O15085 1522 aa12.17□□□□□ -0.46
CACNA1C-226ENST00000483136 MRC2Q9UBG0 1479 aa12.16□□□□□ -0.46
CACNA1C-226ENST00000483136 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
CACNA1C-226ENST00000483136 WDR62O43379 1518 aa12.11□□□□□ -0.47
CACNA1C-226ENST00000483136 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-226ENST00000483136 CADPSQ9ULU8 1353 aa12.03□□□□□ -0.48
CACNA1C-226ENST00000483136 ARAP1Q96P48 1450 aa11.95□□□□□ -0.5
CACNA1C-226ENST00000483136 RSF1Q96T23 1441 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-226ENST00000483136 CEP164Q9UPV0 1460 aa11.94□□□□□ -0.5
CACNA1C-226ENST00000483136 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
CACNA1C-226ENST00000483136 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
CACNA1C-226ENST00000483136 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
CACNA1C-226ENST00000483136 FBXO41Q8TF61 875 aa11.81□□□□□ -0.52
CACNA1C-226ENST00000483136 IFT140Q96RY7 1462 aa11.77□□□□□ -0.52
CACNA1C-226ENST00000483136 FBLN2P98095 1184 aa11.76□□□□□ -0.53
CACNA1C-226ENST00000483136 KDM4FA0A1W2PPD8 638 aa11.74□□□□□ -0.53
CACNA1C-226ENST00000483136 SOCS7O14512 581 aa11.72□□□□□ -0.53
CACNA1C-226ENST00000483136 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-226ENST00000483136 LMTK3Q96Q04 1460 aa11.7□□□□□ -0.54
CACNA1C-226ENST00000483136 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-226ENST00000483136 ERCC6L2Q5T890 1561 aa11.68□□□□□ -0.54
CACNA1C-226ENST00000483136 CFTRP13569 1480 aa11.65□□□□□ -0.54
CACNA1C-226ENST00000483136 CHD1O14646 1710 aa11.63□□□□□ -0.55
CACNA1C-226ENST00000483136 CHMP7Q8WUX9 453 aaPredicted RBP11.58□□□□□ -0.56
CACNA1C-226ENST00000483136 ABCC8Q09428 1581 aa11.58□□□□□ -0.56
CACNA1C-226ENST00000483136 GAPVD1Q14C86 1478 aa11.57□□□□□ -0.56
CACNA1C-226ENST00000483136 EIF4G3O43432 1585 aaKnown RBP11.57□□□□□ -0.56
CACNA1C-226ENST00000483136 MROH2BQ7Z745 1585 aa11.56□□□□□ -0.56
CACNA1C-226ENST00000483136 SYNJ1O43426 1573 aa11.55□□□□□ -0.56
CACNA1C-226ENST00000483136 AQRO60306 1485 aaKnown RBP eCLIP11.54□□□□□ -0.56
CACNA1C-226ENST00000483136 CLASP1Q7Z460 1538 aa11.54□□□□□ -0.56
CACNA1C-226ENST00000483136 HECW2Q9P2P5 1572 aa11.49□□□□□ -0.57
CACNA1C-226ENST00000483136 FAM69CQ0P6D2 419 aa11.48□□□□□ -0.57
CACNA1C-226ENST00000483136 TOPBP1Q92547 1522 aa11.46□□□□□ -0.57
CACNA1C-226ENST00000483136 DISP3Q9P2K9 1392 aa11.45□□□□□ -0.58
CACNA1C-226ENST00000483136 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
CACNA1C-226ENST00000483136 ILDR2Q71H61 639 aa11.44□□□□□ -0.58
CACNA1C-226ENST00000483136 SYNJ2O15056 1496 aa11.44□□□□□ -0.58
CACNA1C-226ENST00000483136 KIF13AQ9H1H9 1805 aa11.42□□□□□ -0.58
CACNA1C-226ENST00000483136 KDM6BO15054 1643 aa11.42□□□□□ -0.58
CACNA1C-226ENST00000483136 MAGI1Q96QZ7 1491 aaPredicted RBP11.4□□□□□ -0.58
CACNA1C-226ENST00000483136 ABCC10Q5T3U5 1492 aa11.39□□□□□ -0.59
CACNA1C-226ENST00000483136 TARBP1Q13395 1621 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-226ENST00000483136 ADGRL1O94910 1474 aa11.38□□□□□ -0.59
CACNA1C-226ENST00000483136 SNAPC4Q5SXM2 1469 aa11.37□□□□□ -0.59
CACNA1C-226ENST00000483136 WDR97A6NE52 1622 aa11.36□□□□□ -0.59
CACNA1C-226ENST00000483136 DNMBPQ6XZF7 1577 aa11.35□□□□□ -0.59
CACNA1C-226ENST00000483136 TDRD9Q8NDG6 1382 aaKnown RBP11.34□□□□□ -0.59
CACNA1C-226ENST00000483136 PRDM2Q13029 1718 aa11.34□□□□□ -0.59
CACNA1C-226ENST00000483136 SOGA1O94964 1423 aa11.31□□□□□ -0.6
CACNA1C-226ENST00000483136 GRIN2BQ13224 1484 aa11.31□□□□□ -0.6
CACNA1C-226ENST00000483136 WIZO95785 1651 aa11.29□□□□□ -0.6
CACNA1C-226ENST00000483136 POLA1P09884 1462 aaPredicted RBP11.28□□□□□ -0.6
CACNA1C-226ENST00000483136 MAPKBP1O60336 1514 aa11.26□□□□□ -0.61
CACNA1C-226ENST00000483136 TOP2BQ02880 1626 aa11.23□□□□□ -0.61
CACNA1C-226ENST00000483136 DIP2BQ9P265 1576 aa11.22□□□□□ -0.61
CACNA1C-226ENST00000483136 RAD54L2Q9Y4B4 1467 aa11.22□□□□□ -0.61
CACNA1C-226ENST00000483136 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
CACNA1C-226ENST00000483136 CEP170Q5SW79 1584 aa11.2□□□□□ -0.62
CACNA1C-226ENST00000483136 TOP2AP11388 1531 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms