RNA–Protein interactions for RNA: ENST00000483067.1

SP110-211, Transcript of SP110 nuclear body protein, humanhuman

TSL 2

Gene SP110, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP110-211ENST00000483067 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
SP110-211ENST00000483067 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
SP110-211ENST00000483067 ABCC9O60706 1549 aa23.92■■□□□ 1.42
SP110-211ENST00000483067 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
SP110-211ENST00000483067 RB1CC1Q8TDY2 1594 aa22.83■■□□□ 1.25
SP110-211ENST00000483067 NACADO15069 1562 aa22.72■■□□□ 1.23
SP110-211ENST00000483067 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
SP110-211ENST00000483067 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
SP110-211ENST00000483067 PABPN1Q86U42 306 aaKnown RBP eCLIP22.37■■□□□ 1.17
SP110-211ENST00000483067 UNC13AQ9UPW8 1703 aa22.35■■□□□ 1.17
SP110-211ENST00000483067 DCAF1Q9Y4B6 1507 aa22.32■■□□□ 1.16
SP110-211ENST00000483067 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
SP110-211ENST00000483067 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
SP110-211ENST00000483067 DNAJC5BQ9UF47 199 aa22.08■■□□□ 1.13
SP110-211ENST00000483067 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.08
SP110-211ENST00000483067 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
SP110-211ENST00000483067 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.04
SP110-211ENST00000483067 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
SP110-211ENST00000483067 SMARCA4P51532 1647 aa21.1■□□□□ 0.97
SP110-211ENST00000483067 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.96
SP110-211ENST00000483067 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
SP110-211ENST00000483067 NCAPD3P42695 1498 aa20.96■□□□□ 0.95
SP110-211ENST00000483067 MROH2BQ7Z745 1585 aa20.95■□□□□ 0.94
SP110-211ENST00000483067 SMARCA2P51531 1590 aa20.94■□□□□ 0.94
SP110-211ENST00000483067 BAZ1BQ9UIG0 1483 aaKnown RBP20.86■□□□□ 0.93
SP110-211ENST00000483067 HMGXB3Q12766 1538 aa20.85■□□□□ 0.93
SP110-211ENST00000483067 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
SP110-211ENST00000483067 WIZO95785 1651 aa20.75■□□□□ 0.91
SP110-211ENST00000483067 NESP48681 1621 aa20.66■□□□□ 0.9
SP110-211ENST00000483067 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
SP110-211ENST00000483067 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
SP110-211ENST00000483067 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
SP110-211ENST00000483067 TOP2AP11388 1531 aaKnown RBP20.45■□□□□ 0.86
SP110-211ENST00000483067 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
SP110-211ENST00000483067 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
SP110-211ENST00000483067 PDS5BQ9NTI5 1447 aa20.35■□□□□ 0.85
SP110-211ENST00000483067 CUX2O14529 1486 aa20.34■□□□□ 0.85
SP110-211ENST00000483067 THOC2Q8NI27 1593 aaKnown RBP20.3■□□□□ 0.84
SP110-211ENST00000483067 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
SP110-211ENST00000483067 CFTRP13569 1480 aa20.22■□□□□ 0.83
SP110-211ENST00000483067 FANCD2Q9BXW9 1451 aa20.19■□□□□ 0.82
SP110-211ENST00000483067 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
SP110-211ENST00000483067 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
SP110-211ENST00000483067 SUPT5HO00267 1087 aaKnown RBP20.14■□□□□ 0.81
SP110-211ENST00000483067 WDR62O43379 1518 aa20.09■□□□□ 0.81
SP110-211ENST00000483067 PRDM2Q13029 1718 aa20.06■□□□□ 0.8
SP110-211ENST00000483067 URB2Q14146 1524 aaKnown RBP20.01■□□□□ 0.79
SP110-211ENST00000483067 DNAJC5Q9H3Z4 198 aa19.94■□□□□ 0.78
SP110-211ENST00000483067 TOPBP1Q92547 1522 aa19.85■□□□□ 0.77
SP110-211ENST00000483067 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
SP110-211ENST00000483067 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
SP110-211ENST00000483067 ZNF608Q9ULD9 1512 aaPredicted RBP19.74■□□□□ 0.75
SP110-211ENST00000483067 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
SP110-211ENST00000483067 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
SP110-211ENST00000483067 CUX1P39880 1505 aa19.66■□□□□ 0.74
SP110-211ENST00000483067 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
SP110-211ENST00000483067 EIF4G3O43432 1585 aaKnown RBP19.63■□□□□ 0.73
SP110-211ENST00000483067 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
SP110-211ENST00000483067 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
SP110-211ENST00000483067 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.73
SP110-211ENST00000483067 SOGA1O94964 1423 aa19.59■□□□□ 0.73
SP110-211ENST00000483067 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
SP110-211ENST00000483067 OSCARQ8IYS5 282 aa19.53■□□□□ 0.72
SP110-211ENST00000483067 FBLN2P98095 1184 aa19.48■□□□□ 0.71
SP110-211ENST00000483067 WRNQ14191 1432 aaPredicted RBP eCLIP19.47■□□□□ 0.71
SP110-211ENST00000483067 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
SP110-211ENST00000483067 CHD1O14646 1710 aa19.43■□□□□ 0.7
SP110-211ENST00000483067 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
SP110-211ENST00000483067 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
SP110-211ENST00000483067 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
SP110-211ENST00000483067 BIVM-ERCC5R4GMW8 1640 aa19.4■□□□□ 0.7
SP110-211ENST00000483067 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
SP110-211ENST00000483067 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
SP110-211ENST00000483067 GRIN2BQ13224 1484 aa19.36■□□□□ 0.69
SP110-211ENST00000483067 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
SP110-211ENST00000483067 PBRM1Q86U86 1689 aa19.35■□□□□ 0.69
SP110-211ENST00000483067 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.68
SP110-211ENST00000483067 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
SP110-211ENST00000483067 MAGI1Q96QZ7 1491 aaPredicted RBP19.29■□□□□ 0.68
SP110-211ENST00000483067 RIMBP3CA6NJZ7 1639 aa19.26■□□□□ 0.67
SP110-211ENST00000483067 RIMBP3BA6NNM3 1639 aa19.26■□□□□ 0.67
SP110-211ENST00000483067 RIMBP3Q9UFD9 1639 aa19.26■□□□□ 0.67
SP110-211ENST00000483067 SYNJ2O15056 1496 aa19.25■□□□□ 0.67
SP110-211ENST00000483067 ARHGEF11O15085 1522 aa19.23■□□□□ 0.67
SP110-211ENST00000483067 ADAMTS12P58397 1594 aa19.18■□□□□ 0.66
SP110-211ENST00000483067 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
SP110-211ENST00000483067 ERICH3Q5RHP9 1530 aa19.12■□□□□ 0.65
SP110-211ENST00000483067 GRIN2AQ12879 1464 aa19.12■□□□□ 0.65
SP110-211ENST00000483067 CYB5RLQ6IPT4 315 aa19.12■□□□□ 0.65
SP110-211ENST00000483067 FHAD1B1AJZ9 1412 aa19.1■□□□□ 0.65
SP110-211ENST00000483067 AEBP2Q6ZN18 517 aaPredicted RBP19.07■□□□□ 0.64
SP110-211ENST00000483067 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
SP110-211ENST00000483067 KIF27Q86VH2 1401 aa19.06■□□□□ 0.64
SP110-211ENST00000483067 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
SP110-211ENST00000483067 NUP160Q12769 1436 aa19■□□□□ 0.63
SP110-211ENST00000483067 IGF1RP08069 1367 aa18.99■□□□□ 0.63
SP110-211ENST00000483067 ERCC6L2Q5T890 1561 aa18.97■□□□□ 0.63
SP110-211ENST00000483067 CUL7Q14999 1698 aa18.94■□□□□ 0.62
SP110-211ENST00000483067 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
SP110-211ENST00000483067 CARMIL1Q5VZK9 1371 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms