RNA–Protein interactions for RNA: ENST00000482854.5

TRAF2-208, Transcript of TNF receptor associated factor 2, humanhuman

TSL 5

Gene TRAF2, Length 852 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF2-208ENST00000482854 NISCHQ9Y2I1 1504 aa37.15■■■■□ 3.54
TRAF2-208ENST00000482854 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
TRAF2-208ENST00000482854 ABCC9O60706 1549 aa32.26■■■□□ 2.76
TRAF2-208ENST00000482854 DCAF8L2P0C7V8 631 aa31.11■■■□□ 2.57
TRAF2-208ENST00000482854 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
TRAF2-208ENST00000482854 NACADO15069 1562 aa30.99■■■□□ 2.55
TRAF2-208ENST00000482854 ZCCHC6Q5VYS8 1495 aaKnown RBP30.97■■■□□ 2.55
TRAF2-208ENST00000482854 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
TRAF2-208ENST00000482854 DCAF1Q9Y4B6 1507 aa30.69■■■□□ 2.5
TRAF2-208ENST00000482854 UNC13AQ9UPW8 1703 aa30.29■■■□□ 2.44
TRAF2-208ENST00000482854 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
TRAF2-208ENST00000482854 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.42
TRAF2-208ENST00000482854 BICRAQ9NZM4 1560 aa30.06■■■□□ 2.4
TRAF2-208ENST00000482854 SHROOM4Q9ULL8 1493 aa29.73■■■□□ 2.35
TRAF2-208ENST00000482854 DNAJC5BQ9UF47 199 aa29.47■■■□□ 2.31
TRAF2-208ENST00000482854 EIF4G1Q04637 1599 aaKnown RBP29.27■■■□□ 2.28
TRAF2-208ENST00000482854 CC2D2AQ9P2K1 1620 aa29.14■■■□□ 2.26
TRAF2-208ENST00000482854 CECR2Q9BXF3 1484 aa28.96■■■□□ 2.23
TRAF2-208ENST00000482854 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
TRAF2-208ENST00000482854 BAZ1AQ9NRL2 1556 aaPredicted RBP28.8■■■□□ 2.2
TRAF2-208ENST00000482854 MROH2BQ7Z745 1585 aa28.66■■■□□ 2.18
TRAF2-208ENST00000482854 ATAD2BQ9ULI0 1458 aa28.64■■■□□ 2.17
TRAF2-208ENST00000482854 SMARCA2P51531 1590 aa28.61■■■□□ 2.17
TRAF2-208ENST00000482854 NCAPD3P42695 1498 aa28.58■■■□□ 2.17
TRAF2-208ENST00000482854 PEG3Q9GZU2 1588 aa28.49■■■□□ 2.15
TRAF2-208ENST00000482854 HMGXB3Q12766 1538 aa28.47■■■□□ 2.15
TRAF2-208ENST00000482854 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
TRAF2-208ENST00000482854 WIZO95785 1651 aa28.35■■■□□ 2.13
TRAF2-208ENST00000482854 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
TRAF2-208ENST00000482854 TOP2AP11388 1531 aaKnown RBP28.06■■■□□ 2.08
TRAF2-208ENST00000482854 NESP48681 1621 aa27.92■■■□□ 2.06
TRAF2-208ENST00000482854 LAMC3Q9Y6N6 1575 aa27.83■■■□□ 2.05
TRAF2-208ENST00000482854 ERCC6Q03468 1493 aa27.82■■■□□ 2.04
TRAF2-208ENST00000482854 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
TRAF2-208ENST00000482854 CADPSQ9ULU8 1353 aa27.77■■■□□ 2.04
TRAF2-208ENST00000482854 CCDC88BA6NC98 1476 aa27.72■■■□□ 2.03
TRAF2-208ENST00000482854 PDS5BQ9NTI5 1447 aa27.66■■■□□ 2.02
TRAF2-208ENST00000482854 CFTRP13569 1480 aa27.62■■■□□ 2.01
TRAF2-208ENST00000482854 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
TRAF2-208ENST00000482854 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
TRAF2-208ENST00000482854 THOC2Q8NI27 1593 aaKnown RBP27.46■■□□□ 1.99
TRAF2-208ENST00000482854 CEP164Q9UPV0 1460 aa27.45■■□□□ 1.99
TRAF2-208ENST00000482854 CUX2O14529 1486 aa27.42■■□□□ 1.98
TRAF2-208ENST00000482854 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
TRAF2-208ENST00000482854 MRC2Q9UBG0 1479 aa27.38■■□□□ 1.97
TRAF2-208ENST00000482854 WDR62O43379 1518 aa27.26■■□□□ 1.96
TRAF2-208ENST00000482854 URB2Q14146 1524 aaKnown RBP27.2■■□□□ 1.94
TRAF2-208ENST00000482854 TOPBP1Q92547 1522 aa27.05■■□□□ 1.92
TRAF2-208ENST00000482854 ABCC8Q09428 1581 aa27.02■■□□□ 1.92
TRAF2-208ENST00000482854 DNMBPQ6XZF7 1577 aa27.02■■□□□ 1.92
TRAF2-208ENST00000482854 CUX1P39880 1505 aa26.88■■□□□ 1.89
TRAF2-208ENST00000482854 IFT140Q96RY7 1462 aa26.85■■□□□ 1.89
TRAF2-208ENST00000482854 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
TRAF2-208ENST00000482854 FGD5Q6ZNL6 1462 aa26.8■■□□□ 1.88
TRAF2-208ENST00000482854 WRNQ14191 1432 aaPredicted RBP eCLIP26.75■■□□□ 1.87
TRAF2-208ENST00000482854 ZNF608Q9ULD9 1512 aaPredicted RBP26.74■■□□□ 1.87
TRAF2-208ENST00000482854 RAD54L2Q9Y4B4 1467 aa26.73■■□□□ 1.87
TRAF2-208ENST00000482854 SOGA1O94964 1423 aa26.73■■□□□ 1.87
TRAF2-208ENST00000482854 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
TRAF2-208ENST00000482854 SYNJ1O43426 1573 aa26.68■■□□□ 1.86
TRAF2-208ENST00000482854 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
TRAF2-208ENST00000482854 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
TRAF2-208ENST00000482854 EIF4G3O43432 1585 aaKnown RBP26.64■■□□□ 1.86
TRAF2-208ENST00000482854 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.855e-7■■■■■ 34.8
TRAF2-208ENST00000482854 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.84
TRAF2-208ENST00000482854 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
TRAF2-208ENST00000482854 ABCA10Q8WWZ4 1543 aa26.5■■□□□ 1.83
TRAF2-208ENST00000482854 DNAJC5Q9H3Z4 198 aa26.46■■□□□ 1.83
TRAF2-208ENST00000482854 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
TRAF2-208ENST00000482854 GRIN2BQ13224 1484 aa26.4■■□□□ 1.82
TRAF2-208ENST00000482854 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.82
TRAF2-208ENST00000482854 SNAPC4Q5SXM2 1469 aa26.37■■□□□ 1.81
TRAF2-208ENST00000482854 PBRM1Q86U86 1689 aa26.35■■□□□ 1.81
TRAF2-208ENST00000482854 FBLN2P98095 1184 aa26.33■■□□□ 1.81
TRAF2-208ENST00000482854 OSCARQ8IYS5 282 aa26.32■■□□□ 1.8
TRAF2-208ENST00000482854 MAGI1Q96QZ7 1491 aaPredicted RBP26.31■■□□□ 1.8
TRAF2-208ENST00000482854 CHD1O14646 1710 aa26.28■■□□□ 1.8
TRAF2-208ENST00000482854 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
TRAF2-208ENST00000482854 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
TRAF2-208ENST00000482854 SYNJ2O15056 1496 aa26.21■■□□□ 1.79
TRAF2-208ENST00000482854 KIF27Q86VH2 1401 aa26.19■■□□□ 1.78
TRAF2-208ENST00000482854 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
TRAF2-208ENST00000482854 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
TRAF2-208ENST00000482854 FHAD1B1AJZ9 1412 aa26.11■■□□□ 1.77
TRAF2-208ENST00000482854 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
TRAF2-208ENST00000482854 IGF1RP08069 1367 aa26.04■■□□□ 1.76
TRAF2-208ENST00000482854 CUL7Q14999 1698 aa25.98■■□□□ 1.75
TRAF2-208ENST00000482854 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
TRAF2-208ENST00000482854 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
TRAF2-208ENST00000482854 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
TRAF2-208ENST00000482854 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
TRAF2-208ENST00000482854 NUP160Q12769 1436 aa25.91■■□□□ 1.74
TRAF2-208ENST00000482854 CARMIL1Q5VZK9 1371 aa25.91■■□□□ 1.74
TRAF2-208ENST00000482854 ARHGEF11O15085 1522 aa25.9■■□□□ 1.74
TRAF2-208ENST00000482854 RIMBP3CA6NJZ7 1639 aa25.89■■□□□ 1.74
TRAF2-208ENST00000482854 RIMBP3BA6NNM3 1639 aa25.89■■□□□ 1.74
TRAF2-208ENST00000482854 RIMBP3Q9UFD9 1639 aa25.89■■□□□ 1.74
TRAF2-208ENST00000482854 RAPGEF2Q9Y4G8 1499 aa25.77■■□□□ 1.72
TRAF2-208ENST00000482854 EEA1Q15075 1411 aa25.72■■□□□ 1.71
TRAF2-208ENST00000482854 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms