RNA–Protein interactions for RNA: ENST00000482800.5

APPL1-205, Transcript of adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, humanhuman

TSL 1 (best)

Gene APPL1, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1-205ENST00000482800 NISCHQ9Y2I1 1504 aa42.81■■■■■ 4.44
APPL1-205ENST00000482800 CCDC180Q9P1Z9 1646 aa37.51■■■■□ 3.6
APPL1-205ENST00000482800 ABCC9O60706 1549 aa36.37■■■■□ 3.41
APPL1-205ENST00000482800 DCAF8L2P0C7V8 631 aa35.85■■■■□ 3.33
APPL1-205ENST00000482800 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
APPL1-205ENST00000482800 DCAF1Q9Y4B6 1507 aa35.25■■■■□ 3.23
APPL1-205ENST00000482800 NACADO15069 1562 aa35.14■■■■□ 3.22
APPL1-205ENST00000482800 MYO15BQ96JP2 1530 aa35.06■■■■□ 3.2
APPL1-205ENST00000482800 RB1CC1Q8TDY2 1594 aa35.03■■■■□ 3.2
APPL1-205ENST00000482800 SHROOM4Q9ULL8 1493 aa34.7■■■■□ 3.15
APPL1-205ENST00000482800 SCRIBQ14160 1630 aa34.62■■■■□ 3.13
APPL1-205ENST00000482800 UNC13AQ9UPW8 1703 aa34.39■■■■□ 3.1
APPL1-205ENST00000482800 PABPN1Q86U42 306 aaKnown RBP eCLIP34.26■■■■□ 3.07
APPL1-205ENST00000482800 BICRAQ9NZM4 1560 aa34.09■■■■□ 3.05
APPL1-205ENST00000482800 CECR2Q9BXF3 1484 aa33.46■■■□□ 2.95
APPL1-205ENST00000482800 MROH2BQ7Z745 1585 aa33.13■■■□□ 2.89
APPL1-205ENST00000482800 EIF4G1Q04637 1599 aaKnown RBP33.1■■■□□ 2.89
APPL1-205ENST00000482800 BAZ1AQ9NRL2 1556 aaPredicted RBP33.06■■■□□ 2.88
APPL1-205ENST00000482800 SMARCA4P51532 1647 aa33.05■■■□□ 2.88
APPL1-205ENST00000482800 SUPT5HO00267 1087 aaKnown RBP33.01■■■□□ 2.88
APPL1-205ENST00000482800 RSF1Q96T23 1441 aaPredicted RBP33■■■□□ 2.87
APPL1-205ENST00000482800 DNAJC5BQ9UF47 199 aa32.85■■■□□ 2.85
APPL1-205ENST00000482800 WIZO95785 1651 aa32.83■■■□□ 2.85
APPL1-205ENST00000482800 CC2D2AQ9P2K1 1620 aa32.82■■■□□ 2.84
APPL1-205ENST00000482800 ATAD2BQ9ULI0 1458 aa32.71■■■□□ 2.83
APPL1-205ENST00000482800 PEG3Q9GZU2 1588 aa32.6■■■□□ 2.81
APPL1-205ENST00000482800 SMARCA2P51531 1590 aa32.58■■■□□ 2.81
APPL1-205ENST00000482800 NCAPD3P42695 1498 aa32.49■■■□□ 2.79
APPL1-205ENST00000482800 BAZ1BQ9UIG0 1483 aaKnown RBP32.47■■■□□ 2.79
APPL1-205ENST00000482800 TOP2AP11388 1531 aaKnown RBP32.35■■■□□ 2.77
APPL1-205ENST00000482800 HMGXB3Q12766 1538 aa32.34■■■□□ 2.77
APPL1-205ENST00000482800 CCDC88BA6NC98 1476 aa32.11■■■□□ 2.73
APPL1-205ENST00000482800 NESP48681 1621 aa31.74■■■□□ 2.67
APPL1-205ENST00000482800 CADPSQ9ULU8 1353 aa31.66■■■□□ 2.66
APPL1-205ENST00000482800 CFTRP13569 1480 aa31.61■■■□□ 2.65
APPL1-205ENST00000482800 LAMC3Q9Y6N6 1575 aa31.47■■■□□ 2.63
APPL1-205ENST00000482800 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.61
APPL1-205ENST00000482800 PRDM2Q13029 1718 aa31.29■■■□□ 2.6
APPL1-205ENST00000482800 PDS5BQ9NTI5 1447 aa31.28■■■□□ 2.6
APPL1-205ENST00000482800 ABCC8Q09428 1581 aa31.28■■■□□ 2.6
APPL1-205ENST00000482800 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
APPL1-205ENST00000482800 ERCC6Q03468 1493 aa31.19■■■□□ 2.58
APPL1-205ENST00000482800 CEP164Q9UPV0 1460 aa31.16■■■□□ 2.58
APPL1-205ENST00000482800 CHIC1Q5VXU3 224 aa31.14■■■□□ 2.58
APPL1-205ENST00000482800 WRNQ14191 1432 aaPredicted RBP eCLIP31.06■■■□□ 2.56
APPL1-205ENST00000482800 URB2Q14146 1524 aaKnown RBP31■■■□□ 2.55
APPL1-205ENST00000482800 CUX1P39880 1505 aa31■■■□□ 2.55
APPL1-205ENST00000482800 SYNJ1O43426 1573 aa30.99■■■□□ 2.55
APPL1-205ENST00000482800 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
APPL1-205ENST00000482800 MRC2Q9UBG0 1479 aa30.93■■■□□ 2.54
APPL1-205ENST00000482800 TOPBP1Q92547 1522 aa30.9■■■□□ 2.54
APPL1-205ENST00000482800 THOC2Q8NI27 1593 aaKnown RBP30.88■■■□□ 2.53
APPL1-205ENST00000482800 DNMBPQ6XZF7 1577 aa30.84■■■□□ 2.53
APPL1-205ENST00000482800 TOP2BQ02880 1626 aa30.83■■■□□ 2.53
APPL1-205ENST00000482800 WDR62O43379 1518 aa30.78■■■□□ 2.52
APPL1-205ENST00000482800 BIVM-ERCC5R4GMW8 1640 aa30.78■■■□□ 2.52
APPL1-205ENST00000482800 FGD5Q6ZNL6 1462 aa30.77■■■□□ 2.52
APPL1-205ENST00000482800 POLA1P09884 1462 aaPredicted RBP30.72■■■□□ 2.51
APPL1-205ENST00000482800 RAD54L2Q9Y4B4 1467 aa30.69■■■□□ 2.5
APPL1-205ENST00000482800 CUX2O14529 1486 aa30.63■■■□□ 2.49
APPL1-205ENST00000482800 SOGA1O94964 1423 aa30.61■■■□□ 2.49
APPL1-205ENST00000482800 FAM9AQ8IZU1 332 aaPredicted RBP30.55■■■□□ 2.48
APPL1-205ENST00000482800 RUSC2Q8N2Y8 1516 aa30.52■■■□□ 2.48
APPL1-205ENST00000482800 TARBP1Q13395 1621 aaKnown RBP30.48■■■□□ 2.47
APPL1-205ENST00000482800 TDRD9Q8NDG6 1382 aaKnown RBP30.47■■■□□ 2.47
APPL1-205ENST00000482800 ZNF608Q9ULD9 1512 aaPredicted RBP30.45■■■□□ 2.46
APPL1-205ENST00000482800 IFT140Q96RY7 1462 aa30.42■■■□□ 2.46
APPL1-205ENST00000482800 ABCA10Q8WWZ4 1543 aa30.41■■■□□ 2.46
APPL1-205ENST00000482800 AQRO60306 1485 aaKnown RBP eCLIP30.39■■■□□ 2.46
APPL1-205ENST00000482800 WDR97A6NE52 1622 aa30.35■■■□□ 2.45
APPL1-205ENST00000482800 KIF27Q86VH2 1401 aa30.3■■■□□ 2.44
APPL1-205ENST00000482800 EHMT2Q96KQ7 1210 aa30.27■■■□□ 2.44
APPL1-205ENST00000482800 GAPVD1Q14C86 1478 aa30.25■■■□□ 2.43
APPL1-205ENST00000482800 EIF4G3O43432 1585 aaKnown RBP30.22■■■□□ 2.43
APPL1-205ENST00000482800 ABCA5Q8WWZ7 1642 aa30.22■■■□□ 2.43
APPL1-205ENST00000482800 CSRNP3Q8WYN3 585 aa30.19■■■□□ 2.42
APPL1-205ENST00000482800 IGF1RP08069 1367 aa30.18■■■□□ 2.42
APPL1-205ENST00000482800 EEA1Q15075 1411 aa30.09■■■□□ 2.41
APPL1-205ENST00000482800 PBRM1Q86U86 1689 aa30.08■■■□□ 2.41
APPL1-205ENST00000482800 GRIN2BQ13224 1484 aa30.07■■■□□ 2.4
APPL1-205ENST00000482800 LOC105371045A0A1W2PR82 267 aa30.07■■■□□ 2.4
APPL1-205ENST00000482800 SNAPC4Q5SXM2 1469 aa30.02■■■□□ 2.4
APPL1-205ENST00000482800 ERICH3Q5RHP9 1530 aa30.01■■■□□ 2.39
APPL1-205ENST00000482800 CARMIL1Q5VZK9 1371 aa30■■■□□ 2.39
APPL1-205ENST00000482800 FBLN2P98095 1184 aa29.96■■■□□ 2.39
APPL1-205ENST00000482800 PRXQ9BXM0 1461 aa29.93■■■□□ 2.38
APPL1-205ENST00000482800 RAPGEF2Q9Y4G8 1499 aa29.92■■■□□ 2.38
APPL1-205ENST00000482800 ADAMTS12P58397 1594 aa29.88■■■□□ 2.37
APPL1-205ENST00000482800 MAGI1Q96QZ7 1491 aaPredicted RBP29.86■■■□□ 2.37
APPL1-205ENST00000482800 FHAD1B1AJZ9 1412 aa29.86■■■□□ 2.37
APPL1-205ENST00000482800 CHMP7Q8WUX9 453 aaPredicted RBP29.86■■■□□ 2.37
APPL1-205ENST00000482800 CUL7Q14999 1698 aa29.85■■■□□ 2.37
APPL1-205ENST00000482800 UBTFP17480 764 aaKnown RBP29.8■■■□□ 2.36
APPL1-205ENST00000482800 KIF21BO75037 1637 aa29.8■■■□□ 2.36
APPL1-205ENST00000482800 SYNJ2O15056 1496 aa29.79■■■□□ 2.36
APPL1-205ENST00000482800 GOLGA3Q08378 1498 aa29.74■■■□□ 2.35
APPL1-205ENST00000482800 GRIN2AQ12879 1464 aa29.73■■■□□ 2.35
APPL1-205ENST00000482800 CHD1O14646 1710 aa29.71■■■□□ 2.35
APPL1-205ENST00000482800 RANGAP1P46060 587 aaPredicted RBP29.71■■■□□ 2.35
APPL1-205ENST00000482800 CEP170Q5SW79 1584 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms