RNA–Protein interactions for RNA: ENST00000482243.1

TRAIP-207, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-207ENST00000482243 NISCHQ9Y2I1 1504 aa32.15■■■□□ 2.74
TRAIP-207ENST00000482243 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.1
TRAIP-207ENST00000482243 ZCCHC6Q5VYS8 1495 aaKnown RBP26.94■■□□□ 1.9
TRAIP-207ENST00000482243 ABCC9O60706 1549 aa26.77■■□□□ 1.88
TRAIP-207ENST00000482243 DCAF8L2P0C7V8 631 aa26.67■■□□□ 1.86
TRAIP-207ENST00000482243 DCAF1Q9Y4B6 1507 aa26.58■■□□□ 1.85
TRAIP-207ENST00000482243 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
TRAIP-207ENST00000482243 NACADO15069 1562 aa26.26■■□□□ 1.79
TRAIP-207ENST00000482243 SHROOM4Q9ULL8 1493 aa26.1■■□□□ 1.77
TRAIP-207ENST00000482243 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
TRAIP-207ENST00000482243 SCRIBQ14160 1630 aa25.85■■□□□ 1.73
TRAIP-207ENST00000482243 UNC13AQ9UPW8 1703 aa25.53■■□□□ 1.68
TRAIP-207ENST00000482243 BICRAQ9NZM4 1560 aa25.26■■□□□ 1.63
TRAIP-207ENST00000482243 PABPN1Q86U42 306 aaKnown RBP eCLIP25.21■■□□□ 1.63
TRAIP-207ENST00000482243 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
TRAIP-207ENST00000482243 CECR2Q9BXF3 1484 aa24.97■■□□□ 1.59
TRAIP-207ENST00000482243 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
TRAIP-207ENST00000482243 RSF1Q96T23 1441 aaPredicted RBP24.85■■□□□ 1.57
TRAIP-207ENST00000482243 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
TRAIP-207ENST00000482243 MROH2BQ7Z745 1585 aa24.81■■□□□ 1.56
TRAIP-207ENST00000482243 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
TRAIP-207ENST00000482243 WIZO95785 1651 aa24.62■■□□□ 1.53
TRAIP-207ENST00000482243 EIF4G1Q04637 1599 aaKnown RBP24.52■■□□□ 1.52
TRAIP-207ENST00000482243 PEG3Q9GZU2 1588 aa24.44■■□□□ 1.5
TRAIP-207ENST00000482243 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
TRAIP-207ENST00000482243 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
TRAIP-207ENST00000482243 TOP2AP11388 1531 aaKnown RBP24.36■■□□□ 1.49
TRAIP-207ENST00000482243 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
TRAIP-207ENST00000482243 CC2D2AQ9P2K1 1620 aa24.22■■□□□ 1.47
TRAIP-207ENST00000482243 NCAPD3P42695 1498 aa24.21■■□□□ 1.47
TRAIP-207ENST00000482243 HMGXB3Q12766 1538 aa24.16■■□□□ 1.46
TRAIP-207ENST00000482243 CCDC88BA6NC98 1476 aa24.11■■□□□ 1.45
TRAIP-207ENST00000482243 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
TRAIP-207ENST00000482243 DNAJC5Q9H3Z4 198 aa23.75■■□□□ 1.39
TRAIP-207ENST00000482243 CFTRP13569 1480 aa23.62■■□□□ 1.37
TRAIP-207ENST00000482243 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
TRAIP-207ENST00000482243 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
TRAIP-207ENST00000482243 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
TRAIP-207ENST00000482243 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
TRAIP-207ENST00000482243 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
TRAIP-207ENST00000482243 NESP48681 1621 aa23.42■■□□□ 1.34
TRAIP-207ENST00000482243 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
TRAIP-207ENST00000482243 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.33
TRAIP-207ENST00000482243 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
TRAIP-207ENST00000482243 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
TRAIP-207ENST00000482243 TOP2BQ02880 1626 aa23.25■■□□□ 1.31
TRAIP-207ENST00000482243 BIVM-ERCC5R4GMW8 1640 aa23.23■■□□□ 1.31
TRAIP-207ENST00000482243 CUX1P39880 1505 aa23.22■■□□□ 1.31
TRAIP-207ENST00000482243 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
TRAIP-207ENST00000482243 KIF21AQ7Z4S6 1674 aa23.16■■□□□ 1.3
TRAIP-207ENST00000482243 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
TRAIP-207ENST00000482243 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
TRAIP-207ENST00000482243 TOPBP1Q92547 1522 aa23.06■■□□□ 1.28
TRAIP-207ENST00000482243 SOGA1O94964 1423 aa23.04■■□□□ 1.28
TRAIP-207ENST00000482243 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
TRAIP-207ENST00000482243 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
TRAIP-207ENST00000482243 EEA1Q15075 1411 aa23■■□□□ 1.27
TRAIP-207ENST00000482243 ERCC6Q03468 1493 aa23■■□□□ 1.27
TRAIP-207ENST00000482243 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
TRAIP-207ENST00000482243 RUSC2Q8N2Y8 1516 aa22.97■■□□□ 1.27
TRAIP-207ENST00000482243 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
TRAIP-207ENST00000482243 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
TRAIP-207ENST00000482243 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
TRAIP-207ENST00000482243 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
TRAIP-207ENST00000482243 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
TRAIP-207ENST00000482243 WDR62O43379 1518 aa22.84■■□□□ 1.25
TRAIP-207ENST00000482243 CUX2O14529 1486 aa22.84■■□□□ 1.25
TRAIP-207ENST00000482243 THOC2Q8NI27 1593 aaKnown RBP22.81■■□□□ 1.24
TRAIP-207ENST00000482243 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
TRAIP-207ENST00000482243 ABCA10Q8WWZ4 1543 aa22.8■■□□□ 1.24
TRAIP-207ENST00000482243 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
TRAIP-207ENST00000482243 TARBP1Q13395 1621 aaKnown RBP22.71■■□□□ 1.23
TRAIP-207ENST00000482243 KIF21BO75037 1637 aa22.7■■□□□ 1.22
TRAIP-207ENST00000482243 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
TRAIP-207ENST00000482243 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
TRAIP-207ENST00000482243 IGF1RP08069 1367 aa22.66■■□□□ 1.22
TRAIP-207ENST00000482243 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
TRAIP-207ENST00000482243 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
TRAIP-207ENST00000482243 ABCA5Q8WWZ7 1642 aa22.62■■□□□ 1.21
TRAIP-207ENST00000482243 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
TRAIP-207ENST00000482243 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
TRAIP-207ENST00000482243 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
TRAIP-207ENST00000482243 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
TRAIP-207ENST00000482243 CARMIL1Q5VZK9 1371 aa22.56■■□□□ 1.2
TRAIP-207ENST00000482243 TNIKQ9UKE5 1360 aa22.56■■□□□ 1.2
TRAIP-207ENST00000482243 AQRO60306 1485 aaKnown RBP eCLIP22.53■■□□□ 1.26e-9■■■■■ 45.1
TRAIP-207ENST00000482243 CUL7Q14999 1698 aa22.52■■□□□ 1.2
TRAIP-207ENST00000482243 ZNF608Q9ULD9 1512 aaPredicted RBP22.52■■□□□ 1.2
TRAIP-207ENST00000482243 PBRM1Q86U86 1689 aa22.5■■□□□ 1.19
TRAIP-207ENST00000482243 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
TRAIP-207ENST00000482243 EIF4G3O43432 1585 aaKnown RBP22.45■■□□□ 1.18
TRAIP-207ENST00000482243 CEP162Q5TB80 1403 aa22.41■■□□□ 1.18
TRAIP-207ENST00000482243 FHAD1B1AJZ9 1412 aa22.37■■□□□ 1.17
TRAIP-207ENST00000482243 ADAMTS12P58397 1594 aa22.34■■□□□ 1.17
TRAIP-207ENST00000482243 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
TRAIP-207ENST00000482243 CLIP1P30622 1438 aa22.3■■□□□ 1.16
TRAIP-207ENST00000482243 MAGI1Q96QZ7 1491 aaPredicted RBP22.29■■□□□ 1.16
TRAIP-207ENST00000482243 RANGAP1P46060 587 aaPredicted RBP22.29■■□□□ 1.16
TRAIP-207ENST00000482243 CTTNBP2Q8WZ74 1663 aa22.25■■□□□ 1.15
TRAIP-207ENST00000482243 SYNJ2O15056 1496 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms